RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 WDFY1Q8IWB7 410 aa9.56□□□□□ -0.88
SMC3-201ENST00000361804 RPS4Y2Q8TD47 263 aa9.56□□□□□ -0.88
SMC3-201ENST00000361804 ST8SIA2Q92186 375 aa9.56□□□□□ -0.88
SMC3-201ENST00000361804 NPAS1Q99742 590 aa9.56□□□□□ -0.88
SMC3-201ENST00000361804 MTFP1Q9UDX5 166 aa9.56□□□□□ -0.88
SMC3-201ENST00000361804 ZNF749O43361 778 aa9.55□□□□□ -0.88
SMC3-201ENST00000361804 SDHAP31040 664 aa9.55□□□□□ -0.88
SMC3-201ENST00000361804 HHEXQ03014 270 aa9.55□□□□□ -0.88
SMC3-201ENST00000361804 SPOCK1Q08629 439 aa9.55□□□□□ -0.88
SMC3-201ENST00000361804 C16orf47Q6ZP98 133 aaPredicted RBP9.55□□□□□ -0.88
SMC3-201ENST00000361804 ATG4DQ86TL0 474 aaPredicted RBP9.55□□□□□ -0.88
SMC3-201ENST00000361804 CD163Q86VB7 1156 aa9.55□□□□□ -0.88
SMC3-201ENST00000361804 ZNF454Q8N9F8 522 aa9.55□□□□□ -0.88
SMC3-201ENST00000361804 OR1J2Q8NGS2 313 aa9.55□□□□□ -0.88
SMC3-201ENST00000361804 TSLPQ969D9 159 aa9.55□□□□□ -0.88
SMC3-201ENST00000361804 PNPLA2Q96AD5 504 aa9.55□□□□□ -0.88
SMC3-201ENST00000361804 TOE1Q96GM8 510 aaKnown RBP9.55□□□□□ -0.88
SMC3-201ENST00000361804 GPN1Q9HCN4 374 aaPredicted RBP9.55□□□□□ -0.88
SMC3-201ENST00000361804 PCOLCE2Q9UKZ9 415 aa9.55□□□□□ -0.88
SMC3-201ENST00000361804 TRBV5-5A0A0J9YX44 114 aa9.55□□□□□ -0.88
SMC3-201ENST00000361804 H0YIG0 161 aa9.55□□□□□ -0.88
SMC3-201ENST00000361804 XRCC3O43542 346 aa9.55□□□□□ -0.88
SMC3-201ENST00000361804 IGHV4-34P06331 123 aa9.55□□□□□ -0.88
SMC3-201ENST00000361804 ALOX5APP20292 161 aa9.55□□□□□ -0.88
SMC3-201ENST00000361804 IL11P20809 199 aa9.55□□□□□ -0.88
SMC3-201ENST00000361804 HNRNPA2B1P22626 353 aaKnown RBP9.55□□□□□ -0.88
SMC3-201ENST00000361804 OR1D4P47884 311 aa9.55□□□□□ -0.88
SMC3-201ENST00000361804 RBMS2Q15434 407 aaKnown RBP9.55□□□□□ -0.88
SMC3-201ENST00000361804 TSSK4Q6SA08 328 aa9.55□□□□□ -0.88
SMC3-201ENST00000361804 ZNF227Q86WZ6 799 aa9.55□□□□□ -0.88
SMC3-201ENST00000361804 MFFQ9GZY8 342 aa9.55□□□□□ -0.88
SMC3-201ENST00000361804 AKAP7Q9P0M2 348 aaPredicted RBP9.55□□□□□ -0.88
SMC3-201ENST00000361804 CABIN1Q9Y6J0 2220 aa9.55□□□□□ -0.88
SMC3-201ENST00000361804 TRAV14DV4A0A0A6YYC5 116 aa9.55□□□□□ -0.88
SMC3-201ENST00000361804 PCP4L1A6NKN8 68 aa9.55□□□□□ -0.88
SMC3-201ENST00000361804 KCNJ13O60928 360 aa9.55□□□□□ -0.88
SMC3-201ENST00000361804 RAB40ALP0C0E4 278 aa9.55□□□□□ -0.88
SMC3-201ENST00000361804 CPN1P15169 458 aa9.55□□□□□ -0.88
SMC3-201ENST00000361804 ZP3P21754 424 aa9.55□□□□□ -0.88
SMC3-201ENST00000361804 OR52H1Q8NGJ2 320 aa9.55□□□□□ -0.88
SMC3-201ENST00000361804 RAB40AQ8WXH6 277 aa9.55□□□□□ -0.88
SMC3-201ENST00000361804 FAM46BQ96A09 425 aa9.55□□□□□ -0.88
SMC3-201ENST00000361804 FAM3DQ96BQ1 224 aa9.55□□□□□ -0.88
SMC3-201ENST00000361804 OR11A1Q9GZK7 315 aa9.55□□□□□ -0.88
SMC3-201ENST00000361804 PPA2Q9H2U2 334 aa9.55□□□□□ -0.88
SMC3-201ENST00000361804 TAS2R4Q9NYW5 299 aa9.55□□□□□ -0.88
SMC3-201ENST00000361804 FBXL21Q9UKT6 434 aa9.55□□□□□ -0.88
SMC3-201ENST00000361804 UNC13CQ8NB66 2214 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 UBE2QL1A1L167 161 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 NAP1L6A6NFF2 107 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 CLPSP04118 112 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 CALCBP10092 127 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 DLX5P56178 289 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 IL10RAQ13651 578 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 KLHL26Q53HC5 615 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 RNF144BQ7Z419 303 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 GPR119Q8TDV5 335 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 RADILQ96JH8 1075 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 C17orf105B2RV13 164 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 HCRTR2O43614 444 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 ICOSLGO75144 302 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 HLA-DOBP13765 273 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 GFERP55789 205 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 SKP2Q13309 424 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 IKZF1Q13422 519 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 SLC35D3Q5M8T2 416 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 LY6G6FQ5SQ64 297 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 GLYATL3Q5SZD4 288 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 LINC00346Q8IVM7 164 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 GVQW1Q8N7I0 195 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 ACBD4Q8NC06 268 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 RLN3Q8WXF3 142 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 ADAT1Q9BUB4 502 aaKnown RBP9.54□□□□□ -0.88
SMC3-201ENST00000361804 KIF25Q9UIL4 384 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 HIF3AQ9Y2N7 669 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 MRPS18BQ9Y676 258 aaKnown RBP9.54□□□□□ -0.88
SMC3-201ENST00000361804 TMEM235A6NFC5 223 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 FAM74A7A6NL05 159 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 EIF1AYO14602 144 aaKnown RBP9.54□□□□□ -0.88
SMC3-201ENST00000361804 SLC16A7O60669 478 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 TACSTD2P09758 323 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 ASAH2BP0C7U1 165 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 PRPS1P60891 318 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 FAM74A3Q4VXF1 159 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 LRFN4Q6PJG9 635 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 ZNF615Q8N8J6 731 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 C4orf45Q96LM5 186 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 SHARPINQ9H0F6 387 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 MRTO4Q9UKD2 239 aaKnown RBP9.54□□□□□ -0.88
SMC3-201ENST00000361804 CDV3Q9UKY7 258 aaKnown RBP9.54□□□□□ -0.88
SMC3-201ENST00000361804 TCRBV21S2A2A0A5A6 115 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 EFCAB7A8K855 629 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 FAM25EA8MYX2 175 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 PRAMEF2O60811 474 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 RNH1P13489 461 aaKnown RBP9.54□□□□□ -0.88
SMC3-201ENST00000361804 UBE2IP63279 158 aaKnown RBP9.54□□□□□ -0.88
SMC3-201ENST00000361804 DHODHQ02127 395 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 CCINQ13939 588 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 GK2Q14410 553 aaPredicted RBP9.54□□□□□ -0.88
SMC3-201ENST00000361804 SLC6A19Q695T7 634 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms