RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 ZNF250P15622 560 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 SELENOPP49908 381 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 HTD2P86397 168 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 C2orf76Q3KRA6 126 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 RNLSQ5VYX0 342 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 C11orf87Q6NUJ2 197 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 MS4A4AQ96JQ5 239 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 DEFB126Q9BYW3 111 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 TIMM8BQ9Y5J9 83 aaPredicted RBP12.79□□□□□ -0.36
SMC5-201ENST00000361138 ATAD5Q96QE3 1844 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 ZNF728P0DKX0 622 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 RAC2P15153 192 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 KIAA0907Q7Z7F0 614 aaPredicted RBP12.79□□□□□ -0.36
SMC5-201ENST00000361138 OR11H7Q8NGC8 314 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 GPR137Q96N19 417 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 URGCP-MRPS24S4R325 110 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 ANKRD61A6NGH8 418 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 CTNSO60931 367 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 IGHG1P01857 330 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 RD3LP0DJH9 198 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 BLVRBP30043 206 aaPredicted RBP12.78□□□□□ -0.36
SMC5-201ENST00000361138 NTSR1P30989 418 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 CAMK2BQ13554 666 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 C1orf87Q8N0U7 546 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 PPP1R1CQ8WVI7 109 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 SAMD10Q9BYL1 202 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 A0A087WZY1 265 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 PLA2G10O15496 165 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 JTBO76095 146 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 B4GALNT1Q00973 533 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 CLINT1Q14677 625 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 AGERQ15109 404 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 PHF19Q5T6S3 580 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 Q6ZRG5 221 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 BHLHA9Q7RTU4 235 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 ZNF595Q8IYB9 648 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 SGCZQ96LD1 299 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 ALKBH4Q9NXW9 302 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 HNRNPA2B1P22626 353 aaKnown RBP12.78□□□□□ -0.36
SMC5-201ENST00000361138 EPHA4P54764 986 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 OR2B8PP59922 312 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 RAB1AP62820 205 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 PLGLB1Q02325 96 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 PDZD11Q5EBL8 140 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 FCRL6Q6DN72 434 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 IL34Q6ZMJ4 242 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 ZSCAN4Q8NAM6 433 aaPredicted RBP12.78□□□□□ -0.36
SMC5-201ENST00000361138 HSD17B11Q8NBQ5 300 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 ORAI1Q96D31 301 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 LIN37Q96GY3 246 aaPredicted RBP12.78□□□□□ -0.36
SMC5-201ENST00000361138 SLC6A17Q9H1V8 727 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 FBRSQ9HAH7 460 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 SPHK1Q9NYA1 384 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 CCL26Q9Y258 94 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 K7ESM1 405 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 CBX7O95931 251 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 ATF1P18846 271 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 SDHBP21912 280 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 YBX1P67809 324 aaKnown RBP12.78□□□□□ -0.36
SMC5-201ENST00000361138 NXF5Q9H1B4 397 aaKnown RBP12.78□□□□□ -0.36
SMC5-201ENST00000361138 KLHL13Q9P2N7 655 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 SFTA3P0C7M3 94 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 ITGB8P26012 769 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 RPS18P62269 152 aaKnown RBP12.78□□□□□ -0.36
SMC5-201ENST00000361138 MELKQ14680 651 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 TRMT12Q53H54 448 aaKnown RBP12.78□□□□□ -0.36
SMC5-201ENST00000361138 ZNF705AQ6ZN79 300 aaPredicted RBP12.78□□□□□ -0.36
SMC5-201ENST00000361138 LINC00346Q8IVM7 164 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 WBP2Q969T9 261 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 RBMXL1Q96E39 390 aaKnown RBP12.78□□□□□ -0.36
SMC5-201ENST00000361138 SFXN1Q9H9B4 322 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 DUSP22Q9NRW4 184 aa12.78□□□□□ -0.36
SMC5-201ENST00000361138 OR6C76A6NM76 312 aa12.77□□□□□ -0.36
SMC5-201ENST00000361138 PLPP2O43688 288 aa12.77□□□□□ -0.36
SMC5-201ENST00000361138 FCMRO60667 390 aa12.77□□□□□ -0.36
SMC5-201ENST00000361138 LIMS3P0CW19 117 aa12.77□□□□□ -0.36
SMC5-201ENST00000361138 LIMS4P0CW20 117 aa12.77□□□□□ -0.36
SMC5-201ENST00000361138 FASLGP48023 281 aa12.77□□□□□ -0.36
SMC5-201ENST00000361138 EGR3Q06889 387 aa12.77□□□□□ -0.36
SMC5-201ENST00000361138 GLIPR1L1Q6UWM5 242 aa12.77□□□□□ -0.36
SMC5-201ENST00000361138 CD300LDQ6UXZ3 194 aa12.77□□□□□ -0.36
SMC5-201ENST00000361138 TMEM182Q6ZP80 229 aaPredicted RBP12.77□□□□□ -0.36
SMC5-201ENST00000361138 TMEM229BQ8NBD8 167 aa12.77□□□□□ -0.36
SMC5-201ENST00000361138 OR9K2Q8NGE7 335 aa12.77□□□□□ -0.36
SMC5-201ENST00000361138 CHAC2Q8WUX2 184 aa12.77□□□□□ -0.36
SMC5-201ENST00000361138 DIO2Q92813 273 aa12.77□□□□□ -0.36
SMC5-201ENST00000361138 WSB2Q9NYS7 404 aaPredicted RBP12.77□□□□□ -0.36
SMC5-201ENST00000361138 KCNIP1Q9NZI2 227 aa12.77□□□□□ -0.36
SMC5-201ENST00000361138 SERPINA7P05543 415 aa12.77□□□□□ -0.36
SMC5-201ENST00000361138 MRPS34P82930 218 aaKnown RBP12.77□□□□□ -0.36
SMC5-201ENST00000361138 TMEM52BQ4KMG9 183 aa12.77□□□□□ -0.36
SMC5-201ENST00000361138 ZNF626Q68DY1 528 aa12.77□□□□□ -0.36
SMC5-201ENST00000361138 HSD17B13Q7Z5P4 300 aaPredicted RBP12.77□□□□□ -0.36
SMC5-201ENST00000361138 OR1J2Q8NGS2 313 aa12.77□□□□□ -0.36
SMC5-201ENST00000361138 H7C1Q1 480 aa12.77□□□□□ -0.37
SMC5-201ENST00000361138 UTS2O95399 124 aa12.77□□□□□ -0.37
SMC5-201ENST00000361138 CTSLP07711 333 aa12.77□□□□□ -0.37
SMC5-201ENST00000361138 SLC35E2P0CK97 266 aa12.77□□□□□ -0.37
SMC5-201ENST00000361138 HMGA1P17096 107 aaKnown RBP12.77□□□□□ -0.37
SMC5-201ENST00000361138 CSF2RBP32927 897 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms