RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 DMWDQ09019 674 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 FUT7Q11130 342 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 CHRFAM7AQ494W8 412 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 OR8D4Q8NGM9 314 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 DNASE2BQ8WZ79 361 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 GNRHR2Q96P88 292 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 TXNIPQ9H3M7 391 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 IGHV5-10-1A0A0J9YXX1 117 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 FAM230AA0A1W2PPH8 454 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 P2RY10O00398 339 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 RAD51DO75771 328 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 VAMP5O95183 116 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 AMY2AP04746 511 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 PCBD1P61457 104 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 TPBGQ13641 420 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 CD226Q15762 336 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 FOXRED2Q8IWF2 684 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 MENTQ9BUN1 341 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 ZNF768Q9H5H4 540 aaKnown RBP12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 SLC22A11Q9NSA0 550 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 UBQLN2Q9UHD9 624 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 TMEM184BQ9Y519 407 aaPredicted RBP12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 ZNF646O15015 1829 aaPredicted RBP12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 PRSS37A4D1T9 235 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 ANKRD61A6NGH8 418 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 CT45A8P0DMV1 189 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 CT45A9P0DMV2 189 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 HTR2AP28223 471 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 CEBPGP53567 150 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 SLC37A1P57057 533 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 CT45A2Q5DJT8 189 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 TMEM205Q6UW68 189 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 ZNF813Q6ZN06 617 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 SLC16A12Q6ZSM3 486 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 PRSS42Q7Z5A4 293 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 HCAR1Q9BXC0 346 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 ISG20L2Q9H9L3 353 aaKnown RBP12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 NDUFB11Q9NX14 153 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 DTX4Q9Y2E6 619 aa12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 SPTAN1Q13813 2472 aaKnown RBP12.87□□□□□ -0.35
SHROOM1-203ENST00000378679 CCDC163A0A0D9SF12 145 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 CENPVL1A0A0U1RR11 272 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 CXCL13O43927 109 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 GCM2O75603 506 aaPredicted RBP12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 HERV-K104P61576 105 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 LTBQ06643 244 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 MFAP5Q13361 173 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 NKPD1Q17RQ9 610 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 ZNF362Q5T0B9 420 aaPredicted RBP12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 ELP2Q6IA86 826 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 HEPHL1Q6MZM0 1159 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 UNQ6126/PRO20091Q6UXV3 157 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 SYT9Q86SS6 491 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 GLB1L2Q8IW92 636 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 POGLUT1Q8NBL1 392 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 SNIP1Q8TAD8 396 aaKnown RBP12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 LGALS14Q8TCE9 139 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 TMEM43Q9BTV4 400 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 ACTR6Q9GZN1 396 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 EMC7Q9NPA0 242 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 ASH2LQ9UBL3 628 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 B3GALT1Q9Y5Z6 326 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 RTTNQ86VV8 2226 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 FNDC1Q4ZHG4 1894 aaPredicted RBP12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 FABP7O15540 132 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 QDPRP09417 244 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 CPEP16870 476 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 APLNRP35414 380 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 NOVA1P51513 510 aaKnown RBP12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 RPS18P62269 152 aaKnown RBP12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 PTPMT1Q8WUK0 201 aaPredicted RBP12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 SLC7A6Q92536 515 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 ELMOD3Q96FG2 381 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 LRFN5Q96NI6 719 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 IP6K3Q96PC2 410 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 SLC6A15Q9H2J7 730 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 SH3BGRL2Q9UJC5 107 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 A3GALT2U3KPV4 340 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 TEX51A0A1B0GUA7 166 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 hCG_1807616A0A1W2PRN6 198 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 ARHGDIBP52566 201 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 FABP5Q01469 135 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 SF3A2Q15428 464 aaKnown RBP12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 YIF1BQ5BJH7 314 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 OGFOD3Q6PK18 319 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 DGAT2L6Q6ZPD8 337 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 RDH10Q8IZV5 341 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 PLPP5Q8NEB5 264 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 CPT1CQ8TCG5 803 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 STK35Q8TDR2 534 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 CREB3L1Q96BA8 519 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 YIPF6Q96EC8 236 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 HYLS1Q96M11 299 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 SNX18Q96RF0 628 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 MGAT4CQ9UBM8 478 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 C14orf166Q9Y224 244 aaKnown RBP12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 SLCO1B1Q9Y6L6 691 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 BDP1A6H8Y1 2624 aa12.86□□□□□ -0.35
SHROOM1-203ENST00000378679 THBS2P35442 1172 aa12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 SUMO3P55854 103 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms