RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 TRAV36DV7A0A075B6V5 113 aa17■□□□□ 0.31
CBX1-202ENST00000393408 PNPP00491 289 aa17■□□□□ 0.31
CBX1-202ENST00000393408 HLA-DQA2P01906 255 aa17■□□□□ 0.31
CBX1-202ENST00000393408 CD3DP04234 171 aa17■□□□□ 0.31
CBX1-202ENST00000393408 PPP3CBP16298 524 aa17■□□□□ 0.31
CBX1-202ENST00000393408 CXCR1P25024 350 aa17■□□□□ 0.31
CBX1-202ENST00000393408 TEX30Q5JUR7 227 aa17■□□□□ 0.31
CBX1-202ENST00000393408 POMZP3Q6PJE2 187 aa17■□□□□ 0.31
CBX1-202ENST00000393408 ZNF679Q8IYX0 411 aa17■□□□□ 0.31
CBX1-202ENST00000393408 FAM160A2Q8N612 972 aaPredicted RBP17■□□□□ 0.31
CBX1-202ENST00000393408 RNF128Q8TEB7 428 aa17■□□□□ 0.31
CBX1-202ENST00000393408 SCARB1Q8WTV0 552 aa17■□□□□ 0.31
CBX1-202ENST00000393408 ASB17Q8WXJ9 295 aa17■□□□□ 0.31
CBX1-202ENST00000393408 ADIPOR1Q96A54 375 aa17■□□□□ 0.31
CBX1-202ENST00000393408 FOXN4Q96NZ1 517 aa17■□□□□ 0.31
CBX1-202ENST00000393408 FXYD6-FXYD2A0A087WZ82 144 aa16.99■□□□□ 0.31
CBX1-202ENST00000393408 ARPC4-TTLL3A0A0A6YYG9 625 aa16.99■□□□□ 0.31
CBX1-202ENST00000393408 TMEM272A0A1B0GTI8 110 aa16.99■□□□□ 0.31
CBX1-202ENST00000393408 C17orf51A8MQB3 221 aa16.99■□□□□ 0.31
CBX1-202ENST00000393408 HCRTR2O43614 444 aa16.99■□□□□ 0.31
CBX1-202ENST00000393408 WNT11O96014 354 aa16.99■□□□□ 0.31
CBX1-202ENST00000393408 GABRA1P14867 456 aa16.99■□□□□ 0.31
CBX1-202ENST00000393408 BLKP51451 505 aa16.99■□□□□ 0.31
CBX1-202ENST00000393408 SSBP1Q04837 148 aaKnown RBP16.99■□□□□ 0.31
CBX1-202ENST00000393408 MPPED2Q15777 294 aa16.99■□□□□ 0.31
CBX1-202ENST00000393408 ALKAL2Q6UX46 152 aa16.99■□□□□ 0.31
CBX1-202ENST00000393408 KRT77Q7Z794 578 aa16.99■□□□□ 0.31
CBX1-202ENST00000393408 TMEM151BQ8IW70 566 aa16.99■□□□□ 0.31
CBX1-202ENST00000393408 GPX8Q8TED1 209 aa16.99■□□□□ 0.31
CBX1-202ENST00000393408 METTL21AQ8WXB1 218 aa16.99■□□□□ 0.31
CBX1-202ENST00000393408 LINC00052Q96N35 136 aa16.99■□□□□ 0.31
CBX1-202ENST00000393408 FXYD6Q9H0Q3 95 aa16.99■□□□□ 0.31
CBX1-202ENST00000393408 MRPL22Q9NWU5 206 aaKnown RBP16.99■□□□□ 0.31
CBX1-202ENST00000393408 EPHA6Q9UF33 1036 aa16.99■□□□□ 0.31
CBX1-202ENST00000393408 MRTO4Q9UKD2 239 aaKnown RBP16.99■□□□□ 0.31
CBX1-202ENST00000393408 PRSS37A4D1T9 235 aa16.99■□□□□ 0.31
CBX1-202ENST00000393408 RAD1O60671 282 aa16.99■□□□□ 0.31
CBX1-202ENST00000393408 MAOBP27338 520 aa16.99■□□□□ 0.31
CBX1-202ENST00000393408 TAGLNQ01995 201 aaKnown RBP16.99■□□□□ 0.31
CBX1-202ENST00000393408 TOMM20Q15388 145 aa16.99■□□□□ 0.31
CBX1-202ENST00000393408 STEAP1BQ6NZ63 245 aa16.99■□□□□ 0.31
CBX1-202ENST00000393408 CHRDL2Q6WN34 429 aa16.99■□□□□ 0.31
CBX1-202ENST00000393408 ZNF519Q8TB69 540 aa16.99■□□□□ 0.31
CBX1-202ENST00000393408 DVL3Q92997 716 aaPredicted RBP16.99■□□□□ 0.31
CBX1-202ENST00000393408 PPP1R14AQ96A00 147 aa16.99■□□□□ 0.31
CBX1-202ENST00000393408 SLC25A28Q96A46 364 aa16.99■□□□□ 0.31
CBX1-202ENST00000393408 CHST6Q9GZX3 395 aa16.99■□□□□ 0.31
CBX1-202ENST00000393408 ARL6Q9H0F7 186 aa16.99■□□□□ 0.31
CBX1-202ENST00000393408 CYP8B1Q9UNU6 501 aa16.99■□□□□ 0.31
CBX1-202ENST00000393408 WISP1O95388 367 aa16.98■□□□□ 0.31
CBX1-202ENST00000393408 PLGP00747 810 aaPredicted RBP16.98■□□□□ 0.31
CBX1-202ENST00000393408 IGKV3-11P04433 115 aa16.98■□□□□ 0.31
CBX1-202ENST00000393408 PRKACBP22694 351 aa16.98■□□□□ 0.31
CBX1-202ENST00000393408 MAP2K6P52564 334 aa16.98■□□□□ 0.31
CBX1-202ENST00000393408 SHHQ15465 462 aa16.98■□□□□ 0.31
CBX1-202ENST00000393408 SLC18B1Q6NT16 456 aa16.98■□□□□ 0.31
CBX1-202ENST00000393408 TSSK4Q6SA08 328 aa16.98■□□□□ 0.31
CBX1-202ENST00000393408 MAMDC2Q7Z304 686 aaPredicted RBP16.98■□□□□ 0.31
CBX1-202ENST00000393408 NAXDQ8IW45 347 aa16.98■□□□□ 0.31
CBX1-202ENST00000393408 CPAMD8Q8IZJ3 1885 aa16.98■□□□□ 0.31
CBX1-202ENST00000393408 OR1J4Q8NGS1 313 aa16.98■□□□□ 0.31
CBX1-202ENST00000393408 COQ8AQ8NI60 647 aa16.98■□□□□ 0.31
CBX1-202ENST00000393408 TNFAIP8L1Q8WVP5 186 aa16.98■□□□□ 0.31
CBX1-202ENST00000393408 PTDSS2Q9BVG9 487 aa16.98■□□□□ 0.31
CBX1-202ENST00000393408 ATG5Q9H1Y0 275 aa16.98■□□□□ 0.31
CBX1-202ENST00000393408 EXO5Q9H790 373 aa16.98■□□□□ 0.31
CBX1-202ENST00000393408 SOHLH2Q9NX45 425 aa16.98■□□□□ 0.31
CBX1-202ENST00000393408 FITM1A5D6W6 292 aa16.98■□□□□ 0.31
CBX1-202ENST00000393408 ITGB2P05107 769 aa16.98■□□□□ 0.31
CBX1-202ENST00000393408 FCER2P06734 321 aa16.98■□□□□ 0.31
CBX1-202ENST00000393408 FASLGP48023 281 aa16.98■□□□□ 0.31
CBX1-202ENST00000393408 CENPAP49450 140 aa16.98■□□□□ 0.31
CBX1-202ENST00000393408 RPL27P61353 136 aaKnown RBP16.98■□□□□ 0.31
CBX1-202ENST00000393408 INSM1Q01101 510 aaPredicted RBP16.98■□□□□ 0.31
CBX1-202ENST00000393408 ROM1Q03395 351 aa16.98■□□□□ 0.31
CBX1-202ENST00000393408 MFGE8Q08431 387 aaPredicted RBP16.98■□□□□ 0.31
CBX1-202ENST00000393408 ACKR1Q16570 336 aa16.98■□□□□ 0.31
CBX1-202ENST00000393408 ARHGAP40Q5TG30 622 aa16.98■□□□□ 0.31
CBX1-202ENST00000393408 PXDC1Q5TGL8 231 aa16.98■□□□□ 0.31
CBX1-202ENST00000393408 TMEM225Q6GV28 225 aa16.98■□□□□ 0.31
CBX1-202ENST00000393408 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.98■□□□□ 0.31
CBX1-202ENST00000393408 PLPP7Q8NBV4 271 aa16.98■□□□□ 0.31
CBX1-202ENST00000393408 OR8S1Q8NH09 359 aa16.98■□□□□ 0.31
CBX1-202ENST00000393408 TSLPQ969D9 159 aa16.98■□□□□ 0.31
CBX1-202ENST00000393408 C8orf44Q96CB5 159 aa16.98■□□□□ 0.31
CBX1-202ENST00000393408 GAL3ST4Q96RP7 486 aa16.98■□□□□ 0.31
CBX1-202ENST00000393408 NKX3-1Q99801 234 aaPredicted RBP16.98■□□□□ 0.31
CBX1-202ENST00000393408 PPA2Q9H2U2 334 aa16.98■□□□□ 0.31
CBX1-202ENST00000393408 C1orf198Q9H425 327 aa16.98■□□□□ 0.31
CBX1-202ENST00000393408 TMEM138Q9NPI0 162 aa16.98■□□□□ 0.31
CBX1-202ENST00000393408 MED11Q9P086 117 aa16.98■□□□□ 0.31
CBX1-202ENST00000393408 CD207Q9UJ71 328 aa16.98■□□□□ 0.31
CBX1-202ENST00000393408 GTF2A1LQ9UNN4 478 aa16.98■□□□□ 0.31
CBX1-202ENST00000393408 IGLV1-36A0A0B4J1U3 117 aa16.97■□□□□ 0.31
CBX1-202ENST00000393408 IGHV5-51A0A0C4DH38 117 aa16.97■□□□□ 0.31
CBX1-202ENST00000393408 DDAH2O95865 285 aa16.97■□□□□ 0.31
CBX1-202ENST00000393408 MELTFP08582 738 aa16.97■□□□□ 0.31
CBX1-202ENST00000393408 HOXD4P09016 255 aaPredicted RBP16.97■□□□□ 0.31
CBX1-202ENST00000393408 SPARCP09486 303 aa16.97■□□□□ 0.31
CBX1-202ENST00000393408 GFERP55789 205 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms