RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 TMEM205Q6UW68 189 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 LINC00575Q6W349 94 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 STAC2Q6ZMT1 411 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 LRRC74BQ6ZQY2 392 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 ACOT7LQ6ZUV0 252 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 C2orf91Q6ZV80 131 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 LYZL2Q7Z4W2 148 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 VMO1Q7Z5L0 202 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 RANBP3LQ86VV4 465 aaPredicted RBP-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 ERO1BQ86YB8 467 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 GRAMD2AQ8IUY3 354 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 PRR15Q8IV56 129 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 FAM219AQ8IW50 185 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 BBS7Q8IWZ6 715 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 HOMEZQ8IX15 550 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 FTSJ3Q8IY81 847 aaKnown RBP-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 ZNF595Q8IYB9 648 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 TBC1D21Q8IYX1 336 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 CACNA2D3Q8IZS8 1091 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 HS3ST5Q8IZT8 346 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 FAM58AQ8N1B3 248 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 TTC30BQ8N4P2 665 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 MINDY1Q8N5J2 469 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 C3orf22Q8N5N4 141 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 EID2Q8N6I1 236 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 TMEM185AQ8NFB2 350 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 OR4F17Q8NGA8 305 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 OR52H1Q8NGJ2 320 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 OR6K6Q8NGW6 343 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 OR4S2Q8NH73 311 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 SGMS2Q8NHU3 365 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 NCOA7Q8NI08 942 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 TTC8Q8TAM2 541 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 NDNFQ8TB73 568 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 URGCPQ8TCY9 931 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 ST7LQ8TDW4 575 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 APH1BQ8WW43 257 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 GEMIN6Q8WXD5 167 aaKnown RBP-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 BORCS5Q969J3 196 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 PTX4Q96A99 478 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 LRRC59Q96AG4 307 aaKnown RBP-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 TMEM186Q96B77 213 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 NXNL1Q96CM4 212 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 ZBTB10Q96DT7 871 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 MRPL38Q96DV4 380 aaKnown RBP-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 MRPL53Q96EL3 112 aaKnown RBP-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 C14orf79Q96F83 325 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 SDSLQ96GA7 329 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 FAHD2AQ96GK7 314 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 SMARCD1Q96GM5 515 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 PGAM5Q96HS1 289 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 APOPT1Q96IL0 206 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 MS4A14Q96JA4 679 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 COG3Q96JB2 828 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 ELMO2Q96JJ3 720 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 SPATA33Q96N06 139 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 TTC25Q96NG3 672 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 ERMAPQ96PL5 475 aaPredicted RBP-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 VPS35Q96QK1 796 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 OR4F4Q96R69 305 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 NR1H4Q96RI1 486 aaPredicted RBP-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 TSPAN18Q96SJ8 248 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 S1PR3Q99500 378 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 FEVQ99581 238 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 TIMM17AQ99595 171 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 HSD17B10Q99714 261 aaKnown RBP-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 SSX3Q99909 188 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 ZNF426Q9BUY5 554 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 NTMT1Q9BV86 223 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 GABARAPL3Q9BY60 117 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 POTEKPQ9BYX7 375 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 FGF23Q9GZV9 251 aaPredicted RBP-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 ATG10Q9H0Y0 220 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 VCX2Q9H322 139 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 PPDPFQ9H3Y8 114 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 OSGEPL1Q9H4B0 414 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 TRABDQ9H4I3 376 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 SH2D4AQ9H788 454 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 VCPKMTQ9H867 229 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 ECT2Q9H8V3 914 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 CNOT10Q9H9A5 744 aaKnown RBP-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 CYP3A43Q9HB55 503 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 RDH14Q9HBH5 336 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 VCX3AQ9NNX9 186 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 DNAJC4Q9NNZ3 241 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 IL26Q9NPH9 171 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 OR2S2Q9NQN1 319 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 YAE1D1Q9NRH1 226 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 FAM49BQ9NUQ9 324 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 PAK1IP1Q9NWT1 392 aaPredicted RBP-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 B3GNT2Q9NY97 397 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 PSD3Q9NYI0 1048 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 TECRQ9NZ01 308 aaKnown RBP-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 TBC1D7Q9P0N9 293 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 MIOXQ9UGB7 285 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 SEC63Q9UGP8 760 aaKnown RBP-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 SLC24A2Q9UI40 661 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 NAGKQ9UJ70 344 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 PLA2G4CQ9UP65 541 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 PSG8Q9UQ74 426 aa-0.61□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms