RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 C1QTNF2Q9BXJ5 285 aa8.68□□□□□ -1.02
SF3A3-201ENST00000373019 CRLF2Q9HC73 371 aa8.68□□□□□ -1.02
SF3A3-201ENST00000373019 KCNG2Q9UJ96 466 aa8.68□□□□□ -1.02
SF3A3-201ENST00000373019 STARD10Q9Y365 291 aa8.68□□□□□ -1.02
SF3A3-201ENST00000373019 PTPRZ1P23471 2315 aaPredicted RBP8.68□□□□□ -1.02
SF3A3-201ENST00000373019 SLC16A8O95907 504 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 PSMB6P28072 239 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 MSX1P28360 303 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 APLNRP35414 380 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 CRYBB1P53674 252 aaPredicted RBP8.67□□□□□ -1.02
SF3A3-201ENST00000373019 LTBQ06643 244 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 CNTN1Q12860 1018 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 SRSF5Q13243 272 aaKnown RBP8.67□□□□□ -1.02
SF3A3-201ENST00000373019 THSD4Q6ZMP0 1018 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 STAC2Q6ZMT1 411 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 BHLHE23Q8NDY6 225 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 OR13C8Q8NGS7 320 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 OR5K2Q8NHB8 316 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 FOXRED1Q96CU9 486 aaPredicted RBP8.67□□□□□ -1.02
SF3A3-201ENST00000373019 RGCCQ9H4X1 137 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 SPACA1Q9HBV2 294 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 BCL2L10Q9HD36 194 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 PRDM7Q9NQW5 492 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 ZDHHC3Q9NYG2 299 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 TBX21Q9UL17 535 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 COLQQ9Y215 455 aaPredicted RBP8.67□□□□□ -1.02
SF3A3-201ENST00000373019 POMT1Q9Y6A1 747 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 PSMD9O00233 223 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 ADAP1O75689 374 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 CD1AP06126 327 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 IMPA1P29218 277 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 PSMB10P40306 273 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 MAP3K8P41279 467 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 CLN3Q13286 438 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 SLC9A5Q14940 896 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 RHEBQ15382 184 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 AMZ1Q400G9 498 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 PRAMEF17Q5VTA0 474 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 RFLNAQ6ZTI6 216 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 LMNTD1Q8N9Z9 388 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 CYB561A3Q8NBI2 242 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 OR1J1Q8NGS3 322 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 GAL3ST3Q96A11 431 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 RNF166Q96A37 237 aaPredicted RBP8.67□□□□□ -1.02
SF3A3-201ENST00000373019 NOL4LQ96MY1 436 aaPredicted RBP8.67□□□□□ -1.02
SF3A3-201ENST00000373019 LRFN5Q96NI6 719 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 CAMK1GQ96NX5 476 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 S100A13Q99584 98 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 SEPT5Q99719 369 aaPredicted RBP8.67□□□□□ -1.02
SF3A3-201ENST00000373019 DDA1Q9BW61 102 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 IL23AQ9NPF7 189 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 CMC2Q9NRP2 79 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 ETV7Q9Y603 341 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 IGLV3-16A0A075B6K0 115 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 EEF1E1-BLOC1S5C9J1V9 151 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 F5H5T6 163 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 M0QYG6 137 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 CTAG2O75638 210 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 WNT11O96014 354 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 GJA4P35212 333 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 FRKP42685 505 aaPredicted RBP8.67□□□□□ -1.02
SF3A3-201ENST00000373019 PPICP45877 212 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 RAC1P63000 192 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 C9orf50Q5SZB4 431 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 ADGRF1Q5T601 910 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 RPL22L1Q6P5R6 122 aaKnown RBP8.67□□□□□ -1.02
SF3A3-201ENST00000373019 ANKRD16Q6P6B7 361 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 VITQ6UXI7 678 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 Q7L0L9 218 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 GDF7Q7Z4P5 450 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 SLC35F3Q8IY50 421 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 SEMA6DQ8NFY4 1073 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 OTUB2Q96DC9 234 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 ARHGDIGQ99819 225 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 SLC25A21Q9BQT8 299 aaPredicted RBP8.67□□□□□ -1.02
SF3A3-201ENST00000373019 SLC17A9Q9BYT1 436 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 ASCL3Q9NQ33 180 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 HAO2Q9NYQ3 351 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 OR14J1Q9UGF5 321 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 MMP24Q9Y5R2 645 aa8.67□□□□□ -1.02
SF3A3-201ENST00000373019 TRIP12Q14669 1992 aaPredicted RBP8.66□□□□□ -1.02
SF3A3-201ENST00000373019 TMEM202A6NGA9 273 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 C9J4A7 227 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 ZNF587BE7ETH6 402 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 PPP1R2P9O14990 202 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 TMEM127O75204 238 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 PLGP00747 810 aaPredicted RBP8.66□□□□□ -1.02
SF3A3-201ENST00000373019 CRYABP02511 175 aaKnown RBP8.66□□□□□ -1.02
SF3A3-201ENST00000373019 CXCL1P09341 107 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 GZMBP10144 247 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 S1PR1P21453 382 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 SNRPNP63162 240 aaKnown RBP8.66□□□□□ -1.02
SF3A3-201ENST00000373019 COL9A2Q14055 689 aaPredicted RBP8.66□□□□□ -1.02
SF3A3-201ENST00000373019 ZNF311Q5JNZ3 666 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 C10orf120Q5SQS8 335 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 HIST2H3AQ71DI3 136 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 VRK2Q86Y07 508 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 ZNF610Q8N9Z0 462 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 ACBD4Q8NC06 268 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 PHYHIPQ92561 330 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms