RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 VANGL1Q8TAA9 524 aaPredicted RBP8.13□□□□□ -1.11
C9orf85-202ENST00000377027 ADAMTS16Q8TE57 1224 aa8.13□□□□□ -1.11
C9orf85-202ENST00000377027 SEPHS2Q99611 448 aa8.13□□□□□ -1.11
C9orf85-202ENST00000377027 EPYCQ99645 322 aa8.13□□□□□ -1.11
C9orf85-202ENST00000377027 SPATA5L1Q9BVQ7 753 aa8.13□□□□□ -1.11
C9orf85-202ENST00000377027 PCDHAC1Q9H158 963 aa8.13□□□□□ -1.11
C9orf85-202ENST00000377027 CACYBPQ9HB71 228 aaKnown RBP8.13□□□□□ -1.11
C9orf85-202ENST00000377027 TMEM27Q9HBJ8 222 aa8.13□□□□□ -1.11
C9orf85-202ENST00000377027 LPAR2Q9HBW0 351 aa8.13□□□□□ -1.11
C9orf85-202ENST00000377027 TMEM38BQ9NVV0 291 aa8.13□□□□□ -1.11
C9orf85-202ENST00000377027 TREM2Q9NZC2 230 aa8.13□□□□□ -1.11
C9orf85-202ENST00000377027 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.13□□□□□ -1.11
C9orf85-202ENST00000377027 FBXO9Q9UK97 447 aaPredicted RBP8.13□□□□□ -1.11
C9orf85-202ENST00000377027 POFUT2Q9Y2G5 429 aa8.13□□□□□ -1.11
C9orf85-202ENST00000377027 CACNG2Q9Y698 323 aa8.13□□□□□ -1.11
C9orf85-202ENST00000377027 WNK2Q9Y3S1 2297 aa8.12□□□□□ -1.11
C9orf85-202ENST00000377027 PRORSD1PA6NEY8 169 aa8.12□□□□□ -1.11
C9orf85-202ENST00000377027 M0QX08 132 aa8.12□□□□□ -1.11
C9orf85-202ENST00000377027 KPNA4O00629 521 aaPredicted RBP8.12□□□□□ -1.11
C9orf85-202ENST00000377027 TCF21O43680 179 aa8.12□□□□□ -1.11
C9orf85-202ENST00000377027 UBL3O95164 117 aa8.12□□□□□ -1.11
C9orf85-202ENST00000377027 RAB36O95755 333 aa8.12□□□□□ -1.11
C9orf85-202ENST00000377027 CH25HO95992 272 aa8.12□□□□□ -1.11
C9orf85-202ENST00000377027 MT-ATP6P00846 226 aa8.12□□□□□ -1.11
C9orf85-202ENST00000377027 SERPINA5P05154 406 aa8.12□□□□□ -1.11
C9orf85-202ENST00000377027 C8BP07358 591 aa8.12□□□□□ -1.11
C9orf85-202ENST00000377027 TSPAN19P0C672 248 aa8.12□□□□□ -1.11
C9orf85-202ENST00000377027 GAAP10253 952 aa8.12□□□□□ -1.11
C9orf85-202ENST00000377027 TNFRSF1BP20333 461 aa8.12□□□□□ -1.11
C9orf85-202ENST00000377027 PPIBP23284 216 aaKnown RBP8.12□□□□□ -1.11
C9orf85-202ENST00000377027 UGT2B15P54855 530 aa8.12□□□□□ -1.11
C9orf85-202ENST00000377027 MYBPC1Q00872 1141 aa8.12□□□□□ -1.11
C9orf85-202ENST00000377027 MVKQ03426 396 aa8.12□□□□□ -1.11
C9orf85-202ENST00000377027 TRMT5Q32P41 509 aaKnown RBP8.12□□□□□ -1.11
C9orf85-202ENST00000377027 SPRNQ5BIV9 151 aa8.12□□□□□ -1.11
C9orf85-202ENST00000377027 AGBL2Q5U5Z8 902 aa8.12□□□□□ -1.11
C9orf85-202ENST00000377027 PIWIL3Q7Z3Z3 882 aaKnown RBP8.12□□□□□ -1.11
C9orf85-202ENST00000377027 DHDDSQ86SQ9 333 aa8.12□□□□□ -1.11
C9orf85-202ENST00000377027 RANBP3LQ86VV4 465 aaPredicted RBP8.12□□□□□ -1.11
C9orf85-202ENST00000377027 NKAIN4Q8IVV8 208 aa8.12□□□□□ -1.11
C9orf85-202ENST00000377027 DPP10Q8N608 796 aa8.12□□□□□ -1.11
C9orf85-202ENST00000377027 PFN4Q8NHR9 129 aa8.12□□□□□ -1.11
C9orf85-202ENST00000377027 NABP1Q96AH0 204 aa8.12□□□□□ -1.11
C9orf85-202ENST00000377027 NMD3Q96D46 503 aaKnown RBP8.12□□□□□ -1.11
C9orf85-202ENST00000377027 THOC1Q96FV9 657 aaKnown RBP8.12□□□□□ -1.11
C9orf85-202ENST00000377027 ZNF347Q96SE7 839 aa8.12□□□□□ -1.11
C9orf85-202ENST00000377027 ZNF607Q96SK3 696 aa8.12□□□□□ -1.11
C9orf85-202ENST00000377027 CGREF1Q99674 301 aa8.12□□□□□ -1.11
C9orf85-202ENST00000377027 MRPL13Q9BYD1 178 aaKnown RBP8.12□□□□□ -1.11
C9orf85-202ENST00000377027 OR51B6Q9H340 312 aa8.12□□□□□ -1.11
C9orf85-202ENST00000377027 KAT8Q9H7Z6 458 aaKnown RBP8.12□□□□□ -1.11
C9orf85-202ENST00000377027 G6PC2Q9NQR9 355 aa8.12□□□□□ -1.11
C9orf85-202ENST00000377027 C20orf141Q9NUB4 165 aa8.12□□□□□ -1.11
C9orf85-202ENST00000377027 HIF1ANQ9NWT6 349 aa8.12□□□□□ -1.11
C9orf85-202ENST00000377027 SLC7A8Q9UHI5 535 aa8.12□□□□□ -1.11
C9orf85-202ENST00000377027 SLC7A7Q9UM01 511 aa8.12□□□□□ -1.11
C9orf85-202ENST00000377027 SPEF1Q9Y4P9 236 aa8.12□□□□□ -1.11
C9orf85-202ENST00000377027 ZNF726A6NNF4 738 aa8.11□□□□□ -1.11
C9orf85-202ENST00000377027 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.11□□□□□ -1.11
C9orf85-202ENST00000377027 B4DSR2 109 aa8.11□□□□□ -1.11
C9orf85-202ENST00000377027 FXYD1O00168 92 aa8.11□□□□□ -1.11
C9orf85-202ENST00000377027 FBP2O00757 339 aa8.11□□□□□ -1.11
C9orf85-202ENST00000377027 DHHO43323 396 aa8.11□□□□□ -1.11
C9orf85-202ENST00000377027 MGRN1O60291 552 aa8.11□□□□□ -1.11
C9orf85-202ENST00000377027 MSMBP08118 114 aa8.11□□□□□ -1.11
C9orf85-202ENST00000377027 QDPRP09417 244 aa8.11□□□□□ -1.11
C9orf85-202ENST00000377027 SAGP10523 405 aaPredicted RBP8.11□□□□□ -1.11
C9orf85-202ENST00000377027 ZNF250P15622 560 aa8.11□□□□□ -1.11
C9orf85-202ENST00000377027 FUT1P19526 365 aa8.11□□□□□ -1.11
C9orf85-202ENST00000377027 PCGF2P35227 344 aa8.11□□□□□ -1.11
C9orf85-202ENST00000377027 GPR6P46095 362 aaPredicted RBP8.11□□□□□ -1.11
C9orf85-202ENST00000377027 ZNF133P52736 654 aaPredicted RBP8.11□□□□□ -1.11
C9orf85-202ENST00000377027 ERVFRD-1P60508 538 aa8.11□□□□□ -1.11
C9orf85-202ENST00000377027 AVPI1Q5T686 147 aa8.11□□□□□ -1.11
C9orf85-202ENST00000377027 ZNF101Q8IZC7 436 aa8.11□□□□□ -1.11
C9orf85-202ENST00000377027 C10orf53Q8N6V4 93 aa8.11□□□□□ -1.11
C9orf85-202ENST00000377027 C11orf65Q8NCR3 313 aa8.11□□□□□ -1.11
C9orf85-202ENST00000377027 CPEB3Q8NE35 698 aaKnown RBP8.11□□□□□ -1.11
C9orf85-202ENST00000377027 SLC30A7Q8NEW0 376 aa8.11□□□□□ -1.11
C9orf85-202ENST00000377027 OR4K5Q8NGD3 323 aa8.11□□□□□ -1.11
C9orf85-202ENST00000377027 LRRC8CQ8TDW0 803 aa8.11□□□□□ -1.11
C9orf85-202ENST00000377027 RDH5Q92781 318 aa8.11□□□□□ -1.11
C9orf85-202ENST00000377027 MCHR2Q969V1 340 aa8.11□□□□□ -1.11
C9orf85-202ENST00000377027 TMEM186Q96B77 213 aa8.11□□□□□ -1.11
C9orf85-202ENST00000377027 SLC25A44Q96H78 314 aaPredicted RBP8.11□□□□□ -1.11
C9orf85-202ENST00000377027 MS4A5Q9H3V2 200 aa8.11□□□□□ -1.11
C9orf85-202ENST00000377027 DENND2DQ9H6A0 471 aaPredicted RBP8.11□□□□□ -1.11
C9orf85-202ENST00000377027 B3GAT2Q9NPZ5 323 aa8.11□□□□□ -1.11
C9orf85-202ENST00000377027 ANGPT4Q9Y264 503 aa8.11□□□□□ -1.11
C9orf85-202ENST00000377027 UGT2A1Q9Y4X1 527 aa8.11□□□□□ -1.11
C9orf85-202ENST00000377027 PRKDCP78527 4128 aaKnown RBP8.1□□□□□ -1.11
C9orf85-202ENST00000377027 TRAPPC13A5PLN9 417 aa8.1□□□□□ -1.11
C9orf85-202ENST00000377027 C17orf100A8MU93 164 aa8.1□□□□□ -1.11
C9orf85-202ENST00000377027 EVPLLA8MZ36 301 aa8.1□□□□□ -1.11
C9orf85-202ENST00000377027 RNF13O43567 381 aa8.1□□□□□ -1.11
C9orf85-202ENST00000377027 PIP5K1CO60331 668 aa8.1□□□□□ -1.11
C9orf85-202ENST00000377027 SHOX2O60902 331 aaPredicted RBP8.1□□□□□ -1.11
C9orf85-202ENST00000377027 SERPINB7O75635 380 aa8.1□□□□□ -1.11
C9orf85-202ENST00000377027 SLC2A10O95528 541 aa8.1□□□□□ -1.11
C9orf85-202ENST00000377027 SNAP29O95721 258 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms