RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 MRPL28Q13084 256 aaKnown RBP2.06□□□□□ -2.08
RNU4-28P-201ENST00000364739 CCDC152Q4G0S7 254 aa2.06□□□□□ -2.08
RNU4-28P-201ENST00000364739 KCTD21Q4G0X4 260 aa2.06□□□□□ -2.08
RNU4-28P-201ENST00000364739 ARL9Q6T311 187 aa2.06□□□□□ -2.08
RNU4-28P-201ENST00000364739 PLET1Q6UQ28 207 aa2.06□□□□□ -2.08
RNU4-28P-201ENST00000364739 TEX43Q6ZNM6 134 aa2.06□□□□□ -2.08
RNU4-28P-201ENST00000364739 OAFQ86UD1 273 aa2.06□□□□□ -2.08
RNU4-28P-201ENST00000364739 LRP11Q86VZ4 500 aa2.06□□□□□ -2.08
RNU4-28P-201ENST00000364739 NOXO1Q8NFA2 376 aa2.06□□□□□ -2.08
RNU4-28P-201ENST00000364739 OR8U1Q8NH10 309 aa2.06□□□□□ -2.08
RNU4-28P-201ENST00000364739 PLEKHA8Q96JA3 519 aa2.06□□□□□ -2.08
RNU4-28P-201ENST00000364739 PSKH2Q96QS6 385 aa2.06□□□□□ -2.08
RNU4-28P-201ENST00000364739 NIPAL2Q9H841 368 aa2.06□□□□□ -2.08
RNU4-28P-201ENST00000364739 SEC16AO15027 2179 aa2.06□□□□□ -2.08
RNU4-28P-201ENST00000364739 A0A0B4J2A0 478 aa2.05□□□□□ -2.08
RNU4-28P-201ENST00000364739 ANGPT2O15123 496 aa2.05□□□□□ -2.08
RNU4-28P-201ENST00000364739 GCM2O75603 506 aaPredicted RBP2.05□□□□□ -2.08
RNU4-28P-201ENST00000364739 RHOBTB1O94844 696 aa2.05□□□□□ -2.08
RNU4-28P-201ENST00000364739 UBTFL6P0CB48 400 aaPredicted RBP2.05□□□□□ -2.08
RNU4-28P-201ENST00000364739 CALM1P0DP23 149 aa2.05□□□□□ -2.08
RNU4-28P-201ENST00000364739 CALM2P0DP24 149 aa2.05□□□□□ -2.08
RNU4-28P-201ENST00000364739 CALM3P0DP25 149 aa2.05□□□□□ -2.08
RNU4-28P-201ENST00000364739 ZNF138P52744 262 aa2.05□□□□□ -2.08
RNU4-28P-201ENST00000364739 KRTAP12-4P60329 112 aa2.05□□□□□ -2.08
RNU4-28P-201ENST00000364739 MEF2BQ02080 365 aaPredicted RBP2.05□□□□□ -2.08
RNU4-28P-201ENST00000364739 PPIL2Q13356 520 aa2.05□□□□□ -2.08
RNU4-28P-201ENST00000364739 ARHGAP19Q14CB8 494 aa2.05□□□□□ -2.08
RNU4-28P-201ENST00000364739 PON2Q15165 354 aa2.05□□□□□ -2.08
RNU4-28P-201ENST00000364739 PTPN20Q4JDL3 420 aa2.05□□□□□ -2.08
RNU4-28P-201ENST00000364739 Q6ZPB1 254 aaPredicted RBP2.05□□□□□ -2.08
RNU4-28P-201ENST00000364739 BHLHA15Q7RTS1 189 aaPredicted RBP2.05□□□□□ -2.08
RNU4-28P-201ENST00000364739 COQ8AQ8NI60 647 aa2.05□□□□□ -2.08
RNU4-28P-201ENST00000364739 LKAAEAR1Q8TD35 194 aa2.05□□□□□ -2.08
RNU4-28P-201ENST00000364739 C15orf40Q8WUR7 153 aa2.05□□□□□ -2.08
RNU4-28P-201ENST00000364739 TMEM43Q9BTV4 400 aa2.05□□□□□ -2.08
RNU4-28P-201ENST00000364739 SHPKQ9UHJ6 478 aa2.05□□□□□ -2.08
RNU4-28P-201ENST00000364739 NLRC5Q86WI3 1866 aa2.05□□□□□ -2.08
RNU4-28P-201ENST00000364739 TRAV39A0A0B4J263 110 aa2.04□□□□□ -2.08
RNU4-28P-201ENST00000364739 LGALS9O00182 355 aa2.04□□□□□ -2.08
RNU4-28P-201ENST00000364739 RAB3DO95716 219 aa2.04□□□□□ -2.08
RNU4-28P-201ENST00000364739 APCSP02743 223 aa2.04□□□□□ -2.08
RNU4-28P-201ENST00000364739 CT62P0C5K7 136 aa2.04□□□□□ -2.08
RNU4-28P-201ENST00000364739 YAP1P46937 504 aaKnown RBP2.04□□□□□ -2.08
RNU4-28P-201ENST00000364739 FBXW4P57775 412 aa2.04□□□□□ -2.08
RNU4-28P-201ENST00000364739 ZNF616Q08AN1 781 aa2.04□□□□□ -2.08
RNU4-28P-201ENST00000364739 TCP10Q12799 353 aa2.04□□□□□ -2.08
RNU4-28P-201ENST00000364739 OR2A2Q6IF42 318 aa2.04□□□□□ -2.08
RNU4-28P-201ENST00000364739 ZFP1Q6P2D0 407 aa2.04□□□□□ -2.08
RNU4-28P-201ENST00000364739 MIR7-3HGQ8N6C7 128 aa2.04□□□□□ -2.08
RNU4-28P-201ENST00000364739 OR4K5Q8NGD3 323 aa2.04□□□□□ -2.08
RNU4-28P-201ENST00000364739 OR1L4Q8NGR5 311 aa2.04□□□□□ -2.08
RNU4-28P-201ENST00000364739 CIRBP-AS1Q8TBR5 109 aa2.04□□□□□ -2.08
RNU4-28P-201ENST00000364739 SYAP1Q96A49 352 aaPredicted RBP2.04□□□□□ -2.08
RNU4-28P-201ENST00000364739 C12orf42Q96LP6 360 aa2.04□□□□□ -2.08
RNU4-28P-201ENST00000364739 CAMK2N2Q96S95 79 aa2.04□□□□□ -2.08
RNU4-28P-201ENST00000364739 KCTD14Q9BQ13 255 aaPredicted RBP2.04□□□□□ -2.08
RNU4-28P-201ENST00000364739 SAV1Q9H4B6 383 aaPredicted RBP2.04□□□□□ -2.08
RNU4-28P-201ENST00000364739 AZI2Q9H6S1 392 aa2.04□□□□□ -2.08
RNU4-28P-201ENST00000364739 FBXO6Q9NRD1 293 aaPredicted RBP2.04□□□□□ -2.08
RNU4-28P-201ENST00000364739 UVRAGQ9P2Y5 699 aa2.04□□□□□ -2.08
RNU4-28P-201ENST00000364739 CTSFQ9UBX1 484 aa2.04□□□□□ -2.08
RNU4-28P-201ENST00000364739 N6AMT1Q9Y5N5 214 aa2.04□□□□□ -2.08
RNU4-28P-201ENST00000364739 PCNX2A6NKB5 2137 aa2.03□□□□□ -2.08
RNU4-28P-201ENST00000364739 DHX57Q6P158 1386 aaKnown RBP2.03□□□□□ -2.08
RNU4-28P-201ENST00000364739 GOLGA8SH3BPF8 625 aa2.03□□□□□ -2.08
RNU4-28P-201ENST00000364739 TIMM8AO60220 97 aaPredicted RBP2.03□□□□□ -2.08
RNU4-28P-201ENST00000364739 AIFM1O95831 613 aa2.03□□□□□ -2.08
RNU4-28P-201ENST00000364739 PIGHQ14442 188 aaPredicted RBP2.03□□□□□ -2.08
RNU4-28P-201ENST00000364739 ZNF77Q15935 545 aa2.03□□□□□ -2.08
RNU4-28P-201ENST00000364739 EXOC3L2Q2M3D2 409 aa2.03□□□□□ -2.08
RNU4-28P-201ENST00000364739 ASCL5Q7RTU5 278 aa2.03□□□□□ -2.08
RNU4-28P-201ENST00000364739 PEX26Q7Z412 305 aa2.03□□□□□ -2.08
RNU4-28P-201ENST00000364739 CALHM1Q8IU99 346 aa2.03□□□□□ -2.08
RNU4-28P-201ENST00000364739 GATSQ8NAP1 163 aa2.03□□□□□ -2.08
RNU4-28P-201ENST00000364739 FLYWCH2Q96CP2 140 aaKnown RBP2.03□□□□□ -2.08
RNU4-28P-201ENST00000364739 SH3GL1Q99961 368 aa2.03□□□□□ -2.08
RNU4-28P-201ENST00000364739 ANKRD19PQ9H560 264 aa2.03□□□□□ -2.08
RNU4-28P-201ENST00000364739 PIGLQ9Y2B2 252 aa2.03□□□□□ -2.08
RNU4-28P-201ENST00000364739 SIGLEC9Q9Y336 463 aa2.03□□□□□ -2.08
RNU4-28P-201ENST00000364739 IKBKGQ9Y6K9 419 aa2.03□□□□□ -2.08
RNU4-28P-201ENST00000364739 A0A0U1RQV1 116 aa2.02□□□□□ -2.09
RNU4-28P-201ENST00000364739 GOSR2O14653 212 aa2.02□□□□□ -2.09
RNU4-28P-201ENST00000364739 PPP1R2P9O14990 202 aa2.02□□□□□ -2.09
RNU4-28P-201ENST00000364739 ZNF208O43345 1280 aa2.02□□□□□ -2.09
RNU4-28P-201ENST00000364739 NOL3O60936 208 aaKnown RBP2.02□□□□□ -2.09
RNU4-28P-201ENST00000364739 CBR3O75828 277 aa2.02□□□□□ -2.09
RNU4-28P-201ENST00000364739 C2P06681 752 aa2.02□□□□□ -2.09
RNU4-28P-201ENST00000364739 C1GALT1C1LP0DN25 315 aa2.02□□□□□ -2.09
RNU4-28P-201ENST00000364739 VHLP40337 213 aa2.02□□□□□ -2.09
RNU4-28P-201ENST00000364739 AQP2P41181 271 aa2.02□□□□□ -2.09
RNU4-28P-201ENST00000364739 SPIN3Q5JUX0 258 aa2.02□□□□□ -2.09
RNU4-28P-201ENST00000364739 ANKRD22Q5VYY1 191 aa2.02□□□□□ -2.09
RNU4-28P-201ENST00000364739 FBXW12Q6X9E4 464 aa2.02□□□□□ -2.09
RNU4-28P-201ENST00000364739 PRSS58Q8IYP2 241 aa2.02□□□□□ -2.09
RNU4-28P-201ENST00000364739 LRRC52Q8N7C0 313 aa2.02□□□□□ -2.09
RNU4-28P-201ENST00000364739 FAM83FQ8NEG4 500 aaPredicted RBP2.02□□□□□ -2.09
RNU4-28P-201ENST00000364739 SDR9C7Q8NEX9 313 aa2.02□□□□□ -2.09
RNU4-28P-201ENST00000364739 OR1L6Q8NGR2 347 aa2.02□□□□□ -2.09
RNU4-28P-201ENST00000364739 LINC01560Q8TB33 94 aa2.02□□□□□ -2.09
RNU4-28P-201ENST00000364739 TCEANC2Q96MN5 208 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms