RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 THEM6Q8WUY1 208 aa8.62□□□□□ -1.03
TRIM39-202ENST00000376659 RAB40AQ8WXH6 277 aa8.62□□□□□ -1.03
TRIM39-202ENST00000376659 MRGPRFQ96AM1 343 aa8.62□□□□□ -1.03
TRIM39-202ENST00000376659 ZDHHC12Q96GR4 267 aa8.62□□□□□ -1.03
TRIM39-202ENST00000376659 KCNK15Q9H427 330 aa8.62□□□□□ -1.03
TRIM39-202ENST00000376659 LMAN1LQ9HAT1 526 aa8.62□□□□□ -1.03
TRIM39-202ENST00000376659 ZC4H2Q9NQZ6 224 aa8.62□□□□□ -1.03
TRIM39-202ENST00000376659 ING3Q9NXR8 418 aa8.62□□□□□ -1.03
TRIM39-202ENST00000376659 B3GAT1Q9P2W7 334 aa8.62□□□□□ -1.03
TRIM39-202ENST00000376659 NOSIPQ9Y314 301 aaKnown RBP8.62□□□□□ -1.03
TRIM39-202ENST00000376659 U3KQ87 197 aa8.62□□□□□ -1.03
TRIM39-202ENST00000376659 MYO9BQ13459 2157 aa8.61□□□□□ -1.03
TRIM39-202ENST00000376659 A0A1B0GX78 115 aa8.61□□□□□ -1.03
TRIM39-202ENST00000376659 PDCD5O14737 125 aa8.61□□□□□ -1.03
TRIM39-202ENST00000376659 XRCC3O43542 346 aa8.61□□□□□ -1.03
TRIM39-202ENST00000376659 CPNE3O75131 537 aaKnown RBP8.61□□□□□ -1.03
TRIM39-202ENST00000376659 ISG15P05161 165 aa8.61□□□□□ -1.03
TRIM39-202ENST00000376659 VSIG10L2P0DP72 767 aa8.61□□□□□ -1.03
TRIM39-202ENST00000376659 STOMP27105 288 aa8.61□□□□□ -1.03
TRIM39-202ENST00000376659 POLR2HP52434 150 aaKnown RBP8.61□□□□□ -1.03
TRIM39-202ENST00000376659 QRFPP83859 136 aa8.61□□□□□ -1.03
TRIM39-202ENST00000376659 ETFDHQ16134 617 aa8.61□□□□□ -1.03
TRIM39-202ENST00000376659 ACKR1Q16570 336 aa8.61□□□□□ -1.03
TRIM39-202ENST00000376659 BICRALQ6AI39 1079 aa8.61□□□□□ -1.03
TRIM39-202ENST00000376659 LINGO2Q7L985 606 aa8.61□□□□□ -1.03
TRIM39-202ENST00000376659 JAZF1Q86VZ6 243 aa8.61□□□□□ -1.03
TRIM39-202ENST00000376659 KMT5CQ86Y97 462 aa8.61□□□□□ -1.03
TRIM39-202ENST00000376659 GRPEL2Q8TAA5 225 aa8.61□□□□□ -1.03
TRIM39-202ENST00000376659 CLDN23Q96B33 292 aa8.61□□□□□ -1.03
TRIM39-202ENST00000376659 KLHL15Q96M94 604 aa8.61□□□□□ -1.03
TRIM39-202ENST00000376659 INTS14Q96SY0 518 aa8.61□□□□□ -1.03
TRIM39-202ENST00000376659 CDCP1Q9H5V8 836 aa8.61□□□□□ -1.03
TRIM39-202ENST00000376659 PRMT8Q9NR22 394 aaPredicted RBP8.61□□□□□ -1.03
TRIM39-202ENST00000376659 STEAP1Q9UHE8 339 aa8.61□□□□□ -1.03
TRIM39-202ENST00000376659 ARID1BQ8NFD5 2236 aaPredicted RBP8.61□□□□□ -1.03
TRIM39-202ENST00000376659 A0A1W2PNV4 684 aa8.61□□□□□ -1.03
TRIM39-202ENST00000376659 CDC14CA4D256 554 aa8.61□□□□□ -1.03
TRIM39-202ENST00000376659 VSTM2BA6NLU5 285 aa8.61□□□□□ -1.03
TRIM39-202ENST00000376659 OR2B3O76000 313 aa8.61□□□□□ -1.03
TRIM39-202ENST00000376659 NDUFB6O95139 128 aa8.61□□□□□ -1.03
TRIM39-202ENST00000376659 ALDOBP05062 364 aa8.61□□□□□ -1.03
TRIM39-202ENST00000376659 SNRPD2P62316 118 aaKnown RBP8.61□□□□□ -1.03
TRIM39-202ENST00000376659 LINC00303Q3SY05 128 aa8.61□□□□□ -1.03
TRIM39-202ENST00000376659 ZNF626Q68DY1 528 aa8.61□□□□□ -1.03
TRIM39-202ENST00000376659 DPY19L4Q7Z388 723 aa8.61□□□□□ -1.03
TRIM39-202ENST00000376659 SLC26A10Q8NG04 563 aa8.61□□□□□ -1.03
TRIM39-202ENST00000376659 ZC3H10Q96K80 434 aaKnown RBP8.61□□□□□ -1.03
TRIM39-202ENST00000376659 CACNG6Q9BXT2 260 aa8.61□□□□□ -1.03
TRIM39-202ENST00000376659 TMEM272A0A1B0GTI8 110 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 A0A1W2PPC1 479 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 A0A1W2PQ72 361 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 ARHGEF9O43307 516 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 SUSD5O60279 629 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 DCTDP32321 178 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 HTR2BP41595 481 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 CBFBQ13951 182 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 IDO2Q6ZQW0 420 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 OR4D10Q8NGI6 311 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 OR10S1Q8NGN2 331 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 POC1BQ8TC44 478 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 ASB5Q8WWX0 329 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 PPP1R14AQ96A00 147 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 MARVELD3Q96A59 401 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 GRHPRQ9UBQ7 328 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 TMED7-TICAM2A0A0A6YYA0 188 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 SDC3O75056 442 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 H2AFB2P0C5Z0 115 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 TDGF1P13385 188 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 GLB1P16278 677 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 ZNF239Q16600 458 aaKnown RBP8.6□□□□□ -1.03
TRIM39-202ENST00000376659 C2orf68Q2NKX9 166 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 OTPQ5XKR4 325 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 ZNF767PQ75MW2 155 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 MDGA2Q7Z553 956 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 ANKRD37Q7Z713 158 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 SSC4DQ8WTU2 575 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 SNAPC3Q92966 411 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 ULBP3Q9BZM4 244 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 ZNF436Q9C0F3 470 aaPredicted RBP8.6□□□□□ -1.03
TRIM39-202ENST00000376659 SLC17A5Q9NRA2 495 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 KLHL9Q9P2J3 617 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 CLEC4AQ9UMR7 237 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 TMED7Q9Y3B3 224 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 KMT2EQ8IZD2 1858 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 PLSCR5A0PG75 271 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 NAP1L6A6NFF2 107 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 ANKUB1A6NFN9 424 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 H7C417 338 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 PHYHO14832 338 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 IFNA16P05015 189 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 ZNF735P0CB33 412 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 FBLP22087 321 aaKnown RBP8.6□□□□□ -1.03
TRIM39-202ENST00000376659 RAD52P43351 418 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 MRPS10P82664 201 aaKnown RBP8.6□□□□□ -1.03
TRIM39-202ENST00000376659 RASGEF1BQ0VAM2 473 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 C1orf140Q5VVS0 124 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 FAAP20Q6NZ36 180 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 ZNF679Q8IYX0 411 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 UXS1Q8NBZ7 420 aa8.6□□□□□ -1.03
TRIM39-202ENST00000376659 GPR148Q8TDV2 347 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms