RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 BANF2Q9H503 90 aa16.03■□□□□ 0.16
TRAF3IP1-201ENST00000373327 RHBDD3Q9Y3P4 386 aa16.03■□□□□ 0.16
TRAF3IP1-201ENST00000373327 POLEQ07864 2286 aa16.03■□□□□ 0.16
TRAF3IP1-201ENST00000373327 TEX13DA0A0J9YY54 714 aaPredicted RBP16.03■□□□□ 0.16
TRAF3IP1-201ENST00000373327 TMEM212A6NML5 194 aa16.03■□□□□ 0.16
TRAF3IP1-201ENST00000373327 TMIGD3P0DMS9 266 aaPredicted RBP16.03■□□□□ 0.16
TRAF3IP1-201ENST00000373327 PRSS12P56730 875 aa16.03■□□□□ 0.16
TRAF3IP1-201ENST00000373327 PUDPQ08623 228 aa16.03■□□□□ 0.16
TRAF3IP1-201ENST00000373327 LINC00303Q3SY05 128 aa16.03■□□□□ 0.16
TRAF3IP1-201ENST00000373327 SLC6A15Q9H2J7 730 aa16.03■□□□□ 0.16
TRAF3IP1-201ENST00000373327 SF3B6Q9Y3B4 125 aaKnown RBP16.03■□□□□ 0.16
TRAF3IP1-201ENST00000373327 BPTFQ12830 3046 aa16.03■□□□□ 0.16
TRAF3IP1-201ENST00000373327 A0A1B0GX78 115 aa16.02■□□□□ 0.16
TRAF3IP1-201ENST00000373327 SLC33A1O00400 549 aaPredicted RBP16.02■□□□□ 0.16
TRAF3IP1-201ENST00000373327 AKAIN1P0CW23 69 aa16.02■□□□□ 0.16
TRAF3IP1-201ENST00000373327 CD34P28906 385 aa16.02■□□□□ 0.16
TRAF3IP1-201ENST00000373327 RPL27P61353 136 aaKnown RBP16.02■□□□□ 0.16
TRAF3IP1-201ENST00000373327 ZNF615Q8N8J6 731 aa16.02■□□□□ 0.16
TRAF3IP1-201ENST00000373327 OR5L2Q8NGL0 311 aa16.02■□□□□ 0.16
TRAF3IP1-201ENST00000373327 C19orf25Q9UFG5 118 aaPredicted RBP16.02■□□□□ 0.16
TRAF3IP1-201ENST00000373327 A8MVM7 634 aa16.02■□□□□ 0.16
TRAF3IP1-201ENST00000373327 F5H5P2 479 aa16.02■□□□□ 0.16
TRAF3IP1-201ENST00000373327 AIPO00170 330 aa16.02■□□□□ 0.16
TRAF3IP1-201ENST00000373327 ABCD3P28288 659 aa16.02■□□□□ 0.16
TRAF3IP1-201ENST00000373327 LYPD8Q6UX82 237 aa16.02■□□□□ 0.16
TRAF3IP1-201ENST00000373327 ZFAND1Q8TCF1 268 aa16.02■□□□□ 0.16
TRAF3IP1-201ENST00000373327 MOKQ9UQ07 419 aa16.02■□□□□ 0.16
TRAF3IP1-201ENST00000373327 OR14I1A6ND48 311 aa16.02■□□□□ 0.15
TRAF3IP1-201ENST00000373327 H0YIG0 161 aa16.02■□□□□ 0.15
TRAF3IP1-201ENST00000373327 TNFRSF10AO00220 468 aa16.02■□□□□ 0.15
TRAF3IP1-201ENST00000373327 CCINQ13939 588 aa16.02■□□□□ 0.15
TRAF3IP1-201ENST00000373327 B3GNTL1Q67FW5 361 aaPredicted RBP16.02■□□□□ 0.15
TRAF3IP1-201ENST00000373327 RAB12Q6IQ22 244 aa16.02■□□□□ 0.15
TRAF3IP1-201ENST00000373327 FAM198BQ6UWH4 519 aa16.02■□□□□ 0.15
TRAF3IP1-201ENST00000373327 OR14A16Q8NHC5 309 aa16.02■□□□□ 0.15
TRAF3IP1-201ENST00000373327 OR51B6Q9H340 312 aa16.02■□□□□ 0.15
TRAF3IP1-201ENST00000373327 B9D1Q9UPM9 204 aa16.02■□□□□ 0.15
TRAF3IP1-201ENST00000373327 HLA-AP01891 365 aaKnown RBP16.02■□□□□ 0.15
TRAF3IP1-201ENST00000373327 CD3DP04234 171 aa16.02■□□□□ 0.15
TRAF3IP1-201ENST00000373327 RAB40ALP0C0E4 278 aa16.02■□□□□ 0.15
TRAF3IP1-201ENST00000373327 GLI4P10075 376 aa16.02■□□□□ 0.15
TRAF3IP1-201ENST00000373327 AMY2BP19961 511 aa16.02■□□□□ 0.15
TRAF3IP1-201ENST00000373327 ST3GAL2Q16842 350 aa16.02■□□□□ 0.15
TRAF3IP1-201ENST00000373327 RHOUQ7L0Q8 258 aa16.02■□□□□ 0.15
TRAF3IP1-201ENST00000373327 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.02■□□□□ 0.15
TRAF3IP1-201ENST00000373327 PPP1R3BQ86XI6 285 aa16.02■□□□□ 0.15
TRAF3IP1-201ENST00000373327 RAB40AQ8WXH6 277 aa16.02■□□□□ 0.15
TRAF3IP1-201ENST00000373327 PPP1R3EQ9H7J1 279 aa16.02■□□□□ 0.15
TRAF3IP1-201ENST00000373327 PLEK2Q9NYT0 353 aa16.02■□□□□ 0.15
TRAF3IP1-201ENST00000373327 A0A087WV48 116 aa16.01■□□□□ 0.15
TRAF3IP1-201ENST00000373327 ENDOUP21128 410 aaKnown RBP16.01■□□□□ 0.15
TRAF3IP1-201ENST00000373327 CDAP32320 146 aa16.01■□□□□ 0.15
TRAF3IP1-201ENST00000373327 ACTBP60709 375 aa16.01■□□□□ 0.15
TRAF3IP1-201ENST00000373327 ACTG1P63261 375 aa16.01■□□□□ 0.15
TRAF3IP1-201ENST00000373327 NPEPL1Q8NDH3 523 aa16.01■□□□□ 0.15
TRAF3IP1-201ENST00000373327 ZNF764Q96H86 408 aaPredicted RBP16.01■□□□□ 0.15
TRAF3IP1-201ENST00000373327 ACKR4Q9NPB9 350 aa16.01■□□□□ 0.15
TRAF3IP1-201ENST00000373327 HELZP42694 1942 aaKnown RBP16.01■□□□□ 0.15
TRAF3IP1-201ENST00000373327 IGHV3-15A0A0B4J1V0 119 aa16.01■□□□□ 0.15
TRAF3IP1-201ENST00000373327 TP53I11O14683 189 aa16.01■□□□□ 0.15
TRAF3IP1-201ENST00000373327 RGS11O94810 467 aa16.01■□□□□ 0.15
TRAF3IP1-201ENST00000373327 IGHV3-9P01782 118 aa16.01■□□□□ 0.15
TRAF3IP1-201ENST00000373327 TMEM225BP0DP42 221 aa16.01■□□□□ 0.15
TRAF3IP1-201ENST00000373327 NANOS3P60323 173 aaKnown RBP16.01■□□□□ 0.15
TRAF3IP1-201ENST00000373327 SLC36A2Q495M3 483 aa16.01■□□□□ 0.15
TRAF3IP1-201ENST00000373327 SYS1Q8N2H4 156 aa16.01■□□□□ 0.15
TRAF3IP1-201ENST00000373327 OR5T2Q8NGG2 359 aa16.01■□□□□ 0.15
TRAF3IP1-201ENST00000373327 VN1R1Q9GZP7 353 aa16.01■□□□□ 0.15
TRAF3IP1-201ENST00000373327 TAS2R3Q9NYW6 316 aa16.01■□□□□ 0.15
TRAF3IP1-201ENST00000373327 DOCK7Q96N67 2140 aa16.01■□□□□ 0.15
TRAF3IP1-201ENST00000373327 SC5DO75845 299 aa16.01■□□□□ 0.15
TRAF3IP1-201ENST00000373327 PI3P19957 117 aa16.01■□□□□ 0.15
TRAF3IP1-201ENST00000373327 ACY1Q03154 408 aa16.01■□□□□ 0.15
TRAF3IP1-201ENST00000373327 OPCMLQ14982 345 aa16.01■□□□□ 0.15
TRAF3IP1-201ENST00000373327 C2orf76Q3KRA6 126 aa16.01■□□□□ 0.15
TRAF3IP1-201ENST00000373327 LCN10Q6JVE6 187 aa16.01■□□□□ 0.15
TRAF3IP1-201ENST00000373327 TOMM40LQ969M1 308 aa16.01■□□□□ 0.15
TRAF3IP1-201ENST00000373327 LOC107986453A0A1B0GWG9 222 aa16■□□□□ 0.15
TRAF3IP1-201ENST00000373327 PHYHO14832 338 aa16■□□□□ 0.15
TRAF3IP1-201ENST00000373327 GPR85P60893 370 aa16■□□□□ 0.15
TRAF3IP1-201ENST00000373327 UBE2IP63279 158 aaKnown RBP16■□□□□ 0.15
TRAF3IP1-201ENST00000373327 IFITM2Q01629 132 aa16■□□□□ 0.15
TRAF3IP1-201ENST00000373327 TNK1Q13470 666 aa16■□□□□ 0.15
TRAF3IP1-201ENST00000373327 STEAP1BQ6NZ63 245 aa16■□□□□ 0.15
TRAF3IP1-201ENST00000373327 C3P1Q6ZMU1 363 aa16■□□□□ 0.15
TRAF3IP1-201ENST00000373327 TSPAN32Q96QS1 320 aa16■□□□□ 0.15
TRAF3IP1-201ENST00000373327 ZNF436Q9C0F3 470 aaPredicted RBP16■□□□□ 0.15
TRAF3IP1-201ENST00000373327 KLHDC2Q9Y2U9 406 aa16■□□□□ 0.15
TRAF3IP1-201ENST00000373327 SERPINA2P20848 420 aa16■□□□□ 0.15
TRAF3IP1-201ENST00000373327 CLDN17P56750 224 aa16■□□□□ 0.15
TRAF3IP1-201ENST00000373327 BDH1Q02338 343 aa16■□□□□ 0.15
TRAF3IP1-201ENST00000373327 SLC9A3R2Q15599 337 aa16■□□□□ 0.15
TRAF3IP1-201ENST00000373327 LYSMD4Q5XG99 296 aa16■□□□□ 0.15
TRAF3IP1-201ENST00000373327 DMKNQ6E0U4 476 aaPredicted RBP16■□□□□ 0.15
TRAF3IP1-201ENST00000373327 SLC22A8Q8TCC7 542 aa16■□□□□ 0.15
TRAF3IP1-201ENST00000373327 NUDCD2Q8WVJ2 157 aa16■□□□□ 0.15
TRAF3IP1-201ENST00000373327 ZNRF4Q8WWF5 429 aa16■□□□□ 0.15
TRAF3IP1-201ENST00000373327 MAFIPQ8WZ33 124 aa16■□□□□ 0.15
TRAF3IP1-201ENST00000373327 ABHD6Q9BV23 337 aa16■□□□□ 0.15
TRAF3IP1-201ENST00000373327 NIPAL2Q9H841 368 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms