RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 A0A1W2PPZ6 126 aa11.38□□□□□ -0.59
SMU1-201ENST00000397149 NKX2-1P43699 371 aaPredicted RBP11.38□□□□□ -0.59
SMU1-201ENST00000397149 PITX1P78337 314 aaPredicted RBP11.38□□□□□ -0.59
SMU1-201ENST00000397149 GLYATL3Q5SZD4 288 aa11.38□□□□□ -0.59
SMU1-201ENST00000397149 VASH2Q86V25 355 aa11.38□□□□□ -0.59
SMU1-201ENST00000397149 PARP16Q8N5Y8 322 aa11.38□□□□□ -0.59
SMU1-201ENST00000397149 SLC7A6Q92536 515 aa11.38□□□□□ -0.59
SMU1-201ENST00000397149 NECTIN4Q96NY8 510 aa11.38□□□□□ -0.59
SMU1-201ENST00000397149 TRIB3Q96RU7 358 aa11.38□□□□□ -0.59
SMU1-201ENST00000397149 SARGQ9BW04 601 aa11.38□□□□□ -0.59
SMU1-201ENST00000397149 BET1LQ9NYM9 111 aa11.38□□□□□ -0.59
SMU1-201ENST00000397149 MYADML2A6NDP7 307 aa11.38□□□□□ -0.59
SMU1-201ENST00000397149 RAB40ALP0C0E4 278 aa11.38□□□□□ -0.59
SMU1-201ENST00000397149 SRPXP78539 464 aa11.38□□□□□ -0.59
SMU1-201ENST00000397149 SCGB1D4Q6XE38 83 aa11.38□□□□□ -0.59
SMU1-201ENST00000397149 PRSS45Q7RTY3 260 aa11.38□□□□□ -0.59
SMU1-201ENST00000397149 OR2AE1Q8NHA4 323 aa11.38□□□□□ -0.59
SMU1-201ENST00000397149 RAB40AQ8WXH6 277 aa11.38□□□□□ -0.59
SMU1-201ENST00000397149 MEX3AA1L020 520 aaKnown RBP11.38□□□□□ -0.59
SMU1-201ENST00000397149 UMAD1C9J7I0 102 aa11.38□□□□□ -0.59
SMU1-201ENST00000397149 RAB5AP20339 215 aa11.38□□□□□ -0.59
SMU1-201ENST00000397149 SLC35A1P78382 337 aa11.38□□□□□ -0.59
SMU1-201ENST00000397149 SYPL1Q16563 259 aa11.38□□□□□ -0.59
SMU1-201ENST00000397149 PGGHGQ32M88 737 aa11.38□□□□□ -0.59
SMU1-201ENST00000397149 GLIPR1L1Q6UWM5 242 aa11.38□□□□□ -0.59
SMU1-201ENST00000397149 AGBL5Q8NDL9 886 aa11.38□□□□□ -0.59
SMU1-201ENST00000397149 TMEM106AQ96A25 262 aa11.38□□□□□ -0.59
SMU1-201ENST00000397149 NME1P15531 152 aaKnown RBP11.37□□□□□ -0.59
SMU1-201ENST00000397149 ADRA2CP18825 462 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 MYF6P23409 242 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 PRDX4Q13162 271 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 PROX2Q3B8N5 592 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 ZNF528Q3MIS6 628 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 TEX261Q6UWH6 196 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 MISP3Q96FF7 219 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 KCND1Q9NSA2 647 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 ASH2LQ9UBL3 628 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 A0A1W2PPQ1 181 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 PRSS38A1L453 326 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 CDHR4A6H8M9 788 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 KCNAB3O43448 404 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 BMP5P22003 454 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 SHC1P29353 583 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 BPIFB3P59826 476 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 ZNF816Q0VGE8 651 aaPredicted RBP11.37□□□□□ -0.59
SMU1-201ENST00000397149 IRF4Q15306 451 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 C11orf91Q3C1V1 193 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 TIFABQ6ZNK6 161 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 GPRIN1Q7Z2K8 1008 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 PGBD5Q8N414 524 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 C4orf32Q8N8J7 132 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 TMEM163Q8TC26 289 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 EDEM2Q9BV94 578 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 HES4Q9HCC6 221 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 KCNG2Q9UJ96 466 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 HSPE1-MOB4S4R3N1 261 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 AIFM1O95831 613 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 GCGP01275 180 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 ANGPTL5Q86XS5 388 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 KCNG3Q8TAE7 436 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 RDH5Q92781 318 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 ZNF778Q96MU6 729 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 NPY6RQ99463 290 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 SEC22CQ9BRL7 303 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 HINT3Q9NQE9 182 aaKnown RBP11.37□□□□□ -0.59
SMU1-201ENST00000397149 TMEM221A6NGB7 291 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 CNMDO75829 334 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 CD38P28907 300 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 RFC3P40938 356 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 ETFDHQ16134 617 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 YRDCQ86U90 279 aaKnown RBP11.37□□□□□ -0.59
SMU1-201ENST00000397149 GLCCI1Q86VQ1 547 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 NAXDQ8IW45 347 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 OR5K2Q8NHB8 316 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 PIGQQ9BRB3 760 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 RSRP1Q9BUV0 290 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 ZC3H13Q5T200 1668 aaKnown RBP11.37□□□□□ -0.59
SMU1-201ENST00000397149 KLRC4-KLRK1H3BQV0 150 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 TNFRSF4P43489 277 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 TCTAP57738 103 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 LYRM7Q5U5X0 104 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 SIGLEC10Q96LC7 697 aa11.37□□□□□ -0.59
SMU1-201ENST00000397149 ACSS1Q9NUB1 689 aaPredicted RBP11.37□□□□□ -0.59
SMU1-201ENST00000397149 ZNF840PA6NDX5 716 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 SHISA7A6NL88 538 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 SELEP16581 610 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 C21orf33P30042 268 aaPredicted RBP11.36□□□□□ -0.59
SMU1-201ENST00000397149 DCDP81605 110 aaKnown RBP11.36□□□□□ -0.59
SMU1-201ENST00000397149 Q3ZCU0 254 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 RHOUQ7L0Q8 258 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 UBE3DQ7Z6J8 389 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 LINC00469Q8N7U9 141 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 PKMYT1Q99640 499 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 UQCC2Q9BRT2 126 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 IER2Q9BTL4 223 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 BTNL2Q9UIR0 455 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 DRD1P21728 446 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 RAB40BQ12829 278 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 SEZ6L2Q6UXD5 910 aa11.36□□□□□ -0.59
SMU1-201ENST00000397149 RXFP4Q8TDU9 374 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms