RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 PPP1CAP62136 330 aa16■□□□□ 0.15
RTN4-204ENST00000357732 NNATQ16517 81 aa16■□□□□ 0.15
RTN4-204ENST00000357732 MED25Q71SY5 747 aa16■□□□□ 0.15
RTN4-204ENST00000357732 STPG2Q8N412 459 aa16■□□□□ 0.15
RTN4-204ENST00000357732 PXT1Q8NFP0 134 aa16■□□□□ 0.15
RTN4-204ENST00000357732 PHOSPHO1Q8TCT1 267 aa16■□□□□ 0.15
RTN4-204ENST00000357732 PTX4Q96A99 478 aa16■□□□□ 0.15
RTN4-204ENST00000357732 MTIF3Q9H2K0 278 aaKnown RBP16■□□□□ 0.15
RTN4-204ENST00000357732 GPN3Q9UHW5 284 aaPredicted RBP16■□□□□ 0.15
RTN4-204ENST00000357732 ZNF346Q9UL40 294 aaKnown RBP16■□□□□ 0.15
RTN4-204ENST00000357732 HEATR5AQ86XA9 2040 aa16■□□□□ 0.15
RTN4-204ENST00000357732 C4orf47A7E2U8 309 aa16■□□□□ 0.15
RTN4-204ENST00000357732 CDC123O75794 336 aaPredicted RBP16■□□□□ 0.15
RTN4-204ENST00000357732 OR2F2O95006 317 aa16■□□□□ 0.15
RTN4-204ENST00000357732 CTSBP07858 339 aa16■□□□□ 0.15
RTN4-204ENST00000357732 TPMTP51580 245 aa16■□□□□ 0.15
RTN4-204ENST00000357732 SORDQ00796 357 aa16■□□□□ 0.15
RTN4-204ENST00000357732 OR2F1Q13607 317 aa16■□□□□ 0.15
RTN4-204ENST00000357732 CD226Q15762 336 aa16■□□□□ 0.15
RTN4-204ENST00000357732 SLC18B1Q6NT16 456 aa16■□□□□ 0.15
RTN4-204ENST00000357732 KCTD18Q6PI47 426 aaPredicted RBP16■□□□□ 0.15
RTN4-204ENST00000357732 CDCA3Q99618 268 aaPredicted RBP16■□□□□ 0.15
RTN4-204ENST00000357732 EDEM2Q9BV94 578 aa16■□□□□ 0.15
RTN4-204ENST00000357732 LAT2Q9GZY6 243 aa16■□□□□ 0.15
RTN4-204ENST00000357732 POFUT1Q9H488 388 aa16■□□□□ 0.15
RTN4-204ENST00000357732 RASL12Q9NYN1 266 aa16■□□□□ 0.15
RTN4-204ENST00000357732 A0A1B0GTH9 108 aa15.99■□□□□ 0.15
RTN4-204ENST00000357732 A0A1B0GTI1 187 aa15.99■□□□□ 0.15
RTN4-204ENST00000357732 XKRYO14609 159 aa15.99■□□□□ 0.15
RTN4-204ENST00000357732 NUDT21O43809 227 aaKnown RBP15.99■□□□□ 0.15
RTN4-204ENST00000357732 DOK2O60496 412 aa15.99■□□□□ 0.15
RTN4-204ENST00000357732 RAB3DO95716 219 aa15.99■□□□□ 0.15
RTN4-204ENST00000357732 CLPSP04118 112 aa15.99■□□□□ 0.15
RTN4-204ENST00000357732 SLC25A4P12235 298 aa15.99■□□□□ 0.15
RTN4-204ENST00000357732 OC90Q02509 493 aaPredicted RBP15.99■□□□□ 0.15
RTN4-204ENST00000357732 GUCA2AQ02747 115 aa15.99■□□□□ 0.15
RTN4-204ENST00000357732 ZMYND11Q15326 602 aa15.99■□□□□ 0.15
RTN4-204ENST00000357732 ARHGAP40Q5TG30 622 aa15.99■□□□□ 0.15
RTN4-204ENST00000357732 ESX1Q8N693 406 aa15.99■□□□□ 0.15
RTN4-204ENST00000357732 ZSCAN1Q8NBB4 408 aa15.99■□□□□ 0.15
RTN4-204ENST00000357732 ARPC5LQ9BPX5 153 aa15.99■□□□□ 0.15
RTN4-204ENST00000357732 TMEM106CQ9BVX2 250 aa15.99■□□□□ 0.15
RTN4-204ENST00000357732 ATG5Q9H1Y0 275 aa15.99■□□□□ 0.15
RTN4-204ENST00000357732 S1PR5Q9H228 398 aa15.99■□□□□ 0.15
RTN4-204ENST00000357732 SYT4Q9H2B2 425 aa15.99■□□□□ 0.15
RTN4-204ENST00000357732 ELOVL3Q9HB03 270 aa15.99■□□□□ 0.15
RTN4-204ENST00000357732 POM121CA8CG34 1229 aa15.99■□□□□ 0.15
RTN4-204ENST00000357732 MT-ATP6P00846 226 aa15.99■□□□□ 0.15
RTN4-204ENST00000357732 CD74P04233 296 aa15.99■□□□□ 0.15
RTN4-204ENST00000357732 MST1P26927 711 aa15.99■□□□□ 0.15
RTN4-204ENST00000357732 PPICP45877 212 aa15.99■□□□□ 0.15
RTN4-204ENST00000357732 CCR4P51679 360 aa15.99■□□□□ 0.15
RTN4-204ENST00000357732 Q6ZSR6 202 aa15.99■□□□□ 0.15
RTN4-204ENST00000357732 ZNF546Q86UE3 836 aa15.99■□□□□ 0.15
RTN4-204ENST00000357732 ZNF761Q86XN6 746 aaPredicted RBP15.99■□□□□ 0.15
RTN4-204ENST00000357732 KCNRGQ8N5I3 272 aa15.99■□□□□ 0.15
RTN4-204ENST00000357732 OR5M8Q8NGP6 311 aa15.99■□□□□ 0.15
RTN4-204ENST00000357732 ST8SIA2Q92186 375 aa15.99■□□□□ 0.15
RTN4-204ENST00000357732 SLC25A28Q96A46 364 aa15.99■□□□□ 0.15
RTN4-204ENST00000357732 SEH1LQ96EE3 360 aa15.99■□□□□ 0.15
RTN4-204ENST00000357732 KTI12Q96EK9 354 aaPredicted RBP15.99■□□□□ 0.15
RTN4-204ENST00000357732 DHDHQ9UQ10 334 aa15.99■□□□□ 0.15
RTN4-204ENST00000357732 SZT2Q5T011 3432 aa15.98■□□□□ 0.15
RTN4-204ENST00000357732 DEFB110Q30KQ9 67 aa15.98■□□□□ 0.15
RTN4-204ENST00000357732 LY6G6FQ5SQ64 297 aa15.98■□□□□ 0.15
RTN4-204ENST00000357732 TMEM225Q6GV28 225 aa15.98■□□□□ 0.15
RTN4-204ENST00000357732 LIN54Q6MZP7 749 aa15.98■□□□□ 0.15
RTN4-204ENST00000357732 TMEM17Q86X19 198 aa15.98■□□□□ 0.15
RTN4-204ENST00000357732 BEST3Q8N1M1 668 aa15.98■□□□□ 0.15
RTN4-204ENST00000357732 OR52H1Q8NGJ2 320 aa15.98■□□□□ 0.15
RTN4-204ENST00000357732 OR1J4Q8NGS1 313 aa15.98■□□□□ 0.15
RTN4-204ENST00000357732 OR8K3Q8NH51 312 aa15.98■□□□□ 0.15
RTN4-204ENST00000357732 DUSP19Q8WTR2 217 aa15.98■□□□□ 0.15
RTN4-204ENST00000357732 MRGPRX1Q96LB2 322 aa15.98■□□□□ 0.15
RTN4-204ENST00000357732 SLC6A15Q9H2J7 730 aa15.98■□□□□ 0.15
RTN4-204ENST00000357732 SLC2A8Q9NY64 477 aa15.98■□□□□ 0.15
RTN4-204ENST00000357732 KCNG2Q9UJ96 466 aa15.98■□□□□ 0.15
RTN4-204ENST00000357732 TRAV36DV7A0A075B6V5 113 aa15.98■□□□□ 0.15
RTN4-204ENST00000357732 TRAV14DV4A0A0A6YYC5 116 aa15.98■□□□□ 0.15
RTN4-204ENST00000357732 EIF4E2O60573 245 aaKnown RBP15.98■□□□□ 0.15
RTN4-204ENST00000357732 KDM4BO94953 1096 aa15.98■□□□□ 0.15
RTN4-204ENST00000357732 HLA-GP17693 338 aa15.98■□□□□ 0.15
RTN4-204ENST00000357732 MPZP25189 248 aa15.98■□□□□ 0.15
RTN4-204ENST00000357732 HTR2CP28335 458 aa15.98■□□□□ 0.15
RTN4-204ENST00000357732 TACR3P29371 465 aa15.98■□□□□ 0.15
RTN4-204ENST00000357732 PBX2P40425 430 aa15.98■□□□□ 0.15
RTN4-204ENST00000357732 MEF2DQ14814 521 aa15.98■□□□□ 0.15
RTN4-204ENST00000357732 MEP1BQ16820 701 aa15.98■□□□□ 0.15
RTN4-204ENST00000357732 C9orf50Q5SZB4 431 aa15.98■□□□□ 0.15
RTN4-204ENST00000357732 YOD1Q5VVQ6 348 aaPredicted RBP15.98■□□□□ 0.15
RTN4-204ENST00000357732 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.98■□□□□ 0.15
RTN4-204ENST00000357732 BIVMQ86UB2 503 aa15.98■□□□□ 0.15
RTN4-204ENST00000357732 ZNF563Q8TA94 476 aa15.98■□□□□ 0.15
RTN4-204ENST00000357732 TAAR8Q969N4 342 aa15.98■□□□□ 0.15
RTN4-204ENST00000357732 MRPS24Q96EL2 167 aaKnown RBP15.98■□□□□ 0.15
RTN4-204ENST00000357732 SLC41A2Q96JW4 573 aa15.98■□□□□ 0.15
RTN4-204ENST00000357732 SLC46A1Q96NT5 459 aa15.98■□□□□ 0.15
RTN4-204ENST00000357732 PBX4Q9BYU1 374 aa15.98■□□□□ 0.15
RTN4-204ENST00000357732 TCEAL2Q9H3H9 227 aaPredicted RBP15.98■□□□□ 0.15
RTN4-204ENST00000357732 GPR160Q9UJ42 338 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms