RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 NPFFR2Q9Y5X5 522 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 SLC5A10A0PJK1 596 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 PRKRAO75569 313 aaKnown RBP10.6□□□□□ -0.71
VCL-202ENST00000372755 SOD1P00441 154 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 OR8G1Q15617 311 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 KDM4DQ6B0I6 523 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 PTCRAQ6ISU1 281 aaPredicted RBP10.6□□□□□ -0.71
VCL-202ENST00000372755 FAM122BQ7Z309 247 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 SEH1LQ96EE3 360 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 USP22Q9UPT9 525 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 C7orf72A4D263 438 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 TRABD2BA6NFA1 517 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 CALCBP10092 127 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 NDUFB7P17568 137 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 F2RP25116 425 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 APEX1P27695 318 aaKnown RBP10.6□□□□□ -0.71
VCL-202ENST00000372755 FCN2Q15485 313 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 C6orf15Q6UXA7 325 aaPredicted RBP10.6□□□□□ -0.71
VCL-202ENST00000372755 CCDC71Q8IV32 467 aaPredicted RBP10.6□□□□□ -0.71
VCL-202ENST00000372755 PLPP7Q8NBV4 271 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 CTRCQ99895 268 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 OR5H15A6NDH6 313 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 OR5H14A6NHG9 310 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 OR5H1A6NKK0 313 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 TNFRSF10CO14798 259 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 VAMP5O95183 116 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 DUSP1P28562 367 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 ELAVL1Q15717 326 aaKnown RBP10.6□□□□□ -0.71
VCL-202ENST00000372755 MPPED2Q15777 294 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 PTRH1Q86Y79 214 aaKnown RBP10.6□□□□□ -0.71
VCL-202ENST00000372755 MARC2Q969Z3 335 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 MOB1AQ9H8S9 216 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 COA3Q9Y2R0 106 aaPredicted RBP10.6□□□□□ -0.71
VCL-202ENST00000372755 H0Y8G0 127 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 CT45A10P0DMU9 189 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 SEC22CQ9BRL7 303 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 C11orf54Q9H0W9 315 aaPredicted RBP10.59□□□□□ -0.71
VCL-202ENST00000372755 UBQLN3Q9H347 655 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 GMPR2Q9P2T1 348 aaKnown RBP10.59□□□□□ -0.71
VCL-202ENST00000372755 I6L893 689 aaPredicted RBP10.59□□□□□ -0.71
VCL-202ENST00000372755 POU3F3P20264 500 aaPredicted RBP10.59□□□□□ -0.71
VCL-202ENST00000372755 NDUFA6P56556 154 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 SPRED3Q2MJR0 410 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 TFAP2EQ6VUC0 442 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 TMEM102Q8N9M5 508 aaPredicted RBP10.59□□□□□ -0.71
VCL-202ENST00000372755 OR2G3Q8NGZ4 309 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 SCARB1Q8WTV0 552 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 THOC3Q96J01 351 aaKnown RBP10.59□□□□□ -0.71
VCL-202ENST00000372755 ZBP1Q9H171 429 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 SCPEP1Q9HB40 452 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 SEC14L6B5MCN3 397 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 NXPH3O95157 252 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 FAM26DQ5JW98 314 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 CD276Q5ZPR3 534 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 OR8G2PQ6IF36 304 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 C1QTNF3Q9BXJ4 246 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 LANCL2Q9NS86 450 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 B3GALT5Q9Y2C3 310 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 POLDIP2Q9Y2S7 368 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 ZNF142P52746 1687 aaPredicted RBP10.59□□□□□ -0.71
VCL-202ENST00000372755 PRAMEF5Q5TYX0 476 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 PRAMEF6Q5VXH4 476 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 FCRL6Q6DN72 434 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 PAQR9Q6ZVX9 377 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 C1orf87Q8N0U7 546 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 SUMF1Q8NBK3 374 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 OR13C8Q8NGS7 320 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 TMEM174Q8WUU8 243 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 GAB3Q8WWW8 586 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 OR5M11Q96RB7 305 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 LYSMD1Q96S90 227 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 NIPSNAP1Q9BPW8 284 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 TAF9BQ9HBM6 251 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 KIAA1456Q9P272 454 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 PMS2P1A4D2B8 440 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 OR6C76A6NM76 312 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 PPP1R2P9O14990 202 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 ANGPTL7O43827 346 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 F10P00742 488 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 THBS1P07996 1170 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 RBP2P50120 134 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 PFN3P60673 137 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 Q6ZSR9 355 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 CPEB2Q7Z5Q1 589 aaKnown RBP10.59□□□□□ -0.71
VCL-202ENST00000372755 AMIGO3Q86WK7 504 aa10.59□□□□□ -0.71
VCL-202ENST00000372755 CACNA1FO60840 1977 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 ZFP92A6NM28 416 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 NUDT19A8MXV4 375 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 RPA2P15927 270 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 TEAD1P28347 426 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 NKX2-1P43699 371 aaPredicted RBP10.58□□□□□ -0.72
VCL-202ENST00000372755 CCR6P51684 374 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 OR1D5P58170 312 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 ERVFC1P60507 584 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 GPR85P60893 370 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 TMUB2Q71RG4 321 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 RPS19BP1Q86WX3 136 aaKnown RBP10.58□□□□□ -0.72
VCL-202ENST00000372755 OR13H1Q8NG92 308 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 LRFN5Q96NI6 719 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 CHST11Q9NPF2 352 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms