RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 SUCLG1P53597 346 aaKnown RBP10.81□□□□□ -0.68
NPHP4-202ENST00000378161 FBXW4P57775 412 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 SUMO1P63165 101 aaKnown RBP10.81□□□□□ -0.68
NPHP4-202ENST00000378161 ZNF345Q14585 488 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 RAB30Q15771 203 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 VWA1Q6PCB0 445 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 NUP54Q7Z3B4 507 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 GRINAQ7Z429 371 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 ZNF584Q8IVC4 421 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 HAVCR2Q8TDQ0 301 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 OVCA2Q8WZ82 227 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 SNHG12Q9BXW3 62 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 PRDM13Q9H4Q3 707 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 ZCCHC3Q9NUD5 404 aaKnown RBP10.81□□□□□ -0.68
NPHP4-202ENST00000378161 ZNF586Q9NXT0 402 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 J3QR89 54 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 ZNF354AO60765 605 aaPredicted RBP10.81□□□□□ -0.68
NPHP4-202ENST00000378161 TRGC2P03986 189 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 ACRV1P26436 265 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 TACR3P29371 465 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 GPR3P46089 330 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 JOSD1Q15040 202 aaPredicted RBP10.81□□□□□ -0.68
NPHP4-202ENST00000378161 PRRT3Q5FWE3 981 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 MRM1Q6IN84 353 aaKnown RBP10.81□□□□□ -0.68
NPHP4-202ENST00000378161 SLC16A14Q7RTX9 510 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 PIANPQ8IYJ0 282 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 C2orf73Q8N5S3 287 aaPredicted RBP10.81□□□□□ -0.68
NPHP4-202ENST00000378161 KLHDC1Q8N7A1 406 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 OR13C9Q8NGT0 318 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 ASB17Q8WXJ9 295 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 KXD1Q9BQD3 176 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 SLC25A21Q9BQT8 299 aaPredicted RBP10.81□□□□□ -0.68
NPHP4-202ENST00000378161 FAAP24Q9BTP7 215 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 SLC25A19Q9HC21 320 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 A0A1W2PN81 502 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 ANKRD20A5PA0PJZ0 165 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 SERPINE3A8MV23 424 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 GFYI3L273 518 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 SAP18O00422 153 aaKnown RBP10.8□□□□□ -0.68
NPHP4-202ENST00000378161 SLC16A5O15375 505 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 ACTL6AO96019 429 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 ITPKBP27987 946 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 CHRNA7P36544 502 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 RPL34P49207 117 aaKnown RBP10.8□□□□□ -0.68
NPHP4-202ENST00000378161 OR12D2P58182 307 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 FOXK2Q01167 660 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 LASP1Q14847 261 aaKnown RBP10.8□□□□□ -0.68
NPHP4-202ENST00000378161 CHRFAM7AQ494W8 412 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 LRRC73Q5JTD7 316 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 RTL6Q6ICC9 239 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 TMPRSS12Q86WS5 348 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 CPXM2Q8N436 756 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 PGAM5Q96HS1 289 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 ARHGAP9Q9BRR9 750 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 IL21RQ9HBE5 538 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 SLC25A37Q9NYZ2 338 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 PPP1R3CQ9UQK1 317 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 TBC1D3BA6NDS4 549 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 NPIPA5E9PKD4 350 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 NPIPA3F8WFD2 350 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 P2RX6O15547 441 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 EFSO43281 561 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 PRNPP04156 253 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 CTSSP25774 331 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 DCTDP32321 178 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 TLE3Q04726 772 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 REEP3Q6NUK4 255 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 ZNF66Q6ZN08 573 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 LRP11Q86VZ4 500 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 ZNF709Q8N972 641 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 UBL7Q96S82 380 aaPredicted RBP10.8□□□□□ -0.68
NPHP4-202ENST00000378161 OR8D2Q9GZM6 311 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 POFUT1Q9H488 388 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 IL17CQ9P0M4 197 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 NPIPA1Q9UND3 350 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 ZFP30Q9Y2G7 519 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 CDKN1CP49918 316 aaPredicted RBP10.8□□□□□ -0.68
NPHP4-202ENST00000378161 CBFBQ13951 182 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 XKR7Q5GH72 579 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 ZNF573Q86YE8 665 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 PGBD5Q8N414 524 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 OR4K1Q8NGD4 311 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 OR13D1Q8NGV5 346 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 SLC22A12Q96S37 553 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 SELENOIQ9C0D9 397 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 NEUROD4Q9HD90 331 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 P2RX2Q9UBL9 471 aa10.8□□□□□ -0.68
NPHP4-202ENST00000378161 MEIS3P1A6NDR6 274 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 TAAR5O14804 337 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 TRAF3IP2O43734 574 aaPredicted RBP10.79□□□□□ -0.68
NPHP4-202ENST00000378161 KCNK5O95279 499 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 KLK1P06870 262 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 MPC1LP0DKB6 136 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 IDSP22304 550 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 NOVA1P51513 510 aaKnown RBP10.79□□□□□ -0.68
NPHP4-202ENST00000378161 SYT14P1Q58G82 188 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.79□□□□□ -0.68
NPHP4-202ENST00000378161 ABHD4Q8TB40 342 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 CDS1Q92903 461 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 RASD2Q96D21 266 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms