RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 TMEM239Q8WW34 195 aa8.71□□□□□ -1.02
LINC01560-201ENST00000357412 HDAC2Q92769 488 aaKnown RBP8.71□□□□□ -1.02
LINC01560-201ENST00000357412 NABP1Q96AH0 204 aa8.71□□□□□ -1.02
LINC01560-201ENST00000357412 SGTBQ96EQ0 304 aa8.71□□□□□ -1.02
LINC01560-201ENST00000357412 FAHD2AQ96GK7 314 aa8.71□□□□□ -1.02
LINC01560-201ENST00000357412 POM121L2Q96KW2 1035 aa8.71□□□□□ -1.02
LINC01560-201ENST00000357412 MAGEB18Q96M61 343 aa8.71□□□□□ -1.02
LINC01560-201ENST00000357412 LRMDAQ9H2I8 198 aa8.71□□□□□ -1.02
LINC01560-201ENST00000357412 ZNF665Q9H7R5 613 aa8.71□□□□□ -1.02
LINC01560-201ENST00000357412 NPHS2Q9NP85 383 aa8.71□□□□□ -1.02
LINC01560-201ENST00000357412 INIPQ9NRY2 104 aa8.71□□□□□ -1.02
LINC01560-201ENST00000357412 GPR160Q9UJ42 338 aa8.71□□□□□ -1.02
LINC01560-201ENST00000357412 CACNG2Q9Y698 323 aa8.71□□□□□ -1.02
LINC01560-201ENST00000357412 TRAV20A0A0B4J274 112 aa8.7□□□□□ -1.02
LINC01560-201ENST00000357412 IGHV1-69-2A0A0G2JMI3 117 aa8.7□□□□□ -1.02
LINC01560-201ENST00000357412 A0A0G2JND7 137 aa8.7□□□□□ -1.02
LINC01560-201ENST00000357412 IQCMA0A1B0GVH7 501 aa8.7□□□□□ -1.02
LINC01560-201ENST00000357412 NPIPB13A6NJU9 1138 aa8.7□□□□□ -1.02
LINC01560-201ENST00000357412 NPIPB4C9JG80 1138 aa8.7□□□□□ -1.02
LINC01560-201ENST00000357412 EDF1O60869 148 aaKnown RBP8.7□□□□□ -1.02
LINC01560-201ENST00000357412 SHOX2O60902 331 aaPredicted RBP8.7□□□□□ -1.02
LINC01560-201ENST00000357412 IGHV3-13P01766 116 aa8.7□□□□□ -1.02
LINC01560-201ENST00000357412 ZNF32P17041 273 aa8.7□□□□□ -1.02
LINC01560-201ENST00000357412 APLNRP35414 380 aa8.7□□□□□ -1.02
LINC01560-201ENST00000357412 WNT5AP41221 380 aa8.7□□□□□ -1.02
LINC01560-201ENST00000357412 DAP3P51398 398 aaKnown RBP8.7□□□□□ -1.02
LINC01560-201ENST00000357412 MMP15P51511 669 aa8.7□□□□□ -1.02
LINC01560-201ENST00000357412 TAS2R41P59536 307 aa8.7□□□□□ -1.02
LINC01560-201ENST00000357412 MVKQ03426 396 aa8.7□□□□□ -1.02
LINC01560-201ENST00000357412 HSF2Q03933 536 aa8.7□□□□□ -1.02
LINC01560-201ENST00000357412 GLO1Q04760 184 aa8.7□□□□□ -1.02
LINC01560-201ENST00000357412 FMODQ06828 376 aa8.7□□□□□ -1.02
LINC01560-201ENST00000357412 CYLC2Q14093 348 aaPredicted RBP8.7□□□□□ -1.02
LINC01560-201ENST00000357412 LAPTM4AQ15012 233 aa8.7□□□□□ -1.02
LINC01560-201ENST00000357412 MOGQ16653 247 aa8.7□□□□□ -1.02
LINC01560-201ENST00000357412 ACSM5Q6NUN0 579 aa8.7□□□□□ -1.02
LINC01560-201ENST00000357412 SLC25A47Q6Q0C1 308 aa8.7□□□□□ -1.02
LINC01560-201ENST00000357412 USP51Q70EK9 711 aa8.7□□□□□ -1.02
LINC01560-201ENST00000357412 ICA1LQ8NDH6 482 aa8.7□□□□□ -1.02
LINC01560-201ENST00000357412 OR8J3Q8NGG0 315 aa8.7□□□□□ -1.02
LINC01560-201ENST00000357412 SNX33Q8WV41 574 aa8.7□□□□□ -1.02
LINC01560-201ENST00000357412 NSMAFQ92636 917 aa8.7□□□□□ -1.02
LINC01560-201ENST00000357412 ZNF583Q96ND8 569 aa8.7□□□□□ -1.02
LINC01560-201ENST00000357412 SIKE1Q9BRV8 207 aa8.7□□□□□ -1.02
LINC01560-201ENST00000357412 POLR2J2Q9GZM3 115 aaKnown RBP8.7□□□□□ -1.02
LINC01560-201ENST00000357412 POLR2J3Q9H1A7 115 aaKnown RBP8.7□□□□□ -1.02
LINC01560-201ENST00000357412 SMURF2Q9HAU4 748 aa8.7□□□□□ -1.02
LINC01560-201ENST00000357412 RIMS3Q9UJD0 308 aa8.7□□□□□ -1.02
LINC01560-201ENST00000357412 BAG5Q9UL15 447 aa8.7□□□□□ -1.02
LINC01560-201ENST00000357412 WIPI2Q9Y4P8 454 aa8.7□□□□□ -1.02
LINC01560-201ENST00000357412 LOC100509620A0A075B734 347 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 LOC105371242A0A075B767 164 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 HMGB1P1B2RPK0 211 aaPredicted RBP8.69□□□□□ -1.02
LINC01560-201ENST00000357412 PLPP2O43688 288 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 MPZL1O95297 269 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 PNPP00491 289 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 IGHV1-46P01743 117 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 IGHV2-5P01817 119 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 VIMP08670 466 aaKnown RBP8.69□□□□□ -1.02
LINC01560-201ENST00000357412 THRBP10828 461 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 ANPEPP15144 967 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 MAKP20794 623 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 FUT4P22083 530 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 CCNOP22674 350 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 STOMP27105 288 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 CFPP27918 469 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 MPV17P39210 176 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 OR1E2P47887 323 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 ZNF81P51508 661 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 HILS1P60008 231 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 PSG4Q00888 419 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 TEKQ02763 1124 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 COQ5Q5HYK3 327 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 SPATA46Q5T0L3 261 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 THEM4Q5T1C6 240 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 FAM27BQ5VT28 67 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 SHQ1Q6PI26 577 aaKnown RBP8.69□□□□□ -1.02
LINC01560-201ENST00000357412 C12orf54Q6X4T0 127 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 THSD4Q6ZMP0 1018 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 HDDC2Q7Z4H3 204 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 CLDN22Q8N7P3 220 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 OR1J1Q8NGS3 322 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 AKR7LQ8NHP1 331 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 LRRC58Q96CX6 371 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 MARS2Q96GW9 593 aaKnown RBP8.69□□□□□ -1.02
LINC01560-201ENST00000357412 SH3GL1Q99961 368 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 TMPRSS13Q9BYE2 586 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 TXNIPQ9H3M7 391 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 SAP30LQ9HAJ7 183 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 DECR2Q9NUI1 292 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 STX18Q9P2W9 335 aaKnown RBP8.69□□□□□ -1.02
LINC01560-201ENST00000357412 HIF3AQ9Y2N7 669 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 MED31Q9Y3C7 131 aa8.69□□□□□ -1.02
LINC01560-201ENST00000357412 C5orf49A4QMS7 147 aa8.68□□□□□ -1.02
LINC01560-201ENST00000357412 ZSCAN5BA6NJL1 495 aa8.68□□□□□ -1.02
LINC01560-201ENST00000357412 CLDN25C9JDP6 229 aa8.68□□□□□ -1.02
LINC01560-201ENST00000357412 SPRY3O43610 288 aa8.68□□□□□ -1.02
LINC01560-201ENST00000357412 PIP5K1CO60331 668 aa8.68□□□□□ -1.02
LINC01560-201ENST00000357412 RGS9O75916 674 aaPredicted RBP8.68□□□□□ -1.02
LINC01560-201ENST00000357412 UBOX5O94941 541 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms