RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 OTPQ5XKR4 325 aa18.07■□□□□ 0.48
VCPKMT-202ENST00000395860 ZNF585AQ6P3V2 769 aa18.07■□□□□ 0.48
VCPKMT-202ENST00000395860 SSX6Q7RTT6 188 aa18.07■□□□□ 0.48
VCPKMT-202ENST00000395860 DPY19L4Q7Z388 723 aa18.07■□□□□ 0.48
VCPKMT-202ENST00000395860 FGD2Q7Z6J4 655 aa18.07■□□□□ 0.48
VCPKMT-202ENST00000395860 GPR137CQ8N3F9 429 aa18.07■□□□□ 0.48
VCPKMT-202ENST00000395860 SPRYD4Q8WW59 207 aaPredicted RBP18.07■□□□□ 0.48
VCPKMT-202ENST00000395860 MNTQ99583 582 aa18.07■□□□□ 0.48
VCPKMT-202ENST00000395860 SEC61A2Q9H9S3 476 aa18.07■□□□□ 0.48
VCPKMT-202ENST00000395860 B3GAT2Q9NPZ5 323 aa18.07■□□□□ 0.48
VCPKMT-202ENST00000395860 LAMP5Q9UJQ1 280 aa18.07■□□□□ 0.48
VCPKMT-202ENST00000395860 ZMIZ1Q9ULJ6 1067 aa18.07■□□□□ 0.48
VCPKMT-202ENST00000395860 GTF3C1Q12789 2109 aa18.07■□□□□ 0.48
VCPKMT-202ENST00000395860 CCDC160A6NGH7 325 aa18.07■□□□□ 0.48
VCPKMT-202ENST00000395860 H3BSA7 217 aa18.07■□□□□ 0.48
VCPKMT-202ENST00000395860 SPARCP09486 303 aa18.07■□□□□ 0.48
VCPKMT-202ENST00000395860 RPS27P42677 84 aaKnown RBP18.07■□□□□ 0.48
VCPKMT-202ENST00000395860 ZNF133P52736 654 aaPredicted RBP18.07■□□□□ 0.48
VCPKMT-202ENST00000395860 ZNF322Q6U7Q0 402 aaPredicted RBP18.07■□□□□ 0.48
VCPKMT-202ENST00000395860 OR10H5Q8NGA6 315 aa18.07■□□□□ 0.48
VCPKMT-202ENST00000395860 MRPL48Q96GC5 212 aaKnown RBP18.07■□□□□ 0.48
VCPKMT-202ENST00000395860 MYCBPQ99417 103 aaPredicted RBP18.07■□□□□ 0.48
VCPKMT-202ENST00000395860 FAM192AQ9GZU8 254 aa18.07■□□□□ 0.48
VCPKMT-202ENST00000395860 SLC25A18Q9H1K4 315 aa18.07■□□□□ 0.48
VCPKMT-202ENST00000395860 TMEM14AQ9Y6G1 99 aa18.07■□□□□ 0.48
VCPKMT-202ENST00000395860 PHF3Q92576 2039 aaKnown RBP18.06■□□□□ 0.48
VCPKMT-202ENST00000395860 UPK3AO75631 287 aa18.06■□□□□ 0.48
VCPKMT-202ENST00000395860 HRGP04196 525 aa18.06■□□□□ 0.48
VCPKMT-202ENST00000395860 ACTA2P62736 377 aa18.06■□□□□ 0.48
VCPKMT-202ENST00000395860 ACTG2P63267 376 aa18.06■□□□□ 0.48
VCPKMT-202ENST00000395860 DOC2BQ14184 412 aa18.06■□□□□ 0.48
VCPKMT-202ENST00000395860 SF3B4Q15427 424 aaKnown RBP eCLIP18.06■□□□□ 0.48
VCPKMT-202ENST00000395860 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.06■□□□□ 0.48
VCPKMT-202ENST00000395860 CLVS1Q8IUQ0 354 aaPredicted RBP18.06■□□□□ 0.48
VCPKMT-202ENST00000395860 SNX33Q8WV41 574 aa18.06■□□□□ 0.48
VCPKMT-202ENST00000395860 C11orf40Q8WZ69 217 aa18.06■□□□□ 0.48
VCPKMT-202ENST00000395860 RBM24Q9BX46 236 aaKnown RBP18.06■□□□□ 0.48
VCPKMT-202ENST00000395860 ISG20L2Q9H9L3 353 aaKnown RBP18.06■□□□□ 0.48
VCPKMT-202ENST00000395860 GP6Q9HCN6 339 aa18.06■□□□□ 0.48
VCPKMT-202ENST00000395860 MED12LQ86YW9 2145 aa18.05■□□□□ 0.48
VCPKMT-202ENST00000395860 DHHO43323 396 aa18.05■□□□□ 0.48
VCPKMT-202ENST00000395860 TPOP07202 933 aa18.05■□□□□ 0.48
VCPKMT-202ENST00000395860 GUCA1AP43080 201 aaPredicted RBP18.05■□□□□ 0.48
VCPKMT-202ENST00000395860 ZNF84P51523 738 aa18.05■□□□□ 0.48
VCPKMT-202ENST00000395860 KLRB1Q12918 225 aa18.05■□□□□ 0.48
VCPKMT-202ENST00000395860 MLLT11Q13015 90 aaPredicted RBP18.05■□□□□ 0.48
VCPKMT-202ENST00000395860 GPR107Q5VW38 600 aa18.05■□□□□ 0.48
VCPKMT-202ENST00000395860 FOXB2Q5VYV0 432 aa18.05■□□□□ 0.48
VCPKMT-202ENST00000395860 ZNF485Q8NCK3 441 aa18.05■□□□□ 0.48
VCPKMT-202ENST00000395860 OTOSQ8NHW6 89 aa18.05■□□□□ 0.48
VCPKMT-202ENST00000395860 THEM6Q8WUY1 208 aa18.05■□□□□ 0.48
VCPKMT-202ENST00000395860 SNRNP40Q96DI7 357 aaKnown RBP18.05■□□□□ 0.48
VCPKMT-202ENST00000395860 C4orf36Q96KX1 117 aa18.05■□□□□ 0.48
VCPKMT-202ENST00000395860 SLCO5A1Q9H2Y9 848 aa18.05■□□□□ 0.48
VCPKMT-202ENST00000395860 GLRX2Q9NS18 164 aa18.05■□□□□ 0.48
VCPKMT-202ENST00000395860 KCNG2Q9UJ96 466 aa18.05■□□□□ 0.48
VCPKMT-202ENST00000395860 CEPT1Q9Y6K0 416 aa18.05■□□□□ 0.48
VCPKMT-202ENST00000395860 ARHGAP21Q5T5U3 1957 aa18.05■□□□□ 0.48
VCPKMT-202ENST00000395860 J3QLW9 94 aa18.04■□□□□ 0.48
VCPKMT-202ENST00000395860 PHYHO14832 338 aa18.04■□□□□ 0.48
VCPKMT-202ENST00000395860 KRT33AO76009 404 aa18.04■□□□□ 0.48
VCPKMT-202ENST00000395860 MT-ND5P03915 603 aa18.04■□□□□ 0.48
VCPKMT-202ENST00000395860 PSKH1P11801 424 aa18.04■□□□□ 0.48
VCPKMT-202ENST00000395860 ZNF19P17023 458 aa18.04■□□□□ 0.48
VCPKMT-202ENST00000395860 CDAP32320 146 aa18.04■□□□□ 0.48
VCPKMT-202ENST00000395860 LIPAP38571 399 aa18.04■□□□□ 0.48
VCPKMT-202ENST00000395860 TDGF1P3P51864 188 aa18.04■□□□□ 0.48
VCPKMT-202ENST00000395860 ACSF3Q4G176 576 aaPredicted RBP18.04■□□□□ 0.48
VCPKMT-202ENST00000395860 C19orf48Q6RUI8 117 aa18.04■□□□□ 0.48
VCPKMT-202ENST00000395860 GMPPAQ96IJ6 420 aaPredicted RBP18.04■□□□□ 0.48
VCPKMT-202ENST00000395860 OPALINQ96PE5 141 aa18.04■□□□□ 0.48
VCPKMT-202ENST00000395860 ALKBH3Q96Q83 286 aaPredicted RBP18.04■□□□□ 0.48
VCPKMT-202ENST00000395860 CDADC1Q9BWV3 514 aa18.04■□□□□ 0.48
VCPKMT-202ENST00000395860 KLHDC2Q9Y2U9 406 aa18.04■□□□□ 0.48
VCPKMT-202ENST00000395860 ATMQ13315 3056 aa18.04■□□□□ 0.48
VCPKMT-202ENST00000395860 TMCC2O75069 709 aa18.04■□□□□ 0.48
VCPKMT-202ENST00000395860 SCG5P05408 212 aa18.04■□□□□ 0.48
VCPKMT-202ENST00000395860 ALOX5APP20292 161 aa18.04■□□□□ 0.48
VCPKMT-202ENST00000395860 AGTR1P30556 359 aa18.04■□□□□ 0.48
VCPKMT-202ENST00000395860 OR12D2P58182 307 aa18.04■□□□□ 0.48
VCPKMT-202ENST00000395860 TSTQ16762 297 aaKnown RBP18.04■□□□□ 0.48
VCPKMT-202ENST00000395860 CDONQ4KMG0 1287 aa18.04■□□□□ 0.48
VCPKMT-202ENST00000395860 TP53I3Q53FA7 332 aa18.04■□□□□ 0.48
VCPKMT-202ENST00000395860 KLBQ86Z14 1044 aa18.04■□□□□ 0.48
VCPKMT-202ENST00000395860 WNT2BQ93097 391 aa18.04■□□□□ 0.48
VCPKMT-202ENST00000395860 APH1AQ96BI3 265 aa18.04■□□□□ 0.48
VCPKMT-202ENST00000395860 RBM38Q9H0Z9 239 aaKnown RBP18.04■□□□□ 0.48
VCPKMT-202ENST00000395860 CRLF2Q9HC73 371 aa18.04■□□□□ 0.48
VCPKMT-202ENST00000395860 UGT2A1Q9Y4X1 527 aa18.04■□□□□ 0.48
VCPKMT-202ENST00000395860 OR6C65A6NJZ3 312 aa18.03■□□□□ 0.48
VCPKMT-202ENST00000395860 SFTPCP11686 197 aa18.03■□□□□ 0.48
VCPKMT-202ENST00000395860 GABRA1P14867 456 aa18.03■□□□□ 0.48
VCPKMT-202ENST00000395860 ABOP16442 354 aa18.03■□□□□ 0.48
VCPKMT-202ENST00000395860 CD36P16671 472 aa18.03■□□□□ 0.48
VCPKMT-202ENST00000395860 EIF2B1Q14232 305 aaKnown RBP18.03■□□□□ 0.48
VCPKMT-202ENST00000395860 TEX30Q5JUR7 227 aa18.03■□□□□ 0.48
VCPKMT-202ENST00000395860 RIPPLY2Q5TAB7 128 aa18.03■□□□□ 0.48
VCPKMT-202ENST00000395860 TSPO2Q5TGU0 170 aa18.03■□□□□ 0.48
VCPKMT-202ENST00000395860 SLC18B1Q6NT16 456 aa18.03■□□□□ 0.48
VCPKMT-202ENST00000395860 RPTNQ6XPR3 784 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms