RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 EMC7Q9NPA0 242 aa20.33■□□□□ 0.84
TM9SF3-201ENST00000371142 HEYLQ9NQ87 328 aaPredicted RBP20.33■□□□□ 0.84
TM9SF3-201ENST00000371142 WASH6PQ9NQA3 447 aa20.33■□□□□ 0.84
TM9SF3-201ENST00000371142 PURGQ9UJV8 347 aaKnown RBP20.33■□□□□ 0.84
TM9SF3-201ENST00000371142 SLC35G3Q8N808 338 aa20.32■□□□□ 0.84
TM9SF3-201ENST00000371142 MT-ATP6P00846 226 aa20.32■□□□□ 0.84
TM9SF3-201ENST00000371142 CLEC3BP05452 202 aa20.32■□□□□ 0.84
TM9SF3-201ENST00000371142 CBR1P16152 277 aa20.32■□□□□ 0.84
TM9SF3-201ENST00000371142 ZNF133P52736 654 aaPredicted RBP20.32■□□□□ 0.84
TM9SF3-201ENST00000371142 ZNF468Q5VIY5 522 aaPredicted RBP20.32■□□□□ 0.84
TM9SF3-201ENST00000371142 LAMB4A4D0S4 1761 aa20.32■□□□□ 0.84
TM9SF3-201ENST00000371142 H0Y8G0 127 aa20.32■□□□□ 0.84
TM9SF3-201ENST00000371142 SGCEO43556 437 aa20.32■□□□□ 0.84
TM9SF3-201ENST00000371142 ATP1B1P05026 303 aa20.32■□□□□ 0.84
TM9SF3-201ENST00000371142 CALCBP10092 127 aa20.32■□□□□ 0.84
TM9SF3-201ENST00000371142 ZNF77Q15935 545 aa20.32■□□□□ 0.84
TM9SF3-201ENST00000371142 RTN4RL1Q86UN2 441 aaPredicted RBP20.32■□□□□ 0.84
TM9SF3-201ENST00000371142 SEMA6DQ8NFY4 1073 aa20.32■□□□□ 0.84
TM9SF3-201ENST00000371142 MZB1Q8WU39 189 aa20.32■□□□□ 0.84
TM9SF3-201ENST00000371142 PATZ1Q9HBE1 687 aaKnown RBP20.32■□□□□ 0.84
TM9SF3-201ENST00000371142 ZNF75AQ96N20 296 aa20.32■□□□□ 0.84
TM9SF3-201ENST00000371142 TRABD2BA6NFA1 517 aa20.31■□□□□ 0.84
TM9SF3-201ENST00000371142 GSK3AP49840 483 aa20.31■□□□□ 0.84
TM9SF3-201ENST00000371142 C9orf152Q5JTZ5 239 aa20.31■□□□□ 0.84
TM9SF3-201ENST00000371142 GDPD3Q7L5L3 318 aa20.31■□□□□ 0.84
TM9SF3-201ENST00000371142 PATE1Q8WXA2 126 aa20.31■□□□□ 0.84
TM9SF3-201ENST00000371142 C1QTNF3Q9BXJ4 246 aa20.31■□□□□ 0.84
TM9SF3-201ENST00000371142 TAS2R4Q9NYW5 299 aa20.31■□□□□ 0.84
TM9SF3-201ENST00000371142 MICAL3Q7RTP6 2002 aa20.31■□□□□ 0.84
TM9SF3-201ENST00000371142 OR2A25A4D2G3 310 aa20.31■□□□□ 0.84
TM9SF3-201ENST00000371142 E9PI62 339 aa20.31■□□□□ 0.84
TM9SF3-201ENST00000371142 GPR171O14626 319 aa20.31■□□□□ 0.84
TM9SF3-201ENST00000371142 MRPL19P49406 292 aaKnown RBP20.31■□□□□ 0.84
TM9SF3-201ENST00000371142 SAXO2Q658L1 398 aa20.31■□□□□ 0.84
TM9SF3-201ENST00000371142 BARHL1Q9BZE3 327 aa20.31■□□□□ 0.84
TM9SF3-201ENST00000371142 M0R082 166 aa20.31■□□□□ 0.84
TM9SF3-201ENST00000371142 CCSO14618 274 aa20.31■□□□□ 0.84
TM9SF3-201ENST00000371142 B4GALT3O60512 393 aa20.31■□□□□ 0.84
TM9SF3-201ENST00000371142 CNR1P21554 472 aa20.31■□□□□ 0.84
TM9SF3-201ENST00000371142 PXT1Q8NFP0 134 aa20.31■□□□□ 0.84
TM9SF3-201ENST00000371142 AGFG1P52594 562 aaKnown RBP20.31■□□□□ 0.84
TM9SF3-201ENST00000371142 OR8G2PQ6IF36 304 aa20.31■□□□□ 0.84
TM9SF3-201ENST00000371142 IFI44Q8TCB0 444 aa20.31■□□□□ 0.84
TM9SF3-201ENST00000371142 ARV1Q9H2C2 271 aa20.31■□□□□ 0.84
TM9SF3-201ENST00000371142 OPA3Q9H6K4 179 aa20.31■□□□□ 0.84
TM9SF3-201ENST00000371142 NPAP1Q9NZP6 1156 aa20.31■□□□□ 0.84
TM9SF3-201ENST00000371142 HRH3Q9Y5N1 445 aa20.31■□□□□ 0.84
TM9SF3-201ENST00000371142 RNF141Q8WVD5 230 aa20.31■□□□□ 0.84
TM9SF3-201ENST00000371142 CSF3RQ99062 836 aa20.31■□□□□ 0.84
TM9SF3-201ENST00000371142 PLK3Q9H4B4 646 aa20.31■□□□□ 0.84
TM9SF3-201ENST00000371142 AQP7O14520 342 aa20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 ARNTP27540 789 aa20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 ETV1P50549 477 aa20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 PYCR3Q53H96 274 aa20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 TAS2R5Q9NYW4 299 aa20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 LRRC30A6NM36 301 aa20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 FOSL1P15407 271 aa20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 HMGA1P17096 107 aaKnown RBP20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 IL3RAP26951 378 aa20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 YOD1Q5VVQ6 348 aaPredicted RBP20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 MAML2Q8IZL2 1156 aaPredicted RBP20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 BCORP1Q8N888 145 aa20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 NANPQ8TBE9 248 aa20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 SSUH2Q9Y2M2 353 aa20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 NPFFR2Q9Y5X5 522 aa20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 NUP98P52948 1817 aa20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 FITM1A5D6W6 292 aa20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 SNRPGP62308 76 aaKnown RBP20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 ARL16Q0P5N6 197 aa20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 OR51S1Q8NGJ8 323 aa20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 KIRREL1Q96J84 757 aa20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 TCEAL7Q9BRU2 100 aa20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 DEFB127Q9H1M4 99 aa20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 SMCO4Q9NRQ5 59 aa20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 STMND1H3BQB6 276 aa20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 HMGN4O00479 90 aa20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 LGI1O95970 557 aa20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 IGFBP1P08833 259 aaPredicted RBP20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 C6orf15Q6UXA7 325 aaPredicted RBP20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 ARSGQ96EG1 525 aa20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 RNF170Q96K19 258 aa20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 ZDHHC5Q9C0B5 715 aa20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 PTTG3PQ9NZH4 202 aa20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 RRP8O43159 456 aaKnown RBP20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 GUSBP08236 651 aa20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 OR10J4P0C629 311 aa20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 NLRP8Q86W28 1048 aa20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 SEMA4CQ9C0C4 833 aa20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 DAPP1Q9UN19 280 aa20.3■□□□□ 0.84
TM9SF3-201ENST00000371142 IGHV3-64DA0A0J9YX35 117 aa20.29■□□□□ 0.84
TM9SF3-201ENST00000371142 A0A1W2PR48 441 aa20.29■□□□□ 0.84
TM9SF3-201ENST00000371142 SOD1P00441 154 aa20.29■□□□□ 0.84
TM9SF3-201ENST00000371142 NDUFB7P17568 137 aa20.29■□□□□ 0.84
TM9SF3-201ENST00000371142 RPS19P39019 145 aaKnown RBP20.29■□□□□ 0.84
TM9SF3-201ENST00000371142 RPL11P62913 178 aaKnown RBP20.29■□□□□ 0.84
TM9SF3-201ENST00000371142 IHHQ14623 411 aa20.29■□□□□ 0.84
TM9SF3-201ENST00000371142 ELAVL1Q15717 326 aaKnown RBP20.29■□□□□ 0.84
TM9SF3-201ENST00000371142 INTS12Q96CB8 462 aaKnown RBP20.29■□□□□ 0.84
TM9SF3-201ENST00000371142 ASB16Q96NS5 453 aa20.29■□□□□ 0.84
TM9SF3-201ENST00000371142 TEAD3Q99594 435 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms