RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 A0A0U1RQS6 177 aa12.89□□□□□ -0.35
COL4A3-202ENST00000396578 TGOLN2O43493 480 aa12.89□□□□□ -0.35
COL4A3-202ENST00000396578 ALX3O95076 343 aa12.89□□□□□ -0.35
COL4A3-202ENST00000396578 GLB1P16278 677 aa12.89□□□□□ -0.35
COL4A3-202ENST00000396578 TACR1P25103 407 aa12.89□□□□□ -0.35
COL4A3-202ENST00000396578 NKX2-1P43699 371 aaPredicted RBP12.89□□□□□ -0.35
COL4A3-202ENST00000396578 PRDX1Q06830 199 aaKnown RBP12.89□□□□□ -0.35
COL4A3-202ENST00000396578 TRIM61Q5EBN2 209 aa12.89□□□□□ -0.35
COL4A3-202ENST00000396578 ACOT7LQ6ZUV0 252 aa12.89□□□□□ -0.35
COL4A3-202ENST00000396578 TMEM104Q8NE00 496 aa12.89□□□□□ -0.35
COL4A3-202ENST00000396578 NKX2-4Q9H2Z4 354 aa12.89□□□□□ -0.35
COL4A3-202ENST00000396578 PPP6CO00743 305 aa12.89□□□□□ -0.35
COL4A3-202ENST00000396578 ZNF90Q03938 601 aa12.89□□□□□ -0.35
COL4A3-202ENST00000396578 HES1Q14469 280 aa12.89□□□□□ -0.35
COL4A3-202ENST00000396578 CPEB2Q7Z5Q1 589 aaKnown RBP12.89□□□□□ -0.35
COL4A3-202ENST00000396578 LINC00346Q8IVM7 164 aa12.89□□□□□ -0.35
COL4A3-202ENST00000396578 OR5M11Q96RB7 305 aa12.89□□□□□ -0.35
COL4A3-202ENST00000396578 DDOQ99489 341 aa12.89□□□□□ -0.35
COL4A3-202ENST00000396578 MOB1AQ9H8S9 216 aa12.89□□□□□ -0.35
COL4A3-202ENST00000396578 OR2A25A4D2G3 310 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 CER1O95813 267 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 HNF1AP20823 631 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 RPL7L1Q6DKI1 246 aaKnown RBP12.88□□□□□ -0.35
COL4A3-202ENST00000396578 TBPL2Q6SJ96 375 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 ANGPTL5Q86XS5 388 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 OR4C5Q8NGB2 326 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 TMEM18Q96B42 140 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 EGLN2Q96KS0 407 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 GABRQQ9UN88 632 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 SCN3AQ9NY46 2000 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 EDDM3BP56851 147 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 CARD18P57730 90 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 TBC1D28Q2M2D7 210 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 C19orf35Q6ZS72 473 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 GNPNAT1Q96EK6 184 aaPredicted RBP12.88□□□□□ -0.35
COL4A3-202ENST00000396578 SEMA4CQ9C0C4 833 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 DNMT3BQ9UBC3 853 aaKnown RBP12.88□□□□□ -0.35
COL4A3-202ENST00000396578 STRAPQ9Y3F4 350 aaKnown RBP12.88□□□□□ -0.35
COL4A3-202ENST00000396578 A0A1B0GUL6 1792 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 DRGXA6NNA5 263 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 EIF1BO60739 113 aaKnown RBP12.88□□□□□ -0.35
COL4A3-202ENST00000396578 CALCBP10092 127 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 KDM4DQ6B0I6 523 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 TMEM255BQ8WV15 326 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 ST8SIA4Q92187 359 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 C12orf57Q99622 126 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 SYT17Q9BSW7 474 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 GSX2Q9BZM3 304 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 AMBRA1Q9C0C7 1298 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 OR51I2Q9H344 312 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 PRSS16Q9NQE7 514 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 SPP1P10451 314 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 MTHFD2P13995 350 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 ADRA2CP18825 462 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 KLHDC1Q8N7A1 406 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 GJC3Q8NFK1 279 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 SLC35E1Q96K37 410 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 TAAR2Q9P1P5 351 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 XKRY2A2RUG3 117 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 H0YGG7 62 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 RPUSD3Q6P087 351 aaKnown RBP12.88□□□□□ -0.35
COL4A3-202ENST00000396578 SLC7A6Q92536 515 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 SRRQ9GZT4 340 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 CHST8Q9H2A9 424 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 GDE1Q9NZC3 331 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 YTHDF2Q9Y5A9 579 aaKnown RBP12.88□□□□□ -0.35
COL4A3-202ENST00000396578 UBE2IP63279 158 aaKnown RBP12.88□□□□□ -0.35
COL4A3-202ENST00000396578 GDPD3Q7L5L3 318 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 PRSS45Q7RTY3 260 aa12.88□□□□□ -0.35
COL4A3-202ENST00000396578 ST8SIA3O43173 380 aa12.87□□□□□ -0.35
COL4A3-202ENST00000396578 GLCEO94923 617 aa12.87□□□□□ -0.35
COL4A3-202ENST00000396578 LGALS4P56470 323 aa12.87□□□□□ -0.35
COL4A3-202ENST00000396578 OR2B8PP59922 312 aa12.87□□□□□ -0.35
COL4A3-202ENST00000396578 CDK5Q00535 292 aa12.87□□□□□ -0.35
COL4A3-202ENST00000396578 NHSL2Q5HYW2 709 aa12.87□□□□□ -0.35
COL4A3-202ENST00000396578 C19orf47Q8N9M1 422 aaKnown RBP12.87□□□□□ -0.35
COL4A3-202ENST00000396578 RHBDD1Q8TEB9 315 aa12.87□□□□□ -0.35
COL4A3-202ENST00000396578 CPEP16870 476 aa12.87□□□□□ -0.35
COL4A3-202ENST00000396578 ENPP1P22413 925 aa12.87□□□□□ -0.35
COL4A3-202ENST00000396578 EIF1P41567 113 aaKnown RBP12.87□□□□□ -0.35
COL4A3-202ENST00000396578 GLIPR1L1Q6UWM5 242 aa12.87□□□□□ -0.35
COL4A3-202ENST00000396578 NDFIP1Q9BT67 221 aa12.87□□□□□ -0.35
COL4A3-202ENST00000396578 ZNF629Q9UEG4 869 aaPredicted RBP12.87□□□□□ -0.35
COL4A3-202ENST00000396578 A0A0A6YYJ9 748 aa12.87□□□□□ -0.35
COL4A3-202ENST00000396578 HS3ST1O14792 307 aa12.87□□□□□ -0.35
COL4A3-202ENST00000396578 SELENOFO60613 162 aa12.87□□□□□ -0.35
COL4A3-202ENST00000396578 TAS2R45P59539 299 aa12.87□□□□□ -0.35
COL4A3-202ENST00000396578 CPXM2Q8N436 756 aa12.87□□□□□ -0.35
COL4A3-202ENST00000396578 SEH1LQ96EE3 360 aa12.87□□□□□ -0.35
COL4A3-202ENST00000396578 TVP23CQ96ET8 276 aa12.87□□□□□ -0.35
COL4A3-202ENST00000396578 LINC00597Q9H2U6 94 aa12.87□□□□□ -0.35
COL4A3-202ENST00000396578 B3GALT5Q9Y2C3 310 aa12.87□□□□□ -0.35
COL4A3-202ENST00000396578 RAF1P04049 648 aa12.87□□□□□ -0.35
COL4A3-202ENST00000396578 CALCRP30988 508 aa12.87□□□□□ -0.35
COL4A3-202ENST00000396578 CRMP1Q14194 572 aa12.87□□□□□ -0.35
COL4A3-202ENST00000396578 TFAP2EQ6VUC0 442 aa12.87□□□□□ -0.35
COL4A3-202ENST00000396578 GDF7Q7Z4P5 450 aa12.87□□□□□ -0.35
COL4A3-202ENST00000396578 NUDT9Q9BW91 350 aa12.87□□□□□ -0.35
COL4A3-202ENST00000396578 TMEM38AQ9H6F2 299 aa12.87□□□□□ -0.35
COL4A3-202ENST00000396578 CHRM2P08172 466 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms