RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 STOMP27105 288 aa14.85□□□□□ -0.03
EXOSC3-202ENST00000396521 DAP3P51398 398 aaKnown RBP14.85□□□□□ -0.03
EXOSC3-202ENST00000396521 ZNF133P52736 654 aaPredicted RBP14.85□□□□□ -0.03
EXOSC3-202ENST00000396521 IL13RA1P78552 427 aa14.85□□□□□ -0.03
EXOSC3-202ENST00000396521 MBNL2Q5VZF2 373 aaKnown RBP14.85□□□□□ -0.03
EXOSC3-202ENST00000396521 ZER1Q7Z7L7 766 aa14.85□□□□□ -0.03
EXOSC3-202ENST00000396521 MSRB3Q8IXL7 192 aa14.85□□□□□ -0.03
EXOSC3-202ENST00000396521 LRRC17Q8N6Y2 441 aa14.85□□□□□ -0.03
EXOSC3-202ENST00000396521 C11orf65Q8NCR3 313 aa14.85□□□□□ -0.03
EXOSC3-202ENST00000396521 ICA1LQ8NDH6 482 aa14.85□□□□□ -0.03
EXOSC3-202ENST00000396521 SPDL1Q96EA4 605 aa14.85□□□□□ -0.03
EXOSC3-202ENST00000396521 MRPL13Q9BYD1 178 aaKnown RBP14.85□□□□□ -0.03
EXOSC3-202ENST00000396521 OR51B6Q9H340 312 aa14.85□□□□□ -0.03
EXOSC3-202ENST00000396521 CCNB1IP1Q9NPC3 277 aa14.85□□□□□ -0.03
EXOSC3-202ENST00000396521 NKIRAS1Q9NYS0 192 aa14.85□□□□□ -0.03
EXOSC3-202ENST00000396521 PLEK2Q9NYT0 353 aa14.85□□□□□ -0.03
EXOSC3-202ENST00000396521 A0A1W2PRG6 482 aa14.84□□□□□ -0.03
EXOSC3-202ENST00000396521 TRAPPC13A5PLN9 417 aa14.84□□□□□ -0.03
EXOSC3-202ENST00000396521 CLDN34H7C241 214 aa14.84□□□□□ -0.03
EXOSC3-202ENST00000396521 ASAH2BP0C7U1 165 aa14.84□□□□□ -0.03
EXOSC3-202ENST00000396521 TUBG1P23258 451 aa14.84□□□□□ -0.03
EXOSC3-202ENST00000396521 CPT2P23786 658 aa14.84□□□□□ -0.03
EXOSC3-202ENST00000396521 MMP15P51511 669 aa14.84□□□□□ -0.03
EXOSC3-202ENST00000396521 ERVS71-1P61550 626 aa14.84□□□□□ -0.03
EXOSC3-202ENST00000396521 MRPS34P82930 218 aaKnown RBP14.84□□□□□ -0.03
EXOSC3-202ENST00000396521 PDLIM3Q53GG5 364 aaPredicted RBP14.84□□□□□ -0.03
EXOSC3-202ENST00000396521 C10orf128Q5T292 105 aa14.84□□□□□ -0.03
EXOSC3-202ENST00000396521 EPGNQ6UW88 154 aa14.84□□□□□ -0.03
EXOSC3-202ENST00000396521 MAVSQ7Z434 540 aa14.84□□□□□ -0.03
EXOSC3-202ENST00000396521 NANOGNBQ7Z5D8 188 aa14.84□□□□□ -0.03
EXOSC3-202ENST00000396521 SLC30A8Q8IWU4 369 aa14.84□□□□□ -0.03
EXOSC3-202ENST00000396521 ALDH16A1Q8IZ83 802 aa14.84□□□□□ -0.03
EXOSC3-202ENST00000396521 SPICQ8N5J4 248 aa14.84□□□□□ -0.03
EXOSC3-202ENST00000396521 ADAMTS16Q8TE57 1224 aa14.84□□□□□ -0.03
EXOSC3-202ENST00000396521 SLC25A28Q96A46 364 aa14.84□□□□□ -0.03
EXOSC3-202ENST00000396521 LRRC58Q96CX6 371 aa14.84□□□□□ -0.03
EXOSC3-202ENST00000396521 ARHGDIGQ99819 225 aa14.84□□□□□ -0.03
EXOSC3-202ENST00000396521 ZNF426Q9BUY5 554 aa14.84□□□□□ -0.03
EXOSC3-202ENST00000396521 VIPAS39Q9H9C1 493 aa14.84□□□□□ -0.03
EXOSC3-202ENST00000396521 TUBG2Q9NRH3 451 aa14.84□□□□□ -0.03
EXOSC3-202ENST00000396521 VAPAQ9P0L0 249 aa14.84□□□□□ -0.03
EXOSC3-202ENST00000396521 PPIAL4AQ9Y536 164 aa14.84□□□□□ -0.03
EXOSC3-202ENST00000396521 TRBV5-3A0A0A0MS03 114 aa14.83□□□□□ -0.04
EXOSC3-202ENST00000396521 ISPDA4D126 451 aa14.83□□□□□ -0.04
EXOSC3-202ENST00000396521 MCIDASD6RGH6 385 aa14.83□□□□□ -0.04
EXOSC3-202ENST00000396521 POLR3GO15318 223 aaPredicted RBP14.83□□□□□ -0.04
EXOSC3-202ENST00000396521 ICMTO60725 284 aa14.83□□□□□ -0.04
EXOSC3-202ENST00000396521 IGF2P01344 180 aa14.83□□□□□ -0.04
EXOSC3-202ENST00000396521 IGHV1-46P01743 117 aa14.83□□□□□ -0.04
EXOSC3-202ENST00000396521 CD55P08174 381 aa14.83□□□□□ -0.04
EXOSC3-202ENST00000396521 AQP1P29972 269 aa14.83□□□□□ -0.04
EXOSC3-202ENST00000396521 GDI2P50395 445 aaKnown RBP14.83□□□□□ -0.04
EXOSC3-202ENST00000396521 PCBP3P57721 371 aaKnown RBP14.83□□□□□ -0.04
EXOSC3-202ENST00000396521 LCN2P80188 198 aa14.83□□□□□ -0.04
EXOSC3-202ENST00000396521 NPTX1Q15818 432 aa14.83□□□□□ -0.04
EXOSC3-202ENST00000396521 ARMCX4Q5H9R4 360 aa14.83□□□□□ -0.04
EXOSC3-202ENST00000396521 PABPC1L2AQ5JQF8 200 aa14.83□□□□□ -0.04
EXOSC3-202ENST00000396521 ENTPD8Q5MY95 495 aa14.83□□□□□ -0.04
EXOSC3-202ENST00000396521 ARL9Q6T311 187 aa14.83□□□□□ -0.04
EXOSC3-202ENST00000396521 KLHL36Q8N4N3 616 aa14.83□□□□□ -0.04
EXOSC3-202ENST00000396521 SIGLECL1Q8N7X8 197 aa14.83□□□□□ -0.04
EXOSC3-202ENST00000396521 NOXO1Q8NFA2 376 aa14.83□□□□□ -0.04
EXOSC3-202ENST00000396521 MARS2Q96GW9 593 aaKnown RBP14.83□□□□□ -0.04
EXOSC3-202ENST00000396521 SLITRK2Q9H156 845 aa14.83□□□□□ -0.04
EXOSC3-202ENST00000396521 PCDHAC1Q9H158 963 aa14.83□□□□□ -0.04
EXOSC3-202ENST00000396521 UBAP1Q9NZ09 502 aa14.83□□□□□ -0.04
EXOSC3-202ENST00000396521 SLAMF8Q9P0V8 285 aa14.83□□□□□ -0.04
EXOSC3-202ENST00000396521 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.83□□□□□ -0.04
EXOSC3-202ENST00000396521 PURGQ9UJV8 347 aaKnown RBP14.83□□□□□ -0.04
EXOSC3-202ENST00000396521 AUP1Q9Y679 476 aa14.83□□□□□ -0.04
EXOSC3-202ENST00000396521 CACNG2Q9Y698 323 aa14.83□□□□□ -0.04
EXOSC3-202ENST00000396521 NPIPB13A6NJU9 1138 aa14.82□□□□□ -0.04
EXOSC3-202ENST00000396521 NPIPB4C9JG80 1138 aa14.82□□□□□ -0.04
EXOSC3-202ENST00000396521 BLOC1S5-TXNDC5H3BN57 136 aa14.82□□□□□ -0.04
EXOSC3-202ENST00000396521 SPRY3O43610 288 aa14.82□□□□□ -0.04
EXOSC3-202ENST00000396521 UMPSP11172 480 aa14.82□□□□□ -0.04
EXOSC3-202ENST00000396521 ACADSP16219 412 aa14.82□□□□□ -0.04
EXOSC3-202ENST00000396521 MAKP20794 623 aa14.82□□□□□ -0.04
EXOSC3-202ENST00000396521 CCNOP22674 350 aa14.82□□□□□ -0.04
EXOSC3-202ENST00000396521 GUCA1AP43080 201 aaPredicted RBP14.82□□□□□ -0.04
EXOSC3-202ENST00000396521 MELKQ14680 651 aa14.82□□□□□ -0.04
EXOSC3-202ENST00000396521 OCLNQ16625 522 aa14.82□□□□□ -0.04
EXOSC3-202ENST00000396521 DUSP7Q16829 419 aa14.82□□□□□ -0.04
EXOSC3-202ENST00000396521 TMEM155Q4W5P6 130 aa14.82□□□□□ -0.04
EXOSC3-202ENST00000396521 THEM4Q5T1C6 240 aa14.82□□□□□ -0.04
EXOSC3-202ENST00000396521 TREML4Q6UXN2 200 aa14.82□□□□□ -0.04
EXOSC3-202ENST00000396521 PATL1Q86TB9 770 aaKnown RBP14.82□□□□□ -0.04
EXOSC3-202ENST00000396521 FUNDC1Q8IVP5 155 aa14.82□□□□□ -0.04
EXOSC3-202ENST00000396521 C10orf111Q8N326 155 aa14.82□□□□□ -0.04
EXOSC3-202ENST00000396521 LRRC18Q8N456 261 aa14.82□□□□□ -0.04
EXOSC3-202ENST00000396521 SMYD1Q8NB12 490 aa14.82□□□□□ -0.04
EXOSC3-202ENST00000396521 DEFB108BQ8NET1 73 aa14.82□□□□□ -0.04
EXOSC3-202ENST00000396521 OR6T1Q8NGN1 323 aa14.82□□□□□ -0.04
EXOSC3-202ENST00000396521 FNDC8Q8TC99 324 aa14.82□□□□□ -0.04
EXOSC3-202ENST00000396521 KLF14Q8TD94 323 aaPredicted RBP14.82□□□□□ -0.04
EXOSC3-202ENST00000396521 RASSF5Q8WWW0 418 aa14.82□□□□□ -0.04
EXOSC3-202ENST00000396521 C22orf15Q8WYQ4 148 aa14.82□□□□□ -0.04
EXOSC3-202ENST00000396521 POM121L2Q96KW2 1035 aa14.82□□□□□ -0.04
EXOSC3-202ENST00000396521 ZNF347Q96SE7 839 aa14.82□□□□□ -0.04
EXOSC3-202ENST00000396521 WFDC6Q9BQY6 131 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms