RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 TMEM89A2RUT3 159 aa14.89□□□□□ -0.03
SNRPA1-202ENST00000394082 CLDN25C9JDP6 229 aa14.89□□□□□ -0.03
SNRPA1-202ENST00000394082 MCIDASD6RGH6 385 aa14.89□□□□□ -0.03
SNRPA1-202ENST00000394082 H3BSA7 217 aa14.89□□□□□ -0.03
SNRPA1-202ENST00000394082 KPNA4O00629 521 aaPredicted RBP14.89□□□□□ -0.03
SNRPA1-202ENST00000394082 TRMUO75648 421 aaKnown RBP14.89□□□□□ -0.03
SNRPA1-202ENST00000394082 ADH4P08319 380 aa14.89□□□□□ -0.03
SNRPA1-202ENST00000394082 THRBP10828 461 aa14.89□□□□□ -0.03
SNRPA1-202ENST00000394082 FUT1P19526 365 aa14.89□□□□□ -0.03
SNRPA1-202ENST00000394082 EPHA1P21709 976 aa14.89□□□□□ -0.03
SNRPA1-202ENST00000394082 LIPAP38571 399 aa14.89□□□□□ -0.03
SNRPA1-202ENST00000394082 LIMS1P48059 325 aa14.89□□□□□ -0.03
SNRPA1-202ENST00000394082 CRYBA2P53672 197 aa14.89□□□□□ -0.03
SNRPA1-202ENST00000394082 ERVS71-1P61550 626 aa14.89□□□□□ -0.03
SNRPA1-202ENST00000394082 NFYCQ13952 458 aa14.89□□□□□ -0.03
SNRPA1-202ENST00000394082 HFEQ30201 348 aa14.89□□□□□ -0.03
SNRPA1-202ENST00000394082 ARMC4Q5T2S8 1044 aa14.89□□□□□ -0.03
SNRPA1-202ENST00000394082 METTL21CQ5VZV1 264 aa14.89□□□□□ -0.03
SNRPA1-202ENST00000394082 C1QL2Q7Z5L3 287 aa14.89□□□□□ -0.03
SNRPA1-202ENST00000394082 CPEB3Q8NE35 698 aaKnown RBP14.89□□□□□ -0.03
SNRPA1-202ENST00000394082 OR10A6Q8NH74 314 aa14.89□□□□□ -0.03
SNRPA1-202ENST00000394082 NMD3Q96D46 503 aaKnown RBP14.89□□□□□ -0.03
SNRPA1-202ENST00000394082 ATP6V1G3Q96LB4 118 aa14.89□□□□□ -0.03
SNRPA1-202ENST00000394082 SH3GL1Q99961 368 aa14.89□□□□□ -0.03
SNRPA1-202ENST00000394082 SIKE1Q9BRV8 207 aa14.89□□□□□ -0.03
SNRPA1-202ENST00000394082 RBM4Q9BWF3 364 aaKnown RBP14.89□□□□□ -0.03
SNRPA1-202ENST00000394082 NANOGQ9H9S0 305 aa14.89□□□□□ -0.03
SNRPA1-202ENST00000394082 SAP30LQ9HAJ7 183 aa14.89□□□□□ -0.03
SNRPA1-202ENST00000394082 INIPQ9NRY2 104 aa14.89□□□□□ -0.03
SNRPA1-202ENST00000394082 DECR2Q9NUI1 292 aa14.89□□□□□ -0.03
SNRPA1-202ENST00000394082 ARGLU1Q9NWB6 273 aaPredicted RBP14.89□□□□□ -0.03
SNRPA1-202ENST00000394082 BAG5Q9UL15 447 aa14.89□□□□□ -0.03
SNRPA1-202ENST00000394082 TRIM77I1YAP6 450 aa14.88□□□□□ -0.03
SNRPA1-202ENST00000394082 PLPP2O43688 288 aa14.88□□□□□ -0.03
SNRPA1-202ENST00000394082 CDC14BO60729 498 aa14.88□□□□□ -0.03
SNRPA1-202ENST00000394082 OR7A10O76100 309 aa14.88□□□□□ -0.03
SNRPA1-202ENST00000394082 OR5F1O95221 314 aa14.88□□□□□ -0.03
SNRPA1-202ENST00000394082 MPZL1O95297 269 aa14.88□□□□□ -0.03
SNRPA1-202ENST00000394082 IGHV2-5P01817 119 aa14.88□□□□□ -0.03
SNRPA1-202ENST00000394082 F13BP05160 661 aa14.88□□□□□ -0.03
SNRPA1-202ENST00000394082 DRD4P21917 467 aa14.88□□□□□ -0.03
SNRPA1-202ENST00000394082 STOMP27105 288 aa14.88□□□□□ -0.03
SNRPA1-202ENST00000394082 HSF2Q03933 536 aa14.88□□□□□ -0.03
SNRPA1-202ENST00000394082 TAF11Q15544 211 aa14.88□□□□□ -0.03
SNRPA1-202ENST00000394082 ALKBH6Q3KRA9 238 aa14.88□□□□□ -0.03
SNRPA1-202ENST00000394082 ZNF718Q3SXZ3 478 aa14.88□□□□□ -0.03
SNRPA1-202ENST00000394082 PABPC1L2AQ5JQF8 200 aa14.88□□□□□ -0.03
SNRPA1-202ENST00000394082 MBNL2Q5VZF2 373 aaKnown RBP14.88□□□□□ -0.03
SNRPA1-202ENST00000394082 USP51Q70EK9 711 aa14.88□□□□□ -0.03
SNRPA1-202ENST00000394082 OR1J1Q8NGS3 322 aa14.88□□□□□ -0.03
SNRPA1-202ENST00000394082 FNDC8Q8TC99 324 aa14.88□□□□□ -0.03
SNRPA1-202ENST00000394082 DYDC1Q8WWB3 177 aa14.88□□□□□ -0.03
SNRPA1-202ENST00000394082 RAB1CQ92928 201 aa14.88□□□□□ -0.03
SNRPA1-202ENST00000394082 ELMOD3Q96FG2 381 aa14.88□□□□□ -0.03
SNRPA1-202ENST00000394082 TIMD4Q96H15 378 aa14.88□□□□□ -0.03
SNRPA1-202ENST00000394082 POM121L2Q96KW2 1035 aa14.88□□□□□ -0.03
SNRPA1-202ENST00000394082 TMPRSS13Q9BYE2 586 aa14.88□□□□□ -0.03
SNRPA1-202ENST00000394082 CYSLTR2Q9NS75 346 aa14.88□□□□□ -0.03
SNRPA1-202ENST00000394082 MRGBPQ9NV56 204 aa14.88□□□□□ -0.03
SNRPA1-202ENST00000394082 WIPI2Q9Y4P8 454 aa14.88□□□□□ -0.03
SNRPA1-202ENST00000394082 PPIAL4EA0A075B759 164 aa14.87□□□□□ -0.03
SNRPA1-202ENST00000394082 PPIAL4CA0A0B4J2A2 164 aa14.87□□□□□ -0.03
SNRPA1-202ENST00000394082 PPIAL4DF5H284 164 aa14.87□□□□□ -0.03
SNRPA1-202ENST00000394082 NPPAP01160 153 aa14.87□□□□□ -0.03
SNRPA1-202ENST00000394082 AVPP01185 164 aa14.87□□□□□ -0.03
SNRPA1-202ENST00000394082 PPIAL4FP0DN26 164 aa14.87□□□□□ -0.03
SNRPA1-202ENST00000394082 ZNF81P51508 661 aa14.87□□□□□ -0.03
SNRPA1-202ENST00000394082 MMP15P51511 669 aa14.87□□□□□ -0.03
SNRPA1-202ENST00000394082 MVKQ03426 396 aa14.87□□□□□ -0.03
SNRPA1-202ENST00000394082 SLC3A1Q07837 685 aa14.87□□□□□ -0.03
SNRPA1-202ENST00000394082 FAM27BQ5VT28 67 aa14.87□□□□□ -0.03
SNRPA1-202ENST00000394082 LRRC18Q8N456 261 aa14.87□□□□□ -0.03
SNRPA1-202ENST00000394082 SYT14Q8NB59 555 aa14.87□□□□□ -0.03
SNRPA1-202ENST00000394082 TMEM239Q8WW34 195 aa14.87□□□□□ -0.03
SNRPA1-202ENST00000394082 NABP1Q96AH0 204 aa14.87□□□□□ -0.03
SNRPA1-202ENST00000394082 SGTBQ96EQ0 304 aa14.87□□□□□ -0.03
SNRPA1-202ENST00000394082 MARS2Q96GW9 593 aaKnown RBP14.87□□□□□ -0.03
SNRPA1-202ENST00000394082 DIRC2Q96SL1 478 aa14.87□□□□□ -0.03
SNRPA1-202ENST00000394082 SUCNR1Q9BXA5 334 aa14.87□□□□□ -0.03
SNRPA1-202ENST00000394082 PLA2G12AQ9BZM1 189 aa14.87□□□□□ -0.03
SNRPA1-202ENST00000394082 OR51B6Q9H340 312 aa14.87□□□□□ -0.03
SNRPA1-202ENST00000394082 CCNB1IP1Q9NPC3 277 aa14.87□□□□□ -0.03
SNRPA1-202ENST00000394082 EIF3KQ9UBQ5 218 aaKnown RBP14.87□□□□□ -0.03
SNRPA1-202ENST00000394082 UGT2A1Q9Y4X1 527 aa14.87□□□□□ -0.03
SNRPA1-202ENST00000394082 GCH1P30793 250 aa14.86□□□□□ -0.03
SNRPA1-202ENST00000394082 AQP2P41181 271 aa14.86□□□□□ -0.03
SNRPA1-202ENST00000394082 ACTG1P63261 375 aa14.86□□□□□ -0.03
SNRPA1-202ENST00000394082 CYLC2Q14093 348 aaPredicted RBP14.86□□□□□ -0.03
SNRPA1-202ENST00000394082 NANOGP8Q6NSW7 305 aa14.86□□□□□ -0.03
SNRPA1-202ENST00000394082 PEG10Q86TG7 708 aaKnown RBP14.86□□□□□ -0.03
SNRPA1-202ENST00000394082 CALHM3Q86XJ0 350 aa14.86□□□□□ -0.03
SNRPA1-202ENST00000394082 NKAIN4Q8IVV8 208 aa14.86□□□□□ -0.03
SNRPA1-202ENST00000394082 OR8J3Q8NGG0 315 aa14.86□□□□□ -0.03
SNRPA1-202ENST00000394082 SGMS2Q8NHU3 365 aa14.86□□□□□ -0.03
SNRPA1-202ENST00000394082 NANPQ8TBE9 248 aa14.86□□□□□ -0.03
SNRPA1-202ENST00000394082 MAGEB18Q96M61 343 aa14.86□□□□□ -0.03
SNRPA1-202ENST00000394082 WACQ9BTA9 647 aa14.86□□□□□ -0.03
SNRPA1-202ENST00000394082 ALG12Q9BV10 488 aa14.86□□□□□ -0.03
SNRPA1-202ENST00000394082 TXNIPQ9H3M7 391 aa14.86□□□□□ -0.03
SNRPA1-202ENST00000394082 INTS9Q9NV88 658 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms