RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 TRABD2BA6NFA1 517 aa11.22□□□□□ -0.61
CLCN6-206ENST00000376496 TBX1O43435 398 aa11.22□□□□□ -0.61
CLCN6-206ENST00000376496 CXCL13O43927 109 aa11.22□□□□□ -0.61
CLCN6-206ENST00000376496 PNPP00491 289 aa11.22□□□□□ -0.61
CLCN6-206ENST00000376496 ITGB2P05107 769 aa11.22□□□□□ -0.61
CLCN6-206ENST00000376496 PGA4P0DJD7 388 aa11.22□□□□□ -0.61
CLCN6-206ENST00000376496 PGA3P0DJD8 388 aa11.22□□□□□ -0.61
CLCN6-206ENST00000376496 SLC2A2P11168 524 aaPredicted RBP11.22□□□□□ -0.61
CLCN6-206ENST00000376496 CRABP1P29762 137 aa11.22□□□□□ -0.61
CLCN6-206ENST00000376496 CASRP41180 1078 aa11.22□□□□□ -0.61
CLCN6-206ENST00000376496 MAGEA5P43359 124 aa11.22□□□□□ -0.61
CLCN6-206ENST00000376496 RAC1P63000 192 aa11.22□□□□□ -0.61
CLCN6-206ENST00000376496 PHYHD1Q5SRE7 291 aa11.22□□□□□ -0.61
CLCN6-206ENST00000376496 RPL22L1Q6P5R6 122 aaKnown RBP11.22□□□□□ -0.61
CLCN6-206ENST00000376496 GGNQ86UU5 652 aa11.22□□□□□ -0.61
CLCN6-206ENST00000376496 S100ZQ8WXG8 99 aa11.22□□□□□ -0.61
CLCN6-206ENST00000376496 CEP19Q96LK0 163 aa11.22□□□□□ -0.61
CLCN6-206ENST00000376496 FER1L6-AS2Q96M78 137 aa11.22□□□□□ -0.61
CLCN6-206ENST00000376496 MRPL13Q9BYD1 178 aaKnown RBP11.22□□□□□ -0.61
CLCN6-206ENST00000376496 WDR12Q9GZL7 423 aaKnown RBP11.22□□□□□ -0.61
CLCN6-206ENST00000376496 SLC25A18Q9H1K4 315 aa11.22□□□□□ -0.61
CLCN6-206ENST00000376496 MALT1Q9UDY8 824 aa11.22□□□□□ -0.61
CLCN6-206ENST00000376496 SLC22A13Q9Y226 551 aa11.22□□□□□ -0.61
CLCN6-206ENST00000376496 A0A0B4J203 849 aa11.21□□□□□ -0.61
CLCN6-206ENST00000376496 CCL11P51671 97 aa11.21□□□□□ -0.61
CLCN6-206ENST00000376496 H3F3AP84243 136 aa11.21□□□□□ -0.61
CLCN6-206ENST00000376496 DCXRQ7Z4W1 244 aa11.21□□□□□ -0.61
CLCN6-206ENST00000376496 OR51A4Q8NGJ6 313 aa11.21□□□□□ -0.61
CLCN6-206ENST00000376496 C11orf40Q8WZ69 217 aa11.21□□□□□ -0.61
CLCN6-206ENST00000376496 MAP6Q96JE9 813 aa11.21□□□□□ -0.61
CLCN6-206ENST00000376496 SLC6A15Q9H2J7 730 aa11.21□□□□□ -0.61
CLCN6-206ENST00000376496 TRAPPC4Q9Y296 219 aa11.21□□□□□ -0.61
CLCN6-206ENST00000376496 PEX16Q9Y5Y5 336 aa11.21□□□□□ -0.61
CLCN6-206ENST00000376496 BOD1L1Q8NFC6 3051 aa11.21□□□□□ -0.61
CLCN6-206ENST00000376496 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.21□□□□□ -0.62
CLCN6-206ENST00000376496 PMS2P2O95744 297 aa11.21□□□□□ -0.62
CLCN6-206ENST00000376496 SPINK2P20155 84 aa11.21□□□□□ -0.62
CLCN6-206ENST00000376496 HSF2Q03933 536 aa11.21□□□□□ -0.62
CLCN6-206ENST00000376496 MFGE8Q08431 387 aaPredicted RBP11.21□□□□□ -0.62
CLCN6-206ENST00000376496 SLC25A35Q3KQZ1 300 aa11.21□□□□□ -0.62
CLCN6-206ENST00000376496 IDNKQ5T6J7 187 aa11.21□□□□□ -0.62
CLCN6-206ENST00000376496 PRSS35Q8N3Z0 413 aa11.21□□□□□ -0.62
CLCN6-206ENST00000376496 NOXO1Q8NFA2 376 aa11.21□□□□□ -0.62
CLCN6-206ENST00000376496 SLC25A44Q96H78 314 aaPredicted RBP11.21□□□□□ -0.62
CLCN6-206ENST00000376496 BRD7Q9NPI1 651 aa11.21□□□□□ -0.62
CLCN6-206ENST00000376496 MGAQ8IWI9 3026 aa11.21□□□□□ -0.62
CLCN6-206ENST00000376496 A0A1B0GVC2 190 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 A6NIN4 97 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 SMAD9O15198 467 aaKnown RBP11.2□□□□□ -0.62
CLCN6-206ENST00000376496 PIN1P1O15428 100 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 KHDRBS3O75525 346 aaKnown RBP11.2□□□□□ -0.62
CLCN6-206ENST00000376496 SC5DO75845 299 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 QDPRP09417 244 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 GAAP10253 952 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 ZNF823P16415 610 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 CSRP1P21291 193 aaKnown RBP11.2□□□□□ -0.62
CLCN6-206ENST00000376496 CD40LGP29965 261 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 PTGS2P35354 604 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 C3AR1Q16581 482 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 HBMQ6B0K9 141 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 LRFN4Q6PJG9 635 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 RBP7Q96R05 134 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 FAM173AQ9BQD7 235 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 MED18Q9BUE0 208 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 KCNN2Q9H2S1 579 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 CENPMQ9NSP4 180 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 C14orf119Q9NWQ9 140 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 ABI3Q9P2A4 366 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 POLHQ9Y253 713 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 A0A075B6Q4 140 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 ZNF726A6NNF4 738 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 HPGDSO60760 199 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 IGHG1P01857 330 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 LIPCP11150 499 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 CEACAM1P13688 526 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 ZNF17P17021 662 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 POU3F2P20265 443 aaPredicted RBP11.2□□□□□ -0.62
CLCN6-206ENST00000376496 NTF4P34130 210 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 KIR3DL2P43630 455 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 SELENOPP49908 381 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 SLC18B1Q6NT16 456 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 KRT77Q7Z794 578 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 CCDC190Q86UF4 302 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 MCHR2Q969V1 340 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 OR8B4Q96RC9 309 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 SNX18Q96RF0 628 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 ATF6BQ99941 703 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 TTTY12Q9BZ98 90 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.2□□□□□ -0.62
CLCN6-206ENST00000376496 NOX4Q9NPH5 578 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 FANCFQ9NPI8 374 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 BOKQ9UMX3 212 aaPredicted RBP11.2□□□□□ -0.62
CLCN6-206ENST00000376496 AK6Q9Y3D8 172 aaKnown RBP11.2□□□□□ -0.62
CLCN6-206ENST00000376496 A3GALT2U3KPV4 340 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 KIAA1549Q9HCM3 1950 aa11.2□□□□□ -0.62
CLCN6-206ENST00000376496 PAHP00439 452 aa11.19□□□□□ -0.62
CLCN6-206ENST00000376496 TACSTD2P09758 323 aa11.19□□□□□ -0.62
CLCN6-206ENST00000376496 PSMD7P51665 324 aa11.19□□□□□ -0.62
CLCN6-206ENST00000376496 CARD18P57730 90 aa11.19□□□□□ -0.62
CLCN6-206ENST00000376496 PLGLB1Q02325 96 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms