RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 CLDN17P56750 224 aa10.74□□□□□ -0.69
MRPL55-209ENST00000366735 SMIM11AP58511 58 aa10.74□□□□□ -0.69
MRPL55-209ENST00000366735 IL1RL1Q01638 556 aa10.74□□□□□ -0.69
MRPL55-209ENST00000366735 NPRL3Q12980 569 aa10.74□□□□□ -0.69
MRPL55-209ENST00000366735 RFX4Q33E94 735 aa10.74□□□□□ -0.69
MRPL55-209ENST00000366735 COMTD1Q86VU5 262 aa10.74□□□□□ -0.69
MRPL55-209ENST00000366735 ZNF786Q8N393 782 aa10.74□□□□□ -0.69
MRPL55-209ENST00000366735 OR4D11Q8NGI4 311 aa10.74□□□□□ -0.69
MRPL55-209ENST00000366735 TFAP2CQ92754 450 aa10.74□□□□□ -0.69
MRPL55-209ENST00000366735 SLC38A4Q969I6 547 aa10.74□□□□□ -0.69
MRPL55-209ENST00000366735 SLC25A36Q96CQ1 311 aa10.74□□□□□ -0.69
MRPL55-209ENST00000366735 NR1H4Q96RI1 486 aaPredicted RBP10.74□□□□□ -0.69
MRPL55-209ENST00000366735 ZFAND3Q9H8U3 227 aa10.74□□□□□ -0.69
MRPL55-209ENST00000366735 C12orf10Q9HB07 376 aa10.74□□□□□ -0.69
MRPL55-209ENST00000366735 B3GAT2Q9NPZ5 323 aa10.74□□□□□ -0.69
MRPL55-209ENST00000366735 TMEFF2Q9UIK5 374 aaPredicted RBP10.74□□□□□ -0.69
MRPL55-209ENST00000366735 SLC13A4Q9UKG4 626 aa10.74□□□□□ -0.69
MRPL55-209ENST00000366735 CHST2Q9Y4C5 530 aa10.74□□□□□ -0.69
MRPL55-209ENST00000366735 ARRDC5A6NEK1 342 aa10.73□□□□□ -0.69
MRPL55-209ENST00000366735 H0YAE9 185 aa10.73□□□□□ -0.69
MRPL55-209ENST00000366735 TNFRSF11BO00300 401 aa10.73□□□□□ -0.69
MRPL55-209ENST00000366735 FFAR1O14842 300 aa10.73□□□□□ -0.69
MRPL55-209ENST00000366735 NPIPB7O75200 414 aa10.73□□□□□ -0.69
MRPL55-209ENST00000366735 IFNGR1P15260 489 aa10.73□□□□□ -0.69
MRPL55-209ENST00000366735 CALCRP30988 508 aa10.73□□□□□ -0.69
MRPL55-209ENST00000366735 ACAA2P42765 397 aaKnown RBP10.73□□□□□ -0.69
MRPL55-209ENST00000366735 RPS5P46782 204 aaKnown RBP10.73□□□□□ -0.69
MRPL55-209ENST00000366735 RPS23P62266 143 aaKnown RBP10.73□□□□□ -0.69
MRPL55-209ENST00000366735 TUBA1BP68363 451 aa10.73□□□□□ -0.69
MRPL55-209ENST00000366735 TUBA4AP68366 448 aa10.73□□□□□ -0.69
MRPL55-209ENST00000366735 POU3F1Q03052 451 aaPredicted RBP10.73□□□□□ -0.69
MRPL55-209ENST00000366735 SNTB2Q13425 540 aaKnown RBP10.73□□□□□ -0.69
MRPL55-209ENST00000366735 MED21Q13503 144 aa10.73□□□□□ -0.69
MRPL55-209ENST00000366735 MFSD13AQ14CX5 517 aa10.73□□□□□ -0.69
MRPL55-209ENST00000366735 FAM69AQ5T7M9 428 aa10.73□□□□□ -0.69
MRPL55-209ENST00000366735 FAHD1Q6P587 224 aa10.73□□□□□ -0.69
MRPL55-209ENST00000366735 TUBA1AQ71U36 451 aa10.73□□□□□ -0.69
MRPL55-209ENST00000366735 UBASH3BQ8TF42 649 aa10.73□□□□□ -0.69
MRPL55-209ENST00000366735 OXGR1Q96P68 337 aa10.73□□□□□ -0.69
MRPL55-209ENST00000366735 SNX18Q96RF0 628 aa10.73□□□□□ -0.69
MRPL55-209ENST00000366735 POLR2J2Q9GZM3 115 aaKnown RBP10.73□□□□□ -0.69
MRPL55-209ENST00000366735 POLR2J3Q9H1A7 115 aaKnown RBP10.73□□□□□ -0.69
MRPL55-209ENST00000366735 NELFAQ9H3P2 528 aa10.73□□□□□ -0.69
MRPL55-209ENST00000366735 CRLF2Q9HC73 371 aa10.73□□□□□ -0.69
MRPL55-209ENST00000366735 SELENONQ9NZV5 590 aa10.73□□□□□ -0.69
MRPL55-209ENST00000366735 CMAHPQ9Y471 501 aa10.73□□□□□ -0.69
MRPL55-209ENST00000366735 NOX1Q9Y5S8 564 aa10.73□□□□□ -0.69
MRPL55-209ENST00000366735 U3KQV3 271 aa10.73□□□□□ -0.69
MRPL55-209ENST00000366735 ANK2Q01484 3957 aa10.73□□□□□ -0.69
MRPL55-209ENST00000366735 SVEP1Q4LDE5 3571 aa10.72□□□□□ -0.69
MRPL55-209ENST00000366735 IGHV2OR16-5A0A0B4J2B6 119 aa10.72□□□□□ -0.69
MRPL55-209ENST00000366735 A0A1W2PRQ8 180 aa10.72□□□□□ -0.69
MRPL55-209ENST00000366735 LRP5LA4QPB2 252 aa10.72□□□□□ -0.69
MRPL55-209ENST00000366735 ZNF99A8MXY4 864 aaPredicted RBP10.72□□□□□ -0.69
MRPL55-209ENST00000366735 FTCDNL1E5RQL4 147 aa10.72□□□□□ -0.69
MRPL55-209ENST00000366735 J3KTA2 159 aa10.72□□□□□ -0.69
MRPL55-209ENST00000366735 M0R233 179 aa10.72□□□□□ -0.69
MRPL55-209ENST00000366735 TPD52L2O43399 206 aaKnown RBP10.72□□□□□ -0.69
MRPL55-209ENST00000366735 GADD45GO95257 159 aa10.72□□□□□ -0.69
MRPL55-209ENST00000366735 H1F0P07305 194 aaKnown RBP10.72□□□□□ -0.69
MRPL55-209ENST00000366735 THRBP10828 461 aa10.72□□□□□ -0.69
MRPL55-209ENST00000366735 THBS4P35443 961 aa10.72□□□□□ -0.69
MRPL55-209ENST00000366735 RAD23AP54725 363 aa10.72□□□□□ -0.69
MRPL55-209ENST00000366735 DVL1P1P54792 670 aaPredicted RBP10.72□□□□□ -0.69
MRPL55-209ENST00000366735 CDH15P55291 814 aa10.72□□□□□ -0.69
MRPL55-209ENST00000366735 ADARB1P78563 741 aaKnown RBP10.72□□□□□ -0.69
MRPL55-209ENST00000366735 SPIBQ01892 262 aa10.72□□□□□ -0.69
MRPL55-209ENST00000366735 LGALS3BPQ08380 585 aa10.72□□□□□ -0.69
MRPL55-209ENST00000366735 DGCR6Q14129 220 aa10.72□□□□□ -0.69
MRPL55-209ENST00000366735 NPTX1Q15818 432 aa10.72□□□□□ -0.69
MRPL55-209ENST00000366735 CEACAM16Q2WEN9 425 aa10.72□□□□□ -0.69
MRPL55-209ENST00000366735 KDM4DQ6B0I6 523 aa10.72□□□□□ -0.69
MRPL55-209ENST00000366735 GLCCI1Q86VQ1 547 aa10.72□□□□□ -0.69
MRPL55-209ENST00000366735 RBM45Q8IUH3 476 aaKnown RBP10.72□□□□□ -0.69
MRPL55-209ENST00000366735 HS3ST5Q8IZT8 346 aa10.72□□□□□ -0.69
MRPL55-209ENST00000366735 CLIP4Q8N3C7 705 aa10.72□□□□□ -0.69
MRPL55-209ENST00000366735 DHRSXQ8N5I4 330 aa10.72□□□□□ -0.69
MRPL55-209ENST00000366735 TEX29Q8N6K0 151 aa10.72□□□□□ -0.69
MRPL55-209ENST00000366735 OR6T1Q8NGN1 323 aa10.72□□□□□ -0.69
MRPL55-209ENST00000366735 GIPC3Q8TF64 312 aa10.72□□□□□ -0.69
MRPL55-209ENST00000366735 PRRC1Q96M27 445 aa10.72□□□□□ -0.69
MRPL55-209ENST00000366735 WFDC6Q9BQY6 131 aa10.72□□□□□ -0.69
MRPL55-209ENST00000366735 FUZQ9BT04 418 aa10.72□□□□□ -0.69
MRPL55-209ENST00000366735 ADI1Q9BV57 179 aa10.72□□□□□ -0.69
MRPL55-209ENST00000366735 ANKRD60Q9BZ19 345 aa10.72□□□□□ -0.69
MRPL55-209ENST00000366735 ANKRD19PQ9H560 264 aa10.72□□□□□ -0.69
MRPL55-209ENST00000366735 NMNAT1Q9HAN9 279 aaPredicted RBP10.72□□□□□ -0.69
MRPL55-209ENST00000366735 SMURF2Q9HAU4 748 aa10.72□□□□□ -0.69
MRPL55-209ENST00000366735 GPR35Q9HC97 309 aa10.72□□□□□ -0.69
MRPL55-209ENST00000366735 PDP1Q9P0J1 537 aaPredicted RBP10.72□□□□□ -0.69
MRPL55-209ENST00000366735 FBXL3Q9UKT7 428 aa10.72□□□□□ -0.69
MRPL55-209ENST00000366735 A4GNTQ9UNA3 340 aa10.72□□□□□ -0.69
MRPL55-209ENST00000366735 DYSFO75923 2080 aa10.72□□□□□ -0.69
MRPL55-209ENST00000366735 A0A0A6YYJ9 748 aa10.71□□□□□ -0.69
MRPL55-209ENST00000366735 B4DSR2 109 aa10.71□□□□□ -0.69
MRPL55-209ENST00000366735 M0R3H8 397 aa10.71□□□□□ -0.69
MRPL55-209ENST00000366735 SYNGR3O43761 229 aa10.71□□□□□ -0.69
MRPL55-209ENST00000366735 FMO6PO60774 539 aa10.71□□□□□ -0.69
MRPL55-209ENST00000366735 ZNF432O94892 652 aa10.71□□□□□ -0.69
MRPL55-209ENST00000366735 ANXA8P13928 327 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms