RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 CSF2RBP32927 897 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 RORCP51449 518 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 OR8G1Q15617 311 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 CLVS2Q5SYC1 327 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 BCL2L15Q5TBC7 163 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 PLAG1Q6DJT9 500 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 SLCO4C1Q6ZQN7 724 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 CBLL1Q75N03 491 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 BHLHA15Q7RTS1 189 aaPredicted RBP5.93□□□□□ -1.46
NEDD9-202ENST00000379446 OR2T4Q8NH00 348 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 C22orf15Q8WYQ4 148 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 MS4A6EQ96DS6 147 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 AKR1E2Q96JD6 320 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 JMJD8Q96S16 334 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 SYT3Q9BQG1 590 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 AIFM2Q9BRQ8 373 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 PCGF1Q9BSM1 259 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 SLC26A1Q9H2B4 701 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 CHRNA9Q9UGM1 479 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 FOXD3Q9UJU5 478 aaPredicted RBP5.93□□□□□ -1.46
NEDD9-202ENST00000379446 KCNMB2Q9Y691 235 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 BRCA1P38398 1863 aaKnown RBP5.93□□□□□ -1.46
NEDD9-202ENST00000379446 LOC105371267A0A1B0GV96 52 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 A0A1W2PQL4 384 aaPredicted RBP5.93□□□□□ -1.46
NEDD9-202ENST00000379446 LRIT2A6NDA9 550 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 PGRMC2O15173 223 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 VAMP5O95183 116 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 CNIH1O95406 144 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 MRPL3P09001 348 aaKnown RBP5.93□□□□□ -1.46
NEDD9-202ENST00000379446 RAB40ALP0C0E4 278 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 CRABP1P29762 137 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 SOX2P48431 317 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 KIAA0040Q15053 153 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 RNPS1Q15287 305 aaKnown RBP5.93□□□□□ -1.46
NEDD9-202ENST00000379446 BAK1Q16611 211 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 GPR157Q5UAW9 335 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 KDM4DQ6B0I6 523 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 KIRREL2Q6UWL6 708 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 MOB3CQ70IA8 216 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 SERPINA11Q86U17 422 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 OR51G2Q8NGK0 314 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 GGHQ92820 318 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 ZNF501Q96CX3 271 aaPredicted RBP5.93□□□□□ -1.46
NEDD9-202ENST00000379446 VWCEQ96DN2 955 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 PLPPR2Q96GM1 343 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 RASL10BQ96S79 203 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 NIPSNAP1Q9BPW8 284 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 C11orf54Q9H0W9 315 aaPredicted RBP5.93□□□□□ -1.46
NEDD9-202ENST00000379446 MS4A5Q9H3V2 200 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 GNG8Q9UK08 70 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 RNF115Q9Y4L5 304 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 DNAH12Q6ZR08 3092 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 MYO9AB2RTY4 2548 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 TRAPPC13A5PLN9 417 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 CYB5BO43169 146 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 GPR4P46093 362 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 MAP2K3P46734 347 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 HBA1P69905 142 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 GAB4Q2WGN9 574 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 SLX4IPQ5VYV7 408 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 IQCF1Q8N6M8 205 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 BHLHE41Q9C0J9 482 aaPredicted RBP5.93□□□□□ -1.46
NEDD9-202ENST00000379446 SAP130Q9H0E3 1048 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 TREM2Q9NZC2 230 aa5.93□□□□□ -1.46
NEDD9-202ENST00000379446 OTOFQ9HC10 1997 aa5.92□□□□□ -1.46
NEDD9-202ENST00000379446 PDCD11Q14690 1871 aaKnown RBP5.92□□□□□ -1.46
NEDD9-202ENST00000379446 C5orf49A4QMS7 147 aa5.92□□□□□ -1.46
NEDD9-202ENST00000379446 FZD6O60353 706 aa5.92□□□□□ -1.46
NEDD9-202ENST00000379446 ICOSLGO75144 302 aa5.92□□□□□ -1.46
NEDD9-202ENST00000379446 ZNF780AO75290 641 aaPredicted RBP5.92□□□□□ -1.46
NEDD9-202ENST00000379446 ETHE1O95571 254 aa5.92□□□□□ -1.46
NEDD9-202ENST00000379446 PF4V1P10720 104 aa5.92□□□□□ -1.46
NEDD9-202ENST00000379446 CTSSP25774 331 aa5.92□□□□□ -1.46
NEDD9-202ENST00000379446 P2RX1P51575 399 aa5.92□□□□□ -1.46
NEDD9-202ENST00000379446 GBX2P52951 348 aaPredicted RBP5.92□□□□□ -1.46
NEDD9-202ENST00000379446 TRA2BP62995 288 aaKnown RBP5.92□□□□□ -1.46
NEDD9-202ENST00000379446 PLA2G7Q13093 441 aa5.92□□□□□ -1.46
NEDD9-202ENST00000379446 SRSF6Q13247 344 aaKnown RBP5.92□□□□□ -1.46
NEDD9-202ENST00000379446 SQSTM1Q13501 440 aa5.92□□□□□ -1.46
NEDD9-202ENST00000379446 RSU1Q15404 277 aa5.92□□□□□ -1.46
NEDD9-202ENST00000379446 OCLNQ16625 522 aa5.92□□□□□ -1.46
NEDD9-202ENST00000379446 CHRFAM7AQ494W8 412 aa5.92□□□□□ -1.46
NEDD9-202ENST00000379446 B3GLCTQ6Y288 498 aa5.92□□□□□ -1.46
NEDD9-202ENST00000379446 ESPNLQ6ZVH7 1005 aa5.92□□□□□ -1.46
NEDD9-202ENST00000379446 LACC1Q8IV20 430 aa5.92□□□□□ -1.46
NEDD9-202ENST00000379446 Q8N402 240 aa5.92□□□□□ -1.46
NEDD9-202ENST00000379446 OR52E2Q8NGJ4 325 aa5.92□□□□□ -1.46
NEDD9-202ENST00000379446 PHB2Q99623 299 aa5.92□□□□□ -1.46
NEDD9-202ENST00000379446 PIP5K1AQ99755 562 aa5.92□□□□□ -1.46
NEDD9-202ENST00000379446 RSRP1Q9BUV0 290 aa5.92□□□□□ -1.46
NEDD9-202ENST00000379446 OR11A1Q9GZK7 315 aa5.92□□□□□ -1.46
NEDD9-202ENST00000379446 WDR54Q9H977 334 aa5.92□□□□□ -1.46
NEDD9-202ENST00000379446 MYEF2Q9P2K5 600 aaKnown RBP5.92□□□□□ -1.46
NEDD9-202ENST00000379446 CCL27Q9Y4X3 112 aa5.92□□□□□ -1.46
NEDD9-202ENST00000379446 SNRNP200O75643 2136 aaKnown RBP5.92□□□□□ -1.46
NEDD9-202ENST00000379446 PCM1Q15154 2024 aa5.92□□□□□ -1.46
NEDD9-202ENST00000379446 GAPDHSO14556 408 aaPredicted RBP5.92□□□□□ -1.46
NEDD9-202ENST00000379446 ZNHIT1O43257 154 aa5.92□□□□□ -1.46
NEDD9-202ENST00000379446 TLX2O43763 284 aaPredicted RBP5.92□□□□□ -1.46
NEDD9-202ENST00000379446 ACTL6AO96019 429 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms