RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 AMELYQ99218 206 aa13.06□□□□□ -0.32
TNFRSF1B-201ENST00000376259 PPA2Q9H2U2 334 aa13.06□□□□□ -0.32
TNFRSF1B-201ENST00000376259 PRR13Q9NZ81 148 aa13.06□□□□□ -0.32
TNFRSF1B-201ENST00000376259 FRRS1LQ9P0K9 344 aa13.06□□□□□ -0.32
TNFRSF1B-201ENST00000376259 SHPKQ9UHJ6 478 aa13.06□□□□□ -0.32
TNFRSF1B-201ENST00000376259 HELZP42694 1942 aaKnown RBP13.06□□□□□ -0.32
TNFRSF1B-201ENST00000376259 PLRG1O43660 514 aaKnown RBP13.06□□□□□ -0.32
TNFRSF1B-201ENST00000376259 SGCAQ16586 387 aa13.06□□□□□ -0.32
TNFRSF1B-201ENST00000376259 AWAT2Q6E213 333 aa13.06□□□□□ -0.32
TNFRSF1B-201ENST00000376259 FGGYQ96C11 551 aa13.06□□□□□ -0.32
TNFRSF1B-201ENST00000376259 C7orf50Q9BRJ6 194 aaKnown RBP13.06□□□□□ -0.32
TNFRSF1B-201ENST00000376259 MRM2Q9UI43 246 aaKnown RBP13.06□□□□□ -0.32
TNFRSF1B-201ENST00000376259 PLCL2Q9UPR0 1127 aa13.06□□□□□ -0.32
TNFRSF1B-201ENST00000376259 HEATR5AQ86XA9 2040 aa13.06□□□□□ -0.32
TNFRSF1B-201ENST00000376259 NAP1L6A6NFF2 107 aa13.06□□□□□ -0.32
TNFRSF1B-201ENST00000376259 METTL12A8MUP2 240 aa13.06□□□□□ -0.32
TNFRSF1B-201ENST00000376259 HTRA4P83105 476 aaPredicted RBP13.06□□□□□ -0.32
TNFRSF1B-201ENST00000376259 TUSC1Q2TAM9 212 aa13.06□□□□□ -0.32
TNFRSF1B-201ENST00000376259 ZNF658BQ4V348 819 aaPredicted RBP13.06□□□□□ -0.32
TNFRSF1B-201ENST00000376259 TMEM92Q6UXU6 159 aa13.06□□□□□ -0.32
TNFRSF1B-201ENST00000376259 OR2AK2Q8NG84 335 aa13.06□□□□□ -0.32
TNFRSF1B-201ENST00000376259 OR14A16Q8NHC5 309 aa13.06□□□□□ -0.32
TNFRSF1B-201ENST00000376259 BANF2Q9H503 90 aa13.06□□□□□ -0.32
TNFRSF1B-201ENST00000376259 CD207Q9UJ71 328 aa13.06□□□□□ -0.32
TNFRSF1B-201ENST00000376259 FOXJ3Q9UPW0 622 aa13.06□□□□□ -0.32
TNFRSF1B-201ENST00000376259 OR5K3A6NET4 321 aa13.05□□□□□ -0.32
TNFRSF1B-201ENST00000376259 BTCP35070 178 aa13.05□□□□□ -0.32
TNFRSF1B-201ENST00000376259 ACAA2P42765 397 aaKnown RBP13.05□□□□□ -0.32
TNFRSF1B-201ENST00000376259 MC2RQ01718 297 aa13.05□□□□□ -0.32
TNFRSF1B-201ENST00000376259 BAMBIQ13145 260 aa13.05□□□□□ -0.32
TNFRSF1B-201ENST00000376259 WDR38Q5JTN6 314 aa13.05□□□□□ -0.32
TNFRSF1B-201ENST00000376259 FAM69BQ5VUD6 431 aa13.05□□□□□ -0.32
TNFRSF1B-201ENST00000376259 DCAF12L2Q5VW00 463 aa13.05□□□□□ -0.32
TNFRSF1B-201ENST00000376259 TMEM225Q6GV28 225 aa13.05□□□□□ -0.32
TNFRSF1B-201ENST00000376259 OR51A2Q8NGJ7 313 aa13.05□□□□□ -0.32
TNFRSF1B-201ENST00000376259 DCUN1D4Q92564 292 aa13.05□□□□□ -0.32
TNFRSF1B-201ENST00000376259 ANKRD9Q96BM1 317 aaPredicted RBP13.05□□□□□ -0.32
TNFRSF1B-201ENST00000376259 ZNF587Q96SQ5 575 aaPredicted RBP13.05□□□□□ -0.32
TNFRSF1B-201ENST00000376259 ZNF230Q9UIE0 474 aaPredicted RBP13.05□□□□□ -0.32
TNFRSF1B-201ENST00000376259 A0A087WUJ7 227 aa13.05□□□□□ -0.32
TNFRSF1B-201ENST00000376259 HLA-DQB1P01920 261 aa13.05□□□□□ -0.32
TNFRSF1B-201ENST00000376259 HOXB5P09067 269 aa13.05□□□□□ -0.32
TNFRSF1B-201ENST00000376259 CXCL2P19875 107 aa13.05□□□□□ -0.32
TNFRSF1B-201ENST00000376259 HTR2CP28335 458 aa13.05□□□□□ -0.32
TNFRSF1B-201ENST00000376259 CD1CP29017 333 aa13.05□□□□□ -0.32
TNFRSF1B-201ENST00000376259 LIMK1P53667 647 aa13.05□□□□□ -0.32
TNFRSF1B-201ENST00000376259 PRSS12P56730 875 aa13.05□□□□□ -0.32
TNFRSF1B-201ENST00000376259 TLE3Q04726 772 aa13.05□□□□□ -0.32
TNFRSF1B-201ENST00000376259 AIMP2Q13155 320 aaKnown RBP13.05□□□□□ -0.32
TNFRSF1B-201ENST00000376259 KLF9Q13886 244 aaPredicted RBP13.05□□□□□ -0.32
TNFRSF1B-201ENST00000376259 HAGHLQ6PII5 290 aaPredicted RBP13.05□□□□□ -0.32
TNFRSF1B-201ENST00000376259 SLC16A9Q7RTY1 509 aa13.05□□□□□ -0.32
TNFRSF1B-201ENST00000376259 SYS1Q8N2H4 156 aa13.05□□□□□ -0.32
TNFRSF1B-201ENST00000376259 WNT2BQ93097 391 aa13.05□□□□□ -0.32
TNFRSF1B-201ENST00000376259 LYRM4Q9HD34 91 aa13.05□□□□□ -0.32
TNFRSF1B-201ENST00000376259 STEAP1Q9UHE8 339 aa13.05□□□□□ -0.32
TNFRSF1B-201ENST00000376259 A0A0G2JK05 382 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 CYR61O00622 381 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 SYT7O43581 403 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 KCNJ13O60928 360 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 PMP2P02689 132 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 LPLP06858 475 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 CSF1P09603 554 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 SULT1A3P0DMM9 295 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 SULT1A4P0DMN0 295 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 PNMTP11086 282 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 CAPZA1P52907 286 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 SNU13P55769 128 aaKnown RBP13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 DYRK1AQ13627 763 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 ZNF169Q14929 603 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 DCXRQ7Z4W1 244 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 ZNF283Q8N7M2 679 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 OR2AJ1Q8NGZ0 328 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 SLC41A2Q96JW4 573 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 TRAV1-2A0A0B4J238 106 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 G3V3Y1 287 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 K7EQS6 105 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 SUSD5O60279 629 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 FBXO24O75426 580 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 NKX2-2O95096 273 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 CALCBP10092 127 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 EFNB1P98172 346 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 GAB4Q2WGN9 574 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 NPSR1Q6W5P4 371 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 TAAR8Q969N4 342 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 SLC25A38Q96DW6 304 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 WDR77Q9BQA1 342 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 HRH4Q9H3N8 390 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 FNDC1Q4ZHG4 1894 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 GGT3PA6NGU5 568 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 PGCP20142 388 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 ACTBP60709 375 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 ZP1P60852 638 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 ACTG1P63261 375 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 GLO1Q04760 184 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 SEZ6L2Q6UXD5 910 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 TRILQ7L0X0 811 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 ABHD12BQ7Z5M8 362 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 TRAPPC6BQ86SZ2 158 aa13.04□□□□□ -0.32
TNFRSF1B-201ENST00000376259 GVQW1Q8N7I0 195 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms