RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 ZNF239Q16600 458 aaKnown RBP20.73■□□□□ 0.91
VPS16-201ENST00000380443 PCK2Q16822 640 aa20.73■□□□□ 0.91
VPS16-201ENST00000380443 DEGS2Q6QHC5 323 aa20.73■□□□□ 0.91
VPS16-201ENST00000380443 STAC2Q6ZMT1 411 aa20.73■□□□□ 0.91
VPS16-201ENST00000380443 KRT77Q7Z794 578 aa20.73■□□□□ 0.91
VPS16-201ENST00000380443 C15orf40Q8WUR7 153 aa20.73■□□□□ 0.91
VPS16-201ENST00000380443 RAB40ALP0C0E4 278 aa20.72■□□□□ 0.91
VPS16-201ENST00000380443 DDOSTP39656 456 aa20.72■□□□□ 0.91
VPS16-201ENST00000380443 CLDN20P56880 219 aa20.72■□□□□ 0.91
VPS16-201ENST00000380443 MADCAM1Q13477 382 aa20.72■□□□□ 0.91
VPS16-201ENST00000380443 CARTPTQ16568 116 aa20.72■□□□□ 0.91
VPS16-201ENST00000380443 FAM199XQ6PEV8 388 aaPredicted RBP20.72■□□□□ 0.91
VPS16-201ENST00000380443 RAB40AQ8WXH6 277 aa20.72■□□□□ 0.91
VPS16-201ENST00000380443 ABHD1Q96SE0 405 aa20.72■□□□□ 0.91
VPS16-201ENST00000380443 NPAS1Q99742 590 aa20.72■□□□□ 0.91
VPS16-201ENST00000380443 ZPBPQ9BS86 351 aa20.72■□□□□ 0.91
VPS16-201ENST00000380443 MARVELD1Q9BSK0 173 aa20.72■□□□□ 0.91
VPS16-201ENST00000380443 PAIP2BQ9ULR5 123 aaKnown RBP20.72■□□□□ 0.91
VPS16-201ENST00000380443 COA3Q9Y2R0 106 aaPredicted RBP20.72■□□□□ 0.91
VPS16-201ENST00000380443 HDGFL3Q9Y3E1 203 aa20.72■□□□□ 0.91
VPS16-201ENST00000380443 CHCHD2Q9Y6H1 151 aaPredicted RBP20.72■□□□□ 0.91
VPS16-201ENST00000380443 ZFHX2Q9C0A1 2572 aaPredicted RBP20.72■□□□□ 0.91
VPS16-201ENST00000380443 CENPXA8MT69 81 aa20.71■□□□□ 0.91
VPS16-201ENST00000380443 TFECO14948 347 aaPredicted RBP20.71■□□□□ 0.91
VPS16-201ENST00000380443 SULT1B1O43704 296 aa20.71■□□□□ 0.91
VPS16-201ENST00000380443 HLA-DOBP13765 273 aa20.71■□□□□ 0.91
VPS16-201ENST00000380443 IL11P20809 199 aa20.71■□□□□ 0.91
VPS16-201ENST00000380443 CFPP27918 469 aa20.71■□□□□ 0.91
VPS16-201ENST00000380443 FOLR3P41439 243 aa20.71■□□□□ 0.91
VPS16-201ENST00000380443 RSBN1Q5VWQ0 802 aaPredicted RBP20.71■□□□□ 0.91
VPS16-201ENST00000380443 NDUFAF7Q7L592 441 aa20.71■□□□□ 0.91
VPS16-201ENST00000380443 SYT9Q86SS6 491 aa20.71■□□□□ 0.91
VPS16-201ENST00000380443 ARMC10Q8N2F6 343 aa20.71■□□□□ 0.91
VPS16-201ENST00000380443 PRSS35Q8N3Z0 413 aa20.71■□□□□ 0.91
VPS16-201ENST00000380443 SLC26A10Q8NG04 563 aa20.71■□□□□ 0.91
VPS16-201ENST00000380443 OR6F1Q8NGZ6 308 aa20.71■□□□□ 0.91
VPS16-201ENST00000380443 OR52N5Q8NH56 324 aa20.71■□□□□ 0.91
VPS16-201ENST00000380443 LGALS14Q8TCE9 139 aa20.71■□□□□ 0.91
VPS16-201ENST00000380443 CREB3L1Q96BA8 519 aa20.71■□□□□ 0.91
VPS16-201ENST00000380443 RBP7Q96R05 134 aa20.71■□□□□ 0.91
VPS16-201ENST00000380443 GFI1Q99684 422 aa20.71■□□□□ 0.91
VPS16-201ENST00000380443 ABCG5Q9H222 651 aa20.71■□□□□ 0.91
VPS16-201ENST00000380443 KLHL13Q9P2N7 655 aa20.71■□□□□ 0.91
VPS16-201ENST00000380443 ZNF221Q9UK13 617 aa20.71■□□□□ 0.91
VPS16-201ENST00000380443 TRABD2BA6NFA1 517 aa20.71■□□□□ 0.91
VPS16-201ENST00000380443 TTLL8A6PVC2 850 aa20.71■□□□□ 0.91
VPS16-201ENST00000380443 ORC5O43913 435 aa20.71■□□□□ 0.91
VPS16-201ENST00000380443 EFNA2O43921 213 aa20.71■□□□□ 0.91
VPS16-201ENST00000380443 GPANK1O95872 356 aa20.71■□□□□ 0.91
VPS16-201ENST00000380443 PSKH1P11801 424 aa20.71■□□□□ 0.91
VPS16-201ENST00000380443 GPR85P60893 370 aa20.71■□□□□ 0.91
VPS16-201ENST00000380443 POU3F1Q03052 451 aaPredicted RBP20.71■□□□□ 0.91
VPS16-201ENST00000380443 MYBPHQ13203 477 aa20.71■□□□□ 0.91
VPS16-201ENST00000380443 EIF2B1Q14232 305 aaKnown RBP20.71■□□□□ 0.91
VPS16-201ENST00000380443 ZNF433Q8N7K0 673 aaPredicted RBP20.71■□□□□ 0.91
VPS16-201ENST00000380443 MCHR2Q969V1 340 aa20.71■□□□□ 0.91
VPS16-201ENST00000380443 ABHD6Q9BV23 337 aa20.71■□□□□ 0.91
VPS16-201ENST00000380443 HS3ST3B1Q9Y662 390 aa20.71■□□□□ 0.91
VPS16-201ENST00000380443 DPP4P27487 766 aa20.7■□□□□ 0.9
VPS16-201ENST00000380443 BTG1P62324 171 aa20.7■□□□□ 0.9
VPS16-201ENST00000380443 WDR38Q5JTN6 314 aa20.7■□□□□ 0.9
VPS16-201ENST00000380443 DCAF12Q5T6F0 453 aa20.7■□□□□ 0.9
VPS16-201ENST00000380443 LRRTM1Q86UE6 522 aa20.7■□□□□ 0.9
VPS16-201ENST00000380443 PLCZ1Q86YW0 608 aa20.7■□□□□ 0.9
VPS16-201ENST00000380443 AMELYQ99218 206 aa20.7■□□□□ 0.9
VPS16-201ENST00000380443 ANGPTL4Q9BY76 406 aa20.7■□□□□ 0.9
VPS16-201ENST00000380443 SLC25A18Q9H1K4 315 aa20.7■□□□□ 0.9
VPS16-201ENST00000380443 LOC102725191A0A1B0GVB3 256 aa20.69■□□□□ 0.9
VPS16-201ENST00000380443 SLC6A1P30531 599 aa20.69■□□□□ 0.9
VPS16-201ENST00000380443 KIR3DL2P43630 455 aa20.69■□□□□ 0.9
VPS16-201ENST00000380443 SSR4P51571 173 aa20.69■□□□□ 0.9
VPS16-201ENST00000380443 MRPS10P82664 201 aaKnown RBP20.69■□□□□ 0.9
VPS16-201ENST00000380443 THEM4Q5T1C6 240 aa20.69■□□□□ 0.9
VPS16-201ENST00000380443 NHLRC1Q6VVB1 395 aa20.69■□□□□ 0.9
VPS16-201ENST00000380443 UEVLDQ8IX04 471 aa20.69■□□□□ 0.9
VPS16-201ENST00000380443 WDSUB1Q8N9V3 476 aa20.69■□□□□ 0.9
VPS16-201ENST00000380443 NTNG2Q96CW9 530 aa20.69■□□□□ 0.9
VPS16-201ENST00000380443 CACNG2Q9Y698 323 aa20.69■□□□□ 0.9
VPS16-201ENST00000380443 NSG1A0A0A6YYJ2 146 aa20.69■□□□□ 0.9
VPS16-201ENST00000380443 H3BML4 177 aa20.69■□□□□ 0.9
VPS16-201ENST00000380443 EEF1E1O43324 174 aaKnown RBP20.69■□□□□ 0.9
VPS16-201ENST00000380443 ICAM2P13598 275 aa20.69■□□□□ 0.9
VPS16-201ENST00000380443 MNDAP41218 407 aa20.69■□□□□ 0.9
VPS16-201ENST00000380443 RPS27P42677 84 aaKnown RBP20.69■□□□□ 0.9
VPS16-201ENST00000380443 GPR176Q14439 515 aa20.69■□□□□ 0.9
VPS16-201ENST00000380443 ETFDHQ16134 617 aa20.69■□□□□ 0.9
VPS16-201ENST00000380443 LRRC69Q6ZNQ3 347 aa20.69■□□□□ 0.9
VPS16-201ENST00000380443 KDM8Q8N371 416 aa20.69■□□□□ 0.9
VPS16-201ENST00000380443 S100A16Q96FQ6 103 aaKnown RBP20.69■□□□□ 0.9
VPS16-201ENST00000380443 PARD6AQ9NPB6 346 aa20.69■□□□□ 0.9
VPS16-201ENST00000380443 ANKRD10Q9NXR5 420 aa20.69■□□□□ 0.9
VPS16-201ENST00000380443 NLKQ9UBE8 527 aa20.69■□□□□ 0.9
VPS16-201ENST00000380443 RALGAPA1Q6GYQ0 2036 aa20.68■□□□□ 0.9
VPS16-201ENST00000380443 OTOGLQ3ZCN5 2332 aa20.68■□□□□ 0.9
VPS16-201ENST00000380443 GPR179Q6PRD1 2367 aa20.68■□□□□ 0.9
VPS16-201ENST00000380443 GDF9O60383 454 aa20.68■□□□□ 0.9
VPS16-201ENST00000380443 HES5Q5TA89 166 aa20.68■□□□□ 0.9
VPS16-201ENST00000380443 CATSPERDQ86XM0 798 aa20.68■□□□□ 0.9
VPS16-201ENST00000380443 CMTM4Q8IZR5 234 aa20.68■□□□□ 0.9
VPS16-201ENST00000380443 OR11G2Q8NGC1 345 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms