RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 RFPL4AL1F8VTS6 287 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 ZNF254O75437 659 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 OR4E1P0C645 316 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 CT45A8P0DMV1 189 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 CT45A9P0DMV2 189 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 LIPCP11150 499 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 ZP2Q05996 745 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 ZNF74Q16587 644 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 LRRC37A5PQ49AS3 106 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 CT45A2Q5DJT8 189 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 GABRG1Q8N1C3 465 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 SDR16C5Q8N3Y7 309 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 LRRC75AQ8NAA5 344 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 PLPP7Q8NBV4 271 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 BAHD1Q8TBE0 780 aaPredicted RBP12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 TSEN15Q8WW01 171 aaKnown RBP12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 RELTQ969Z4 430 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 FAM3DQ96BQ1 224 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 RBM18Q96H35 190 aaKnown RBP12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 NPAS1Q99742 590 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 PTDSS2Q9BVG9 487 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 TPSD1Q9BZJ3 242 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 TINAGL1Q9GZM7 467 aaPredicted RBP12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 COMMD4Q9H0A8 199 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 GTF2A1LQ9UNN4 478 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 SLC22A13Q9Y226 551 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 SLC6A5Q9Y345 797 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 PRAMEF2O60811 474 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 WNT11O96014 354 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 ALOX5APP20292 161 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 SLC25A1P53007 311 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 ISXQ2M1V0 245 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 MESTQ5EB52 335 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 WDR38Q5JTN6 314 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 CBLN3Q6UW01 205 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 SLC35D2Q76EJ3 337 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 C12orf45Q8N5I9 185 aaPredicted RBP12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 BCORP1Q8N888 145 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 BPIFCQ8NFQ6 507 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 MCHR2Q969V1 340 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 ZNF75AQ96N20 296 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 GPX7Q96SL4 187 aaPredicted RBP12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 ZNF416Q9BWM5 594 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 FAM60AQ9NP50 221 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 HRASLS2Q9NWW9 162 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 TAS2R3Q9NYW6 316 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 GRHPRQ9UBQ7 328 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 KCNG2Q9UJ96 466 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 CYP8B1Q9UNU6 501 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 SDHAP31040 664 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 RAB38P57729 211 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 BTG2P78543 158 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 ZNF169Q14929 603 aaPredicted RBP12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 ATXN7L3Q14CW9 347 aaPredicted RBP12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 NR0B2Q15466 257 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 MPPED2Q15777 294 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 ASPHD2Q6ICH7 369 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 BEST3Q8N1M1 668 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 GALNT16Q8N428 558 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 STEAP2Q8NFT2 490 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 NARS2Q96I59 477 aaKnown RBP12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 SEC22AQ96IW7 307 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 LPAR4Q99677 370 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 CCDC3Q9BQI4 270 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 PELOQ9BRX2 385 aaKnown RBP12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 SYT4Q9H2B2 425 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 Q9N2J8 555 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 PCDHB16Q9NRJ7 776 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 HIF3AQ9Y2N7 669 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 SLCO1B1Q9Y6L6 691 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 A0A0A6YYC8 382 aaPredicted RBP12.75□□□□□ -0.37
CLCNKA-202ENST00000375692 A6NCN8 305 aa12.75□□□□□ -0.37
CLCNKA-202ENST00000375692 I3L1I5 382 aaPredicted RBP12.75□□□□□ -0.37
CLCNKA-202ENST00000375692 CCSO14618 274 aa12.75□□□□□ -0.37
CLCNKA-202ENST00000375692 EIF4E2O60573 245 aaKnown RBP12.75□□□□□ -0.37
CLCNKA-202ENST00000375692 ALOX12BO75342 701 aa12.75□□□□□ -0.37
CLCNKA-202ENST00000375692 ITGB2P05107 769 aa12.75□□□□□ -0.37
CLCNKA-202ENST00000375692 LUMP51884 338 aaPredicted RBP12.75□□□□□ -0.37
CLCNKA-202ENST00000375692 RPL18Q07020 188 aaKnown RBP12.75□□□□□ -0.37
CLCNKA-202ENST00000375692 EIF2B5Q13144 721 aaKnown RBP12.75□□□□□ -0.37
CLCNKA-202ENST00000375692 CD226Q15762 336 aa12.75□□□□□ -0.37
CLCNKA-202ENST00000375692 NDUFAF7Q7L592 441 aa12.75□□□□□ -0.37
CLCNKA-202ENST00000375692 ZNF627Q7L945 461 aa12.75□□□□□ -0.37
CLCNKA-202ENST00000375692 DEFB119Q8N690 84 aa12.75□□□□□ -0.37
CLCNKA-202ENST00000375692 OR1J2Q8NGS2 313 aa12.75□□□□□ -0.37
CLCNKA-202ENST00000375692 MAFAQ8NHW3 353 aaPredicted RBP12.75□□□□□ -0.37
CLCNKA-202ENST00000375692 KTI12Q96EK9 354 aaPredicted RBP12.75□□□□□ -0.37
CLCNKA-202ENST00000375692 TSPAN32Q96QS1 320 aa12.75□□□□□ -0.37
CLCNKA-202ENST00000375692 MNTQ99583 582 aa12.75□□□□□ -0.37
CLCNKA-202ENST00000375692 SLC25A32Q9H2D1 315 aa12.75□□□□□ -0.37
CLCNKA-202ENST00000375692 FBRSQ9HAH7 460 aa12.75□□□□□ -0.37
CLCNKA-202ENST00000375692 RASL12Q9NYN1 266 aa12.75□□□□□ -0.37
CLCNKA-202ENST00000375692 TMEM82A0PJX8 343 aa12.75□□□□□ -0.37
CLCNKA-202ENST00000375692 TMEM212A6NML5 194 aa12.75□□□□□ -0.37
CLCNKA-202ENST00000375692 DOK2O60496 412 aa12.75□□□□□ -0.37
CLCNKA-202ENST00000375692 RAB3DO95716 219 aa12.75□□□□□ -0.37
CLCNKA-202ENST00000375692 CSN2P05814 226 aa12.75□□□□□ -0.37
CLCNKA-202ENST00000375692 EGR4Q05215 589 aa12.75□□□□□ -0.37
CLCNKA-202ENST00000375692 TAF13Q15543 124 aa12.75□□□□□ -0.37
CLCNKA-202ENST00000375692 RAB11BQ15907 218 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms