RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 OR11A1Q9GZK7 315 aa12.03□□□□□ -0.48
NFKB1-202ENST00000394820 EIF5A2Q9GZV4 153 aaKnown RBP12.03□□□□□ -0.48
NFKB1-202ENST00000394820 KIR3DX1Q9H7L2 352 aa12.03□□□□□ -0.48
NFKB1-202ENST00000394820 OR5H14A6NHG9 310 aa12.02□□□□□ -0.48
NFKB1-202ENST00000394820 TMEM200CA6NKL6 621 aa12.02□□□□□ -0.48
NFKB1-202ENST00000394820 C5orf67F2Z3F1 127 aa12.02□□□□□ -0.48
NFKB1-202ENST00000394820 AIPO00170 330 aa12.02□□□□□ -0.48
NFKB1-202ENST00000394820 SDCBPO00560 298 aaPredicted RBP12.02□□□□□ -0.48
NFKB1-202ENST00000394820 ZNF254O75437 659 aa12.02□□□□□ -0.48
NFKB1-202ENST00000394820 HNRNPA2B1P22626 353 aaKnown RBP12.02□□□□□ -0.48
NFKB1-202ENST00000394820 TACR3P29371 465 aa12.02□□□□□ -0.48
NFKB1-202ENST00000394820 C1QL3Q5VWW1 255 aa12.02□□□□□ -0.48
NFKB1-202ENST00000394820 NR4A3Q92570 626 aa12.02□□□□□ -0.48
NFKB1-202ENST00000394820 TOMM40LQ969M1 308 aa12.02□□□□□ -0.48
NFKB1-202ENST00000394820 SERINC2Q96SA4 455 aa12.02□□□□□ -0.48
NFKB1-202ENST00000394820 ARHGDIGQ99819 225 aa12.02□□□□□ -0.48
NFKB1-202ENST00000394820 MCOLN1Q9GZU1 580 aa12.02□□□□□ -0.48
NFKB1-202ENST00000394820 CHRDQ9H2X0 955 aa12.02□□□□□ -0.48
NFKB1-202ENST00000394820 P2RY10O00398 339 aa12.02□□□□□ -0.49
NFKB1-202ENST00000394820 ERGP11308 486 aa12.02□□□□□ -0.49
NFKB1-202ENST00000394820 EBPQ15125 230 aaKnown RBP12.02□□□□□ -0.49
NFKB1-202ENST00000394820 ALG11Q2TAA5 492 aa12.02□□□□□ -0.49
NFKB1-202ENST00000394820 SLC51BQ86UW2 128 aa12.02□□□□□ -0.49
NFKB1-202ENST00000394820 BANF2Q9H503 90 aa12.02□□□□□ -0.49
NFKB1-202ENST00000394820 FLRT3Q9NZU0 649 aa12.02□□□□□ -0.49
NFKB1-202ENST00000394820 CPNE7Q9UBL6 633 aa12.02□□□□□ -0.49
NFKB1-202ENST00000394820 ATPIF1Q9UII2 106 aa12.02□□□□□ -0.49
NFKB1-202ENST00000394820 LSM5Q9Y4Y9 91 aaKnown RBP12.02□□□□□ -0.49
NFKB1-202ENST00000394820 ZNF20P17024 532 aa12.02□□□□□ -0.49
NFKB1-202ENST00000394820 CDKN2AP42771 156 aaKnown RBP12.02□□□□□ -0.49
NFKB1-202ENST00000394820 TRA2BP62995 288 aaKnown RBP12.02□□□□□ -0.49
NFKB1-202ENST00000394820 DYRK1AQ13627 763 aa12.02□□□□□ -0.49
NFKB1-202ENST00000394820 ETFDHQ16134 617 aa12.02□□□□□ -0.49
NFKB1-202ENST00000394820 CBLN3Q6UW01 205 aa12.02□□□□□ -0.49
NFKB1-202ENST00000394820 GLDNQ6ZMI3 551 aaPredicted RBP12.02□□□□□ -0.49
NFKB1-202ENST00000394820 PEG10Q86TG7 708 aaKnown RBP12.02□□□□□ -0.49
NFKB1-202ENST00000394820 GVQW1Q8N7I0 195 aa12.02□□□□□ -0.49
NFKB1-202ENST00000394820 BPIFCQ8NFQ6 507 aa12.02□□□□□ -0.49
NFKB1-202ENST00000394820 PPP1R1CQ8WVI7 109 aa12.02□□□□□ -0.49
NFKB1-202ENST00000394820 APOBEC4Q8WW27 367 aaKnown RBP12.02□□□□□ -0.49
NFKB1-202ENST00000394820 ZC3HAV1LQ96H79 300 aaKnown RBP12.02□□□□□ -0.49
NFKB1-202ENST00000394820 KCNJ15Q99712 375 aa12.02□□□□□ -0.49
NFKB1-202ENST00000394820 ISYNA1Q9NPH2 558 aa12.02□□□□□ -0.49
NFKB1-202ENST00000394820 DZANK1Q9NVP4 752 aa12.02□□□□□ -0.49
NFKB1-202ENST00000394820 C2orf42Q9NWW7 574 aa12.02□□□□□ -0.49
NFKB1-202ENST00000394820 TAS2R4Q9NYW5 299 aa12.02□□□□□ -0.49
NFKB1-202ENST00000394820 NCOR1O75376 2440 aa12.02□□□□□ -0.49
NFKB1-202ENST00000394820 A0A1W2PQF6 199 aa12.01□□□□□ -0.49
NFKB1-202ENST00000394820 BHLHE40O14503 412 aa12.01□□□□□ -0.49
NFKB1-202ENST00000394820 ZNF208O43345 1280 aa12.01□□□□□ -0.49
NFKB1-202ENST00000394820 HCRTR1O43613 425 aa12.01□□□□□ -0.49
NFKB1-202ENST00000394820 H2BFMP0C1H6 154 aa12.01□□□□□ -0.49
NFKB1-202ENST00000394820 ICAM2P13598 275 aa12.01□□□□□ -0.49
NFKB1-202ENST00000394820 FAM53BQ14153 422 aa12.01□□□□□ -0.49
NFKB1-202ENST00000394820 ZIC1Q15915 447 aa12.01□□□□□ -0.49
NFKB1-202ENST00000394820 SLC37A2Q8TED4 501 aa12.01□□□□□ -0.49
NFKB1-202ENST00000394820 DPYSL5Q9BPU6 564 aa12.01□□□□□ -0.49
NFKB1-202ENST00000394820 NKX6-2Q9C056 277 aaPredicted RBP12.01□□□□□ -0.49
NFKB1-202ENST00000394820 ZNF700Q9H0M5 742 aa12.01□□□□□ -0.49
NFKB1-202ENST00000394820 LINC00862A6NCI5 91 aa12.01□□□□□ -0.49
NFKB1-202ENST00000394820 RBM34P42696 430 aaKnown RBP12.01□□□□□ -0.49
NFKB1-202ENST00000394820 RIDAP52758 137 aaKnown RBP12.01□□□□□ -0.49
NFKB1-202ENST00000394820 PRSS12P56730 875 aa12.01□□□□□ -0.49
NFKB1-202ENST00000394820 CLEC9AQ6UXN8 241 aa12.01□□□□□ -0.49
NFKB1-202ENST00000394820 Q6ZS52 159 aa12.01□□□□□ -0.49
NFKB1-202ENST00000394820 MED25Q71SY5 747 aa12.01□□□□□ -0.49
NFKB1-202ENST00000394820 KLHL15Q96M94 604 aa12.01□□□□□ -0.49
NFKB1-202ENST00000394820 MOGAT1Q96PD6 335 aa12.01□□□□□ -0.49
NFKB1-202ENST00000394820 DHCR7Q9UBM7 475 aaKnown RBP12.01□□□□□ -0.49
NFKB1-202ENST00000394820 MOKQ9UQ07 419 aa12.01□□□□□ -0.49
NFKB1-202ENST00000394820 SLC22A23A1A5C7 686 aa12.01□□□□□ -0.49
NFKB1-202ENST00000394820 NAP1L6A6NFF2 107 aa12.01□□□□□ -0.49
NFKB1-202ENST00000394820 C17orf105B2RV13 164 aa12.01□□□□□ -0.49
NFKB1-202ENST00000394820 PPM1BO75688 479 aa12.01□□□□□ -0.49
NFKB1-202ENST00000394820 SEMA4FO95754 770 aa12.01□□□□□ -0.49
NFKB1-202ENST00000394820 IGHA1P01876 353 aa12.01□□□□□ -0.49
NFKB1-202ENST00000394820 NMBP08949 121 aa12.01□□□□□ -0.49
NFKB1-202ENST00000394820 GIPP09681 153 aaPredicted RBP12.01□□□□□ -0.49
NFKB1-202ENST00000394820 ZNF136P52737 540 aa12.01□□□□□ -0.49
NFKB1-202ENST00000394820 MFSD13AQ14CX5 517 aa12.01□□□□□ -0.49
NFKB1-202ENST00000394820 AWAT2Q6E213 333 aa12.01□□□□□ -0.49
NFKB1-202ENST00000394820 CST11Q9H112 138 aa12.01□□□□□ -0.49
NFKB1-202ENST00000394820 CD207Q9UJ71 328 aa12.01□□□□□ -0.49
NFKB1-202ENST00000394820 ACAD8Q9UKU7 415 aa12.01□□□□□ -0.49
NFKB1-202ENST00000394820 EXOGQ9Y2C4 368 aaKnown RBP12.01□□□□□ -0.49
NFKB1-202ENST00000394820 RHBDD3Q9Y3P4 386 aa12.01□□□□□ -0.49
NFKB1-202ENST00000394820 KCNJ13O60928 360 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 ZNF205O95201 554 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 MPZL1O95297 269 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 CSF1P09603 554 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 VSIG10L2P0DP72 767 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 BTCP35070 178 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 DIO1P49895 249 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 HHEXQ03014 270 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 ZP2Q05996 745 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 ARHGAP11BQ3KRB8 267 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 TRAPPC6BQ86SZ2 158 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 NANPQ8TBE9 248 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 SLC41A2Q96JW4 573 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 TAS2R5Q9NYW4 299 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms