RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 DPY19L4Q7Z388 723 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 CADM4Q8NFZ8 388 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 CCL4L1Q8NHW4 92 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 SLC22A18Q96BI1 424 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 SEC22AQ96IW7 307 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 OR2M4Q96R27 311 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 POLE3Q9NRF9 147 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 GPR27Q9NS67 375 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 COMMD9Q9P000 198 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 A0A087WUJ7 227 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 PRSS38A1L453 326 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 POM121BA6NF01 834 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 OR5H14A6NHG9 310 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 OR4C45A6NMZ5 311 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 DISC1C4P0D8 188 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 H7C2Y5 167 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 CDC40O60508 579 aaKnown RBP eCLIP10.04□□□□□ -0.8
CCDC40-203ENST00000374877 AMY2AP04746 511 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 ITGA5P08648 1049 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 CNR1P21554 472 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 CSF2RBP32927 897 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 ZXDAP98168 799 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 LY6G6FQ5SQ64 297 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 BIVMQ86UB2 503 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 GABRG1Q8N1C3 465 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 TSNAXQ99598 290 aaKnown RBP10.04□□□□□ -0.8
CCDC40-203ENST00000374877 PTDSS2Q9BVG9 487 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 LYRM4Q9HD34 91 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 UPB1Q9UBR1 384 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 MLXQ9UH92 298 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 PILRAQ9UKJ1 303 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 FARSAQ9Y285 508 aaKnown RBP10.04□□□□□ -0.8
CCDC40-203ENST00000374877 NOP16Q9Y3C1 178 aaKnown RBP10.04□□□□□ -0.8
CCDC40-203ENST00000374877 SIT1Q9Y3P8 196 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 OR10H1Q9Y4A9 318 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 UNC80Q8N2C7 3258 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 CACNA1IQ9P0X4 2223 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 A0A0D9SG52 128 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 CYR61O00622 381 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 PMS2P2O95744 297 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 GPANK1O95872 356 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 PRPS1P60891 318 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 C2orf76Q3KRA6 126 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 SCGB2B2Q4G0G5 96 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 LRRC69Q6ZNQ3 347 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 CLEC1AQ8NC01 280 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 OR1J2Q8NGS2 313 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 PMM1Q92871 262 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 FAM3DQ96BQ1 224 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 DNAJA3Q96EY1 480 aa10.04□□□□□ -0.8
CCDC40-203ENST00000374877 VRK1Q99986 396 aaPredicted RBP10.04□□□□□ -0.8
CCDC40-203ENST00000374877 KNL1Q8NG31 2342 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 EML5Q05BV3 1969 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 A0A1W2PPC4 97 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 FAM25EA8MYX2 175 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 GPR31O00270 319 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 ZNF254O75437 659 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 HOXA6P31267 233 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 ACTR1BP42025 376 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 ACTR1AP61163 376 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 FGL1Q08830 312 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 RAB11BQ15907 218 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 TMEM31Q5JXX7 168 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 FCRL6Q6DN72 434 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 LIN54Q6MZP7 749 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 PLPP7Q8NBV4 271 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 MNTQ99583 582 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 ZFYVE21Q9BQ24 234 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 POTEKPQ9BYX7 375 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 SLC7A5P2Q9GIP4 190 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 TINAGL1Q9GZM7 467 aaPredicted RBP10.03□□□□□ -0.8
CCDC40-203ENST00000374877 WDR76Q9H967 626 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 ZMAT3Q9HA38 289 aaKnown RBP10.03□□□□□ -0.8
CCDC40-203ENST00000374877 LRIT1Q9P2V4 623 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 GPN3Q9UHW5 284 aaPredicted RBP10.03□□□□□ -0.8
CCDC40-203ENST00000374877 DTX4Q9Y2E6 619 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 LOC100509620A0A075B734 347 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 MPTX1A8MV57 137 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 HRKO00198 91 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 SIGLEC6O43699 453 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 SRPX2O60687 465 aaPredicted RBP10.03□□□□□ -0.8
CCDC40-203ENST00000374877 ABHD16AO95870 558 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 WNT11O96014 354 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 ALG10Q5BKT4 473 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 PABPC1L2AQ5JQF8 200 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 NDUFAF7Q7L592 441 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 OR2W3Q7Z3T1 314 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 OR5T2Q8NGG2 359 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 SPACA7Q96KW9 195 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 DNTTIP1Q9H147 329 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 MYEF2Q9P2K5 600 aaKnown RBP10.03□□□□□ -0.8
CCDC40-203ENST00000374877 PURGQ9UJV8 347 aaKnown RBP10.03□□□□□ -0.8
CCDC40-203ENST00000374877 ABCD4O14678 606 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 AKR7A3O95154 331 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 CD14P08571 375 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 CD34P28906 385 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 CXCL12P48061 93 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 ACTBP60709 375 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 ACTG1P63261 375 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 UBE2IP63279 158 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms