RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 LRCH1Q9Y2L9 728 aa13.33□□□□□ -0.28
IFT20-202ENST00000357896 SOX21Q9Y651 276 aaPredicted RBP13.33□□□□□ -0.28
IFT20-202ENST00000357896 C5orf58C9J3I9 102 aa13.32□□□□□ -0.28
IFT20-202ENST00000357896 C11orf98E9PRG8 122 aa13.32□□□□□ -0.28
IFT20-202ENST00000357896 F5H0A9 414 aaPredicted RBP13.32□□□□□ -0.28
IFT20-202ENST00000357896 H3BSA7 217 aa13.32□□□□□ -0.28
IFT20-202ENST00000357896 TGDSO95455 350 aa13.32□□□□□ -0.28
IFT20-202ENST00000357896 ETS2P15036 469 aa13.32□□□□□ -0.28
IFT20-202ENST00000357896 TNFRSF1AP19438 455 aa13.32□□□□□ -0.28
IFT20-202ENST00000357896 TNFSF4P23510 183 aa13.32□□□□□ -0.28
IFT20-202ENST00000357896 IL12AP29459 219 aa13.32□□□□□ -0.28
IFT20-202ENST00000357896 MPV17P39210 176 aa13.32□□□□□ -0.28
IFT20-202ENST00000357896 ZNF84P51523 738 aa13.32□□□□□ -0.28
IFT20-202ENST00000357896 BPIFB3P59826 476 aa13.32□□□□□ -0.28
IFT20-202ENST00000357896 ABCE1P61221 599 aaKnown RBP13.32□□□□□ -0.28
IFT20-202ENST00000357896 RPL15P61313 204 aaKnown RBP13.32□□□□□ -0.28
IFT20-202ENST00000357896 ZER1Q7Z7L7 766 aa13.32□□□□□ -0.28
IFT20-202ENST00000357896 ZNF101Q8IZC7 436 aa13.32□□□□□ -0.28
IFT20-202ENST00000357896 MUC20Q8N307 709 aaPredicted RBP13.32□□□□□ -0.28
IFT20-202ENST00000357896 TMEM86BQ8N661 226 aa13.32□□□□□ -0.28
IFT20-202ENST00000357896 ZNF283Q8N7M2 679 aa13.32□□□□□ -0.28
IFT20-202ENST00000357896 SLC25A40Q8TBP6 338 aa13.32□□□□□ -0.28
IFT20-202ENST00000357896 THOC1Q96FV9 657 aaKnown RBP13.32□□□□□ -0.28
IFT20-202ENST00000357896 TMEM43Q9BTV4 400 aa13.32□□□□□ -0.28
IFT20-202ENST00000357896 NUF2Q9BZD4 464 aa13.32□□□□□ -0.28
IFT20-202ENST00000357896 OR2J1Q9GZK6 312 aa13.32□□□□□ -0.28
IFT20-202ENST00000357896 AIG1Q9NVV5 245 aa13.32□□□□□ -0.28
IFT20-202ENST00000357896 RNF114Q9Y508 228 aa13.32□□□□□ -0.28
IFT20-202ENST00000357896 TRAV40A0A0B4J280 105 aa13.31□□□□□ -0.28
IFT20-202ENST00000357896 A0A0B4J2E0 115 aa13.31□□□□□ -0.28
IFT20-202ENST00000357896 MDFIC2A0A1B0GVS7 189 aa13.31□□□□□ -0.28
IFT20-202ENST00000357896 A0A1B0GX12 115 aa13.31□□□□□ -0.28
IFT20-202ENST00000357896 LRRN3E7EW58 273 aa13.31□□□□□ -0.28
IFT20-202ENST00000357896 ERLIN1O75477 346 aa13.31□□□□□ -0.28
IFT20-202ENST00000357896 SERPINE1P05121 402 aa13.31□□□□□ -0.28
IFT20-202ENST00000357896 MMP7P09237 267 aaPredicted RBP13.31□□□□□ -0.28
IFT20-202ENST00000357896 ALDOCP09972 364 aaKnown RBP13.31□□□□□ -0.28
IFT20-202ENST00000357896 MDH2P40926 338 aaKnown RBP13.31□□□□□ -0.28
IFT20-202ENST00000357896 RELBQ01201 579 aa13.31□□□□□ -0.28
IFT20-202ENST00000357896 ZMYND11Q15326 602 aa13.31□□□□□ -0.28
IFT20-202ENST00000357896 DEFB112Q30KQ8 113 aa13.31□□□□□ -0.28
IFT20-202ENST00000357896 PABPC1L2AQ5JQF8 200 aa13.31□□□□□ -0.28
IFT20-202ENST00000357896 SWT1Q5T5J6 900 aaKnown RBP13.31□□□□□ -0.28
IFT20-202ENST00000357896 LRRC18Q8N456 261 aa13.31□□□□□ -0.28
IFT20-202ENST00000357896 EIF1ADQ8N9N8 165 aaKnown RBP13.31□□□□□ -0.28
IFT20-202ENST00000357896 OR10S1Q8NGN2 331 aa13.31□□□□□ -0.28
IFT20-202ENST00000357896 SAMD8Q96LT4 415 aa13.31□□□□□ -0.28
IFT20-202ENST00000357896 ARHGDIGQ99819 225 aa13.31□□□□□ -0.28
IFT20-202ENST00000357896 SPATA5L1Q9BVQ7 753 aa13.31□□□□□ -0.28
IFT20-202ENST00000357896 RMND5AQ9H871 391 aa13.31□□□□□ -0.28
IFT20-202ENST00000357896 MEAF6Q9HAF1 191 aa13.31□□□□□ -0.28
IFT20-202ENST00000357896 MSL2Q9HCI7 577 aa13.31□□□□□ -0.28
IFT20-202ENST00000357896 TNFRSF19Q9NS68 423 aa13.31□□□□□ -0.28
IFT20-202ENST00000357896 DCAF16Q9NXF7 216 aa13.31□□□□□ -0.28
IFT20-202ENST00000357896 TRIM33Q9UPN9 1127 aa13.31□□□□□ -0.28
IFT20-202ENST00000357896 C5orf49A4QMS7 147 aa13.3□□□□□ -0.28
IFT20-202ENST00000357896 RNF13O43567 381 aa13.3□□□□□ -0.28
IFT20-202ENST00000357896 IGHG1P01857 330 aa13.3□□□□□ -0.28
IFT20-202ENST00000357896 PGA4P0DJD7 388 aa13.3□□□□□ -0.28
IFT20-202ENST00000357896 PGA3P0DJD8 388 aa13.3□□□□□ -0.28
IFT20-202ENST00000357896 WNT5AP41221 380 aa13.3□□□□□ -0.28
IFT20-202ENST00000357896 GDI2P50395 445 aaKnown RBP13.3□□□□□ -0.28
IFT20-202ENST00000357896 PAX2Q02962 417 aa13.3□□□□□ -0.28
IFT20-202ENST00000357896 OR1Q1Q15612 314 aa13.3□□□□□ -0.28
IFT20-202ENST00000357896 SPRNQ5BIV9 151 aa13.3□□□□□ -0.28
IFT20-202ENST00000357896 MTX3Q5HYI7 312 aa13.3□□□□□ -0.28
IFT20-202ENST00000357896 CEP85LQ5SZL2 805 aa13.3□□□□□ -0.28
IFT20-202ENST00000357896 Q6YL49 198 aa13.3□□□□□ -0.28
IFT20-202ENST00000357896 ZNF620Q6ZNG0 422 aa13.3□□□□□ -0.28
IFT20-202ENST00000357896 RAB40AQ8WXH6 277 aa13.3□□□□□ -0.28
IFT20-202ENST00000357896 MAL2Q969L2 176 aa13.3□□□□□ -0.28
IFT20-202ENST00000357896 MCHR2Q969V1 340 aa13.3□□□□□ -0.28
IFT20-202ENST00000357896 FAM71F1Q96KD3 344 aaPredicted RBP13.3□□□□□ -0.28
IFT20-202ENST00000357896 POM121L2Q96KW2 1035 aa13.3□□□□□ -0.28
IFT20-202ENST00000357896 SSBP3Q9BWW4 388 aaPredicted RBP13.3□□□□□ -0.28
IFT20-202ENST00000357896 CHIAQ9BZP6 476 aa13.3□□□□□ -0.28
IFT20-202ENST00000357896 RAD21L1Q9H4I0 556 aa13.3□□□□□ -0.28
IFT20-202ENST00000357896 MARCH7Q9H992 704 aa13.3□□□□□ -0.28
IFT20-202ENST00000357896 TCF7L1Q9HCS4 588 aa13.3□□□□□ -0.28
IFT20-202ENST00000357896 CCNB1IP1Q9NPC3 277 aa13.3□□□□□ -0.28
IFT20-202ENST00000357896 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.3□□□□□ -0.28
IFT20-202ENST00000357896 POMT1Q9Y6A1 747 aa13.3□□□□□ -0.28
IFT20-202ENST00000357896 IGHV2-70DA0A0C4DH43 119 aa13.29□□□□□ -0.28
IFT20-202ENST00000357896 CLPXO76031 633 aa13.29□□□□□ -0.28
IFT20-202ENST00000357896 WNT2P09544 360 aa13.29□□□□□ -0.28
IFT20-202ENST00000357896 ETV4P43268 484 aa13.29□□□□□ -0.28
IFT20-202ENST00000357896 CLRN1P58418 232 aa13.29□□□□□ -0.28
IFT20-202ENST00000357896 KRTAP10-3P60369 221 aa13.29□□□□□ -0.28
IFT20-202ENST00000357896 PPP1CBP62140 327 aa13.29□□□□□ -0.28
IFT20-202ENST00000357896 FADDQ13158 208 aa13.29□□□□□ -0.28
IFT20-202ENST00000357896 CDK5R2Q13319 367 aa13.29□□□□□ -0.28
IFT20-202ENST00000357896 RGNQ15493 299 aa13.29□□□□□ -0.28
IFT20-202ENST00000357896 HIST3H3Q16695 136 aa13.29□□□□□ -0.28
IFT20-202ENST00000357896 TMEM255AQ5JRV8 349 aa13.29□□□□□ -0.28
IFT20-202ENST00000357896 DHRS4L2Q6PKH6 230 aa13.29□□□□□ -0.28
IFT20-202ENST00000357896 KRT73Q86Y46 540 aa13.29□□□□□ -0.28
IFT20-202ENST00000357896 BHLHE22Q8NFJ8 381 aaPredicted RBP13.29□□□□□ -0.28
IFT20-202ENST00000357896 ABHD4Q8TB40 342 aa13.29□□□□□ -0.28
IFT20-202ENST00000357896 ITCHQ96J02 903 aa13.29□□□□□ -0.28
IFT20-202ENST00000357896 PLEKHA8Q96JA3 519 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms