RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 RAB40AQ8WXH6 277 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 ROBO4Q8WZ75 1007 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 FOXRED1Q96CU9 486 aaPredicted RBP16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 OPALINQ96PE5 141 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 TMEM59Q9BXS4 323 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 KCNIP1Q9NZI2 227 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 FBXL4Q9UKA2 621 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 SIGLEC7Q9Y286 467 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 LCTP09848 1927 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 TEX46H3BTG2 121 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 HRGP04196 525 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 ZNF806P0C7X5 589 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 FABP5Q01469 135 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 TRAPPC6BQ86SZ2 158 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 OR4D11Q8NGI4 311 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 TTC9Q92623 222 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 ANKRD9Q96BM1 317 aaPredicted RBP16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 KCTD12Q96CX2 325 aaKnown RBP16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 LRRC46Q96FV0 321 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 SLC19A3Q9BZV2 496 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 SLC25A19Q9HC21 320 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 ACKR4Q9NPB9 350 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 A0A0B4J2E0 115 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 A0A1B0GX12 115 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 PRSS37A4D1T9 235 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 AKAIN1P0CW23 69 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 ZNF93P35789 620 aaPredicted RBP16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 GDNFP39905 211 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 PSG6Q00889 435 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 SLC10A1Q14973 349 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 SF3B4Q15427 424 aaKnown RBP eCLIP16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 YIF1BQ5BJH7 314 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 EIF5AL1Q6IS14 154 aaKnown RBP16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 TMEM81Q6P7N7 255 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 OR4M1Q8NGD0 313 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 APH1AQ96BI3 265 aa16.31■□□□□ 0.2
PTPDC1-202ENST00000375360 AKAP6Q13023 2319 aa16.3■□□□□ 0.2
PTPDC1-202ENST00000375360 EXOSC6Q5RKV6 272 aaKnown RBP16.3■□□□□ 0.2
PTPDC1-202ENST00000375360 NPSR1Q6W5P4 371 aa16.3■□□□□ 0.2
PTPDC1-202ENST00000375360 NOX3Q9HBY0 568 aa16.3■□□□□ 0.2
PTPDC1-202ENST00000375360 ALG5Q9Y673 324 aa16.3■□□□□ 0.2
PTPDC1-202ENST00000375360 CCDC187A0A096LP49 1063 aa16.3■□□□□ 0.2
PTPDC1-202ENST00000375360 CDC42EP2O14613 210 aa16.3■□□□□ 0.2
PTPDC1-202ENST00000375360 CLDN15P56746 228 aa16.3■□□□□ 0.2
PTPDC1-202ENST00000375360 IL11RAQ14626 422 aa16.3■□□□□ 0.2
PTPDC1-202ENST00000375360 LYPD4Q6UWN0 246 aa16.3■□□□□ 0.2
PTPDC1-202ENST00000375360 THSD4Q6ZMP0 1018 aa16.3■□□□□ 0.2
PTPDC1-202ENST00000375360 BPIFB2Q8N4F0 458 aa16.3■□□□□ 0.2
PTPDC1-202ENST00000375360 ASCC1Q8N9N2 400 aaKnown RBP16.3■□□□□ 0.2
PTPDC1-202ENST00000375360 PPIL3Q9H2H8 161 aaKnown RBP16.3■□□□□ 0.2
PTPDC1-202ENST00000375360 B3GALT5Q9Y2C3 310 aa16.3■□□□□ 0.2
PTPDC1-202ENST00000375360 A0A1B0GTQ1 180 aa16.3■□□□□ 0.2
PTPDC1-202ENST00000375360 CSF1P09603 554 aa16.3■□□□□ 0.2
PTPDC1-202ENST00000375360 BLVRBP30043 206 aaPredicted RBP16.3■□□□□ 0.2
PTPDC1-202ENST00000375360 AQP6Q13520 282 aa16.3■□□□□ 0.2
PTPDC1-202ENST00000375360 WIPI1Q5MNZ9 446 aaPredicted RBP16.3■□□□□ 0.2
PTPDC1-202ENST00000375360 AGAP7PQ5VUJ5 663 aa16.3■□□□□ 0.2
PTPDC1-202ENST00000375360 OR6V1Q8N148 313 aa16.3■□□□□ 0.2
PTPDC1-202ENST00000375360 ZADH2Q8N4Q0 377 aa16.3■□□□□ 0.2
PTPDC1-202ENST00000375360 ZNF321PQ8N8H1 164 aa16.3■□□□□ 0.2
PTPDC1-202ENST00000375360 OR5L1Q8NGL2 311 aa16.3■□□□□ 0.2
PTPDC1-202ENST00000375360 AGAP4Q96P64 663 aa16.3■□□□□ 0.2
PTPDC1-202ENST00000375360 TAAR9Q96RI9 348 aa16.3■□□□□ 0.2
PTPDC1-202ENST00000375360 OR51J1Q9H342 316 aa16.3■□□□□ 0.2
PTPDC1-202ENST00000375360 TXNIPQ9H3M7 391 aa16.3■□□□□ 0.2
PTPDC1-202ENST00000375360 DNAJB12Q9NXW2 375 aaKnown RBP16.3■□□□□ 0.2
PTPDC1-202ENST00000375360 MRPS28Q9Y2Q9 187 aaKnown RBP16.3■□□□□ 0.2
PTPDC1-202ENST00000375360 FITM1A5D6W6 292 aa16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 ARRDC5A6NEK1 342 aa16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 LTBRP36941 435 aa16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 RHBDD2Q6NTF9 364 aa16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 DTWD2Q8NBA8 298 aa16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 OR4D9Q8NGE8 314 aa16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 SLAMF6Q96DU3 332 aa16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 MYOTQ9UBF9 498 aa16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 ZFC3H1O60293 1989 aaKnown RBP16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 A0A0B4J203 849 aa16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 SLC33A1O00400 549 aaPredicted RBP16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 CYR61O00622 381 aa16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 GOSR2O14653 212 aa16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 ARPC5O15511 151 aa16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 SGCEO43556 437 aa16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 RFPL3O75679 317 aa16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 VAMP5O95183 116 aa16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 DEFA5Q01523 94 aa16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 FAPQ12884 760 aa16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 USP51Q70EK9 711 aa16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 ANGPTL5Q86XS5 388 aa16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 OR51E1Q8TCB6 317 aa16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 FAM3DQ96BQ1 224 aa16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 RANBP3Q9H6Z4 567 aaPredicted RBP16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 MGAT4AQ9UM21 535 aa16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 TNFSF11O14788 317 aa16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 TBXA2RP21731 343 aa16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 PPIAP62937 165 aaKnown RBP16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 VASH2Q86V25 355 aa16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 SLC43A2Q8N370 569 aa16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 MRGPRX4Q96LA9 322 aa16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 C12orf4Q9NQ89 552 aa16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 ZNF223Q9UK11 482 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms