RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 IGHV3-13P01766 116 aa13.6□□□□□ -0.23
VCX3A-201ENST00000381089 PGA4P0DJD7 388 aa13.6□□□□□ -0.23
VCX3A-201ENST00000381089 PGA3P0DJD8 388 aa13.6□□□□□ -0.23
VCX3A-201ENST00000381089 UMPSP11172 480 aa13.6□□□□□ -0.23
VCX3A-201ENST00000381089 CCNOP22674 350 aa13.6□□□□□ -0.23
VCX3A-201ENST00000381089 GLO1Q04760 184 aa13.6□□□□□ -0.23
VCX3A-201ENST00000381089 MELKQ14680 651 aa13.6□□□□□ -0.23
VCX3A-201ENST00000381089 ZNF74Q16587 644 aa13.6□□□□□ -0.23
VCX3A-201ENST00000381089 ZNF718Q3SXZ3 478 aa13.6□□□□□ -0.23
VCX3A-201ENST00000381089 SPDL1Q96EA4 605 aa13.6□□□□□ -0.23
VCX3A-201ENST00000381089 RSPO3Q9BXY4 272 aaPredicted RBP13.6□□□□□ -0.23
VCX3A-201ENST00000381089 ESM1Q9NQ30 184 aa13.6□□□□□ -0.23
VCX3A-201ENST00000381089 CYSLTR2Q9NS75 346 aa13.6□□□□□ -0.23
VCX3A-201ENST00000381089 TAS2R5Q9NYW4 299 aa13.6□□□□□ -0.23
VCX3A-201ENST00000381089 EIF3KQ9UBQ5 218 aaKnown RBP13.6□□□□□ -0.23
VCX3A-201ENST00000381089 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.6□□□□□ -0.23
VCX3A-201ENST00000381089 PPIAL4AQ9Y536 164 aa13.6□□□□□ -0.23
VCX3A-201ENST00000381089 GMEB1Q9Y692 573 aa13.6□□□□□ -0.23
VCX3A-201ENST00000381089 A0A1W2PRG6 482 aa13.59□□□□□ -0.23
VCX3A-201ENST00000381089 MCIDASD6RGH6 385 aa13.59□□□□□ -0.23
VCX3A-201ENST00000381089 TMPRSS2O15393 492 aa13.59□□□□□ -0.23
VCX3A-201ENST00000381089 TPST2O60704 377 aa13.59□□□□□ -0.23
VCX3A-201ENST00000381089 FOXH1O75593 365 aa13.59□□□□□ -0.23
VCX3A-201ENST00000381089 HKR1P10072 659 aa13.59□□□□□ -0.23
VCX3A-201ENST00000381089 LIPAP38571 399 aa13.59□□□□□ -0.23
VCX3A-201ENST00000381089 MRPL19P49406 292 aaKnown RBP13.59□□□□□ -0.23
VCX3A-201ENST00000381089 ZMAT1Q5H9K5 638 aa13.59□□□□□ -0.23
VCX3A-201ENST00000381089 ARMCX4Q5H9R4 360 aa13.59□□□□□ -0.23
VCX3A-201ENST00000381089 LINC00114Q6XXX2 140 aa13.59□□□□□ -0.23
VCX3A-201ENST00000381089 NANOGNBQ7Z5D8 188 aa13.59□□□□□ -0.23
VCX3A-201ENST00000381089 MSRB3Q8IXL7 192 aa13.59□□□□□ -0.23
VCX3A-201ENST00000381089 C1orf174Q8IYL3 243 aa13.59□□□□□ -0.23
VCX3A-201ENST00000381089 SMYD1Q8NB12 490 aa13.59□□□□□ -0.23
VCX3A-201ENST00000381089 C22orf15Q8WYQ4 148 aa13.59□□□□□ -0.23
VCX3A-201ENST00000381089 CCT8L2Q96SF2 557 aa13.59□□□□□ -0.23
VCX3A-201ENST00000381089 GPA33Q99795 319 aa13.59□□□□□ -0.23
VCX3A-201ENST00000381089 SLC19A3Q9BZV2 496 aa13.59□□□□□ -0.23
VCX3A-201ENST00000381089 CCNB1IP1Q9NPC3 277 aa13.59□□□□□ -0.23
VCX3A-201ENST00000381089 UBAP1Q9NZ09 502 aa13.59□□□□□ -0.23
VCX3A-201ENST00000381089 VAPAQ9P0L0 249 aa13.59□□□□□ -0.23
VCX3A-201ENST00000381089 STX18Q9P2W9 335 aaKnown RBP13.59□□□□□ -0.23
VCX3A-201ENST00000381089 CGGBP1Q9UFW8 167 aaPredicted RBP13.59□□□□□ -0.23
VCX3A-201ENST00000381089 PPIAL4EA0A075B759 164 aa13.58□□□□□ -0.24
VCX3A-201ENST00000381089 PPIAL4CA0A0B4J2A2 164 aa13.58□□□□□ -0.24
VCX3A-201ENST00000381089 CPSF4LA6NMK7 179 aaKnown RBP13.58□□□□□ -0.24
VCX3A-201ENST00000381089 CENPBD1B2RD01 187 aa13.58□□□□□ -0.24
VCX3A-201ENST00000381089 PPIAL4DF5H284 164 aa13.58□□□□□ -0.24
VCX3A-201ENST00000381089 M0R3H8 397 aa13.58□□□□□ -0.24
VCX3A-201ENST00000381089 SPRY3O43610 288 aa13.58□□□□□ -0.24
VCX3A-201ENST00000381089 PPIAL4FP0DN26 164 aa13.58□□□□□ -0.24
VCX3A-201ENST00000381089 GPX2P18283 190 aa13.58□□□□□ -0.24
VCX3A-201ENST00000381089 ATP4BP51164 291 aa13.58□□□□□ -0.24
VCX3A-201ENST00000381089 LCN2P80188 198 aa13.58□□□□□ -0.24
VCX3A-201ENST00000381089 AGKQ53H12 422 aa13.58□□□□□ -0.24
VCX3A-201ENST00000381089 ENTPD8Q5MY95 495 aa13.58□□□□□ -0.24
VCX3A-201ENST00000381089 BLOC1S3Q6QNY0 202 aa13.58□□□□□ -0.24
VCX3A-201ENST00000381089 LRRC18Q8N456 261 aa13.58□□□□□ -0.24
VCX3A-201ENST00000381089 C11orf65Q8NCR3 313 aa13.58□□□□□ -0.24
VCX3A-201ENST00000381089 POP5Q969H6 163 aaKnown RBP13.58□□□□□ -0.24
VCX3A-201ENST00000381089 MCHR2Q969V1 340 aa13.58□□□□□ -0.24
VCX3A-201ENST00000381089 MPP4Q96JB8 637 aa13.58□□□□□ -0.24
VCX3A-201ENST00000381089 DIRC2Q96SL1 478 aa13.58□□□□□ -0.24
VCX3A-201ENST00000381089 ARHGDIGQ99819 225 aa13.58□□□□□ -0.24
VCX3A-201ENST00000381089 CCDC167Q9P0B6 97 aa13.58□□□□□ -0.24
VCX3A-201ENST00000381089 SLAMF8Q9P0V8 285 aa13.58□□□□□ -0.24
VCX3A-201ENST00000381089 CACNG2Q9Y698 323 aa13.58□□□□□ -0.24
VCX3A-201ENST00000381089 TRAPPC13A5PLN9 417 aa13.57□□□□□ -0.24
VCX3A-201ENST00000381089 BLOC1S5-TXNDC5H3BN57 136 aa13.57□□□□□ -0.24
VCX3A-201ENST00000381089 KPNA4O00629 521 aaPredicted RBP13.57□□□□□ -0.24
VCX3A-201ENST00000381089 FAM107AO95990 144 aa13.57□□□□□ -0.24
VCX3A-201ENST00000381089 FSHBP01225 129 aa13.57□□□□□ -0.24
VCX3A-201ENST00000381089 IGHV1-46P01743 117 aa13.57□□□□□ -0.24
VCX3A-201ENST00000381089 NR2C1P13056 603 aa13.57□□□□□ -0.24
VCX3A-201ENST00000381089 MAKP20794 623 aa13.57□□□□□ -0.24
VCX3A-201ENST00000381089 STOMP27105 288 aa13.57□□□□□ -0.24
VCX3A-201ENST00000381089 DAP3P51398 398 aaKnown RBP13.57□□□□□ -0.24
VCX3A-201ENST00000381089 PABPC1L2AQ5JQF8 200 aa13.57□□□□□ -0.24
VCX3A-201ENST00000381089 METTL21CQ5VZV1 264 aa13.57□□□□□ -0.24
VCX3A-201ENST00000381089 ZNF771Q7L3S4 317 aaPredicted RBP13.57□□□□□ -0.24
VCX3A-201ENST00000381089 C10orf111Q8N326 155 aa13.57□□□□□ -0.24
VCX3A-201ENST00000381089 SIGLECL1Q8N7X8 197 aa13.57□□□□□ -0.24
VCX3A-201ENST00000381089 NOXO1Q8NFA2 376 aa13.57□□□□□ -0.24
VCX3A-201ENST00000381089 ADAMTS16Q8TE57 1224 aa13.57□□□□□ -0.24
VCX3A-201ENST00000381089 GTF3AQ92664 365 aaKnown RBP13.57□□□□□ -0.24
VCX3A-201ENST00000381089 WFDC6Q9BQY6 131 aa13.57□□□□□ -0.24
VCX3A-201ENST00000381089 SIAEQ9HAT2 523 aa13.57□□□□□ -0.24
VCX3A-201ENST00000381089 SAR1AQ9NR31 198 aa13.57□□□□□ -0.24
VCX3A-201ENST00000381089 ARMCX1Q9P291 453 aa13.57□□□□□ -0.24
VCX3A-201ENST00000381089 OPN4Q9UHM6 478 aa13.57□□□□□ -0.24
VCX3A-201ENST00000381089 ZDHHC8Q9ULC8 765 aa13.57□□□□□ -0.24
VCX3A-201ENST00000381089 ASAH2BP0C7U1 165 aa13.56□□□□□ -0.24
VCX3A-201ENST00000381089 PRTN3P24158 256 aa13.56□□□□□ -0.24
VCX3A-201ENST00000381089 GDI2P50395 445 aaKnown RBP13.56□□□□□ -0.24
VCX3A-201ENST00000381089 HIST3H3Q16695 136 aa13.56□□□□□ -0.24
VCX3A-201ENST00000381089 CYP51A1Q16850 503 aa13.56□□□□□ -0.24
VCX3A-201ENST00000381089 PAGE3Q5JUK9 113 aa13.56□□□□□ -0.24
VCX3A-201ENST00000381089 SPATA46Q5T0L3 261 aa13.56□□□□□ -0.24
VCX3A-201ENST00000381089 THEM4Q5T1C6 240 aa13.56□□□□□ -0.24
VCX3A-201ENST00000381089 MBNL2Q5VZF2 373 aaKnown RBP13.56□□□□□ -0.24
VCX3A-201ENST00000381089 DOK3Q7L591 496 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms