RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 SRYQ05066 204 aa14.59□□□□□ -0.07
COL17A1-202ENST00000369733 CAMKMTQ7Z624 323 aa14.59□□□□□ -0.07
COL17A1-202ENST00000369733 KIAA0907Q7Z7F0 614 aaPredicted RBP14.59□□□□□ -0.07
COL17A1-202ENST00000369733 OR1M1Q8NGA1 313 aa14.59□□□□□ -0.07
COL17A1-202ENST00000369733 HSD17B8Q92506 261 aa14.59□□□□□ -0.07
COL17A1-202ENST00000369733 ORAI1Q96D31 301 aa14.59□□□□□ -0.07
COL17A1-202ENST00000369733 A0A087WZY1 265 aa14.59□□□□□ -0.07
COL17A1-202ENST00000369733 LOC102725191A0A1B0GVB3 256 aa14.59□□□□□ -0.07
COL17A1-202ENST00000369733 SNRPNP63162 240 aaKnown RBP14.59□□□□□ -0.07
COL17A1-202ENST00000369733 FCRL6Q6DN72 434 aa14.59□□□□□ -0.07
COL17A1-202ENST00000369733 NPSR1Q6W5P4 371 aa14.59□□□□□ -0.07
COL17A1-202ENST00000369733 GLDNQ6ZMI3 551 aaPredicted RBP14.59□□□□□ -0.07
COL17A1-202ENST00000369733 C19orf47Q8N9M1 422 aaKnown RBP14.59□□□□□ -0.07
COL17A1-202ENST00000369733 GOT1L1Q8NHS2 421 aaPredicted RBP14.59□□□□□ -0.07
COL17A1-202ENST00000369733 TAAR5O14804 337 aa14.59□□□□□ -0.07
COL17A1-202ENST00000369733 PHF1O43189 567 aaPredicted RBP14.59□□□□□ -0.07
COL17A1-202ENST00000369733 OR7C1O76099 320 aaPredicted RBP14.59□□□□□ -0.07
COL17A1-202ENST00000369733 MSX1P28360 303 aa14.59□□□□□ -0.07
COL17A1-202ENST00000369733 ECI1P42126 302 aa14.59□□□□□ -0.07
COL17A1-202ENST00000369733 OPN5Q6U736 354 aa14.59□□□□□ -0.07
COL17A1-202ENST00000369733 NAA40Q86UY6 237 aa14.59□□□□□ -0.07
COL17A1-202ENST00000369733 NANPQ8TBE9 248 aa14.59□□□□□ -0.07
COL17A1-202ENST00000369733 MEIKINA0A087WXM9 373 aa14.59□□□□□ -0.07
COL17A1-202ENST00000369733 TMEM235A6NFC5 223 aa14.59□□□□□ -0.07
COL17A1-202ENST00000369733 NME2P1O60361 137 aa14.59□□□□□ -0.07
COL17A1-202ENST00000369733 GALR3O60755 368 aaPredicted RBP14.59□□□□□ -0.07
COL17A1-202ENST00000369733 CHRM2P08172 466 aa14.59□□□□□ -0.07
COL17A1-202ENST00000369733 BIDP55957 195 aa14.59□□□□□ -0.07
COL17A1-202ENST00000369733 TAS2R30P59541 319 aa14.59□□□□□ -0.07
COL17A1-202ENST00000369733 ST3GAL2Q16842 350 aa14.59□□□□□ -0.07
COL17A1-202ENST00000369733 RBMS3Q6XE24 437 aaKnown RBP14.59□□□□□ -0.07
COL17A1-202ENST00000369733 OR4C16Q8NGL9 310 aa14.59□□□□□ -0.07
COL17A1-202ENST00000369733 ARSGQ96EG1 525 aa14.59□□□□□ -0.07
COL17A1-202ENST00000369733 SHDQ96IW2 340 aa14.59□□□□□ -0.07
COL17A1-202ENST00000369733 ZNF578Q96N58 590 aaPredicted RBP14.59□□□□□ -0.07
COL17A1-202ENST00000369733 TPSD1Q9BZJ3 242 aa14.59□□□□□ -0.07
COL17A1-202ENST00000369733 SHROOM3Q8TF72 1996 aa14.58□□□□□ -0.07
COL17A1-202ENST00000369733 CTNSO60931 367 aa14.58□□□□□ -0.07
COL17A1-202ENST00000369733 OR2C1O95371 312 aa14.58□□□□□ -0.07
COL17A1-202ENST00000369733 S100A8P05109 93 aa14.58□□□□□ -0.07
COL17A1-202ENST00000369733 SRPXP78539 464 aa14.58□□□□□ -0.07
COL17A1-202ENST00000369733 DEFB133Q30KQ1 61 aa14.58□□□□□ -0.07
COL17A1-202ENST00000369733 RTN4RL1Q86UN2 441 aaPredicted RBP14.58□□□□□ -0.07
COL17A1-202ENST00000369733 TMEM217Q8N7C4 229 aa14.58□□□□□ -0.07
COL17A1-202ENST00000369733 LFNGQ8NES3 379 aa14.58□□□□□ -0.07
COL17A1-202ENST00000369733 OR8D4Q8NGM9 314 aa14.58□□□□□ -0.07
COL17A1-202ENST00000369733 RAB39BQ96DA2 213 aa14.58□□□□□ -0.07
COL17A1-202ENST00000369733 SPACA1Q9HBV2 294 aa14.58□□□□□ -0.07
COL17A1-202ENST00000369733 GCM1Q9NP62 436 aa14.58□□□□□ -0.07
COL17A1-202ENST00000369733 SERTAD4Q9NUC0 356 aa14.58□□□□□ -0.07
COL17A1-202ENST00000369733 PLEKHM1Q9Y4G2 1056 aa14.58□□□□□ -0.07
COL17A1-202ENST00000369733 HBQ1P09105 142 aa14.58□□□□□ -0.08
COL17A1-202ENST00000369733 RPP30P78346 268 aaKnown RBP14.58□□□□□ -0.08
COL17A1-202ENST00000369733 PLPP6Q8IY26 295 aa14.58□□□□□ -0.08
COL17A1-202ENST00000369733 ANKRD53Q8N9V6 530 aa14.58□□□□□ -0.08
COL17A1-202ENST00000369733 LCORQ96JN0 433 aaPredicted RBP14.58□□□□□ -0.08
COL17A1-202ENST00000369733 PRELID3BQ9Y3B1 194 aa14.58□□□□□ -0.08
COL17A1-202ENST00000369733 CCDC85CA6NKD9 419 aa14.58□□□□□ -0.08
COL17A1-202ENST00000369733 HSBP1L1C9JCN9 74 aa14.58□□□□□ -0.08
COL17A1-202ENST00000369733 DDAH2O95865 285 aa14.58□□□□□ -0.08
COL17A1-202ENST00000369733 ARL3P36405 182 aa14.58□□□□□ -0.08
COL17A1-202ENST00000369733 ERVK-16P61578 105 aa14.58□□□□□ -0.08
COL17A1-202ENST00000369733 C2orf76Q3KRA6 126 aa14.58□□□□□ -0.08
COL17A1-202ENST00000369733 SFRP5Q5T4F7 317 aa14.58□□□□□ -0.08
COL17A1-202ENST00000369733 PRSS35Q8N3Z0 413 aa14.58□□□□□ -0.08
COL17A1-202ENST00000369733 MRPL43Q8N983 215 aaKnown RBP14.58□□□□□ -0.08
COL17A1-202ENST00000369733 SECTM1Q8WVN6 248 aa14.58□□□□□ -0.08
COL17A1-202ENST00000369733 FGF13Q92913 245 aa14.58□□□□□ -0.08
COL17A1-202ENST00000369733 BADQ92934 168 aa14.58□□□□□ -0.08
COL17A1-202ENST00000369733 MARVELD1Q9BSK0 173 aa14.58□□□□□ -0.08
COL17A1-202ENST00000369733 CUTCQ9NTM9 273 aa14.58□□□□□ -0.08
COL17A1-202ENST00000369733 GDE1Q9NZC3 331 aa14.58□□□□□ -0.08
COL17A1-202ENST00000369733 NHSQ6T4R5 1651 aa14.58□□□□□ -0.08
COL17A1-202ENST00000369733 NUMA1Q14980 2115 aa14.58□□□□□ -0.08
COL17A1-202ENST00000369733 BCL2L11O43521 198 aa14.58□□□□□ -0.08
COL17A1-202ENST00000369733 RAB30Q15771 203 aa14.58□□□□□ -0.08
COL17A1-202ENST00000369733 MKXQ8IYA7 352 aa14.58□□□□□ -0.08
COL17A1-202ENST00000369733 ZNF296Q8WUU4 475 aaPredicted RBP14.58□□□□□ -0.08
COL17A1-202ENST00000369733 TCTN2Q96GX1 697 aa14.58□□□□□ -0.08
COL17A1-202ENST00000369733 ULBP2Q9BZM5 246 aa14.58□□□□□ -0.08
COL17A1-202ENST00000369733 LYRM4Q9HD34 91 aa14.58□□□□□ -0.08
COL17A1-202ENST00000369733 COA3Q9Y2R0 106 aaPredicted RBP14.58□□□□□ -0.08
COL17A1-202ENST00000369733 MYH14Q7Z406 1995 aaKnown RBP14.57□□□□□ -0.08
COL17A1-202ENST00000369733 TRBV11-1A0A0K0K1C0 115 aa14.57□□□□□ -0.08
COL17A1-202ENST00000369733 OR6C76A6NM76 312 aa14.57□□□□□ -0.08
COL17A1-202ENST00000369733 CD79AP11912 226 aa14.57□□□□□ -0.08
COL17A1-202ENST00000369733 AGERQ15109 404 aa14.57□□□□□ -0.08
COL17A1-202ENST00000369733 ADGRG3Q86Y34 549 aa14.57□□□□□ -0.08
COL17A1-202ENST00000369733 BAP18Q8IXM2 172 aa14.57□□□□□ -0.08
COL17A1-202ENST00000369733 RSC1A1Q92681 617 aa14.57□□□□□ -0.08
COL17A1-202ENST00000369733 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.57□□□□□ -0.08
COL17A1-202ENST00000369733 ANKRD30BLA7E2S9 258 aa14.57□□□□□ -0.08
COL17A1-202ENST00000369733 UMAD1C9J7I0 102 aa14.57□□□□□ -0.08
COL17A1-202ENST00000369733 DCTN6O00399 190 aa14.57□□□□□ -0.08
COL17A1-202ENST00000369733 INSL4Q14641 139 aa14.57□□□□□ -0.08
COL17A1-202ENST00000369733 ASB13Q8WXK3 278 aa14.57□□□□□ -0.08
COL17A1-202ENST00000369733 DAPP1Q9UN19 280 aa14.57□□□□□ -0.08
COL17A1-202ENST00000369733 LOC107986453A0A1B0GWG9 222 aa14.57□□□□□ -0.08
COL17A1-202ENST00000369733 PYCARD-AS1I3L0S3 204 aa14.57□□□□□ -0.08
COL17A1-202ENST00000369733 TXNDC12O95881 172 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms