RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 OR52R1Q8NGF1 315 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 OR51S1Q8NGJ8 323 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 OR1S2Q8NGQ3 325 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 DUSP19Q8WTR2 217 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 ZMAT3Q9HA38 289 aaKnown RBP7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 FGF22Q9HCT0 170 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 MKKSQ9NPJ1 570 aaPredicted RBP7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 TAS2R5Q9NYW4 299 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 PISDQ9UG56 409 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 FOXJ3Q9UPW0 622 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 SLC27A6Q9Y2P4 619 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 COLEC10Q9Y6Z7 277 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 TRAV18A0A075B6X5 111 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 H0Y8X5 98 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 F13BP05160 661 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 CD2P06729 351 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 VSIG10L2P0DP72 767 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 NR2C1P13056 603 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 VAMP1P23763 118 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 DPP4P27487 766 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 BDKRB2P30411 391 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 HTR5AP47898 357 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 LTBQ06643 244 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 FAM53BQ14153 422 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 DEFB110Q30KQ9 67 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 LBHQ53QV2 105 aaPredicted RBP7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 LIPNQ5VXI9 398 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 ZNF626Q68DY1 528 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 KIRREL2Q6UWL6 708 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 STAC2Q6ZMT1 411 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 ZNF761Q86XN6 746 aaPredicted RBP7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 GLB1L2Q8IW92 636 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 TEX19Q8NA77 164 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 OR51D1Q8NGF3 324 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 OR10AC1Q8NH08 325 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 OR5AK2Q8NH90 309 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 TSACCQ96A04 125 aaPredicted RBP7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 TMEM106AQ96A25 262 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 RERGQ96A58 199 aaPredicted RBP7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 C14orf79Q96F83 325 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 TEX101Q9BY14 249 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 PBX4Q9BYU1 374 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 TREM1Q9NP99 234 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 ASF1BQ9NVP2 202 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 ANKRD10Q9NXR5 420 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 C19orf53Q9UNZ5 99 aaPredicted RBP7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 A0A0B4J2E0 115 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 A0A1B0GX12 115 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 ANKRD20A5PA0PJZ0 165 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 NAP1L6A6NFF2 107 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 PRR32B1ATL7 298 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 F5H5P2 479 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 FGF19O95750 216 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 GPANK1O95872 356 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 HLA-DQA2P01906 255 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 MBP02144 154 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 OR8U8P0C7N1 319 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 RPA2P15927 270 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 RPS15AP62244 130 aaKnown RBP7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 PLAURQ03405 335 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 C2orf27AQ580R0 203 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 FAM78AQ5JUQ0 283 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 TCEAL6Q6IPX3 200 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 RAB12Q6IQ22 244 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 TMEM71Q6P5X7 295 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 NDUFAF7Q7L592 441 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 PARGQ86W56 976 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 TGIF2LXQ8IUE1 241 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 MUC20Q8N307 709 aaPredicted RBP7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 OR51A4Q8NGJ6 313 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 OR4C16Q8NGL9 310 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 OR6N2Q8NGY6 317 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 CMTM3Q96MX0 182 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 LMF1Q96S06 567 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 SOX7Q9BT81 388 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 ALG12Q9BV10 488 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 CHST6Q9GZX3 395 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 WNT5BQ9H1J7 359 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 TRPV4Q9HBA0 871 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 SMCO4Q9NRQ5 59 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 RXFP3Q9NSD7 469 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 SPACA6W5XKT8 324 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 CTDSPLO15194 276 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 DOK2O60496 412 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 NDUFB6O95139 128 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 LYPD3O95274 346 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 EDN3P14138 238 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 FAUP35544 74 aaKnown RBP7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 AQP2P41181 271 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 DIO1P49895 249 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 PPP2CBP62714 309 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 PPP2CAP67775 309 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 GAS6Q14393 721 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 PRRT3Q5FWE3 981 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 OR2W3Q7Z3T1 314 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 SYS1Q8N2H4 156 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 KDF1Q8NAX2 398 aaPredicted RBP7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 TSEN15Q8WW01 171 aaKnown RBP7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 PATE1Q8WXA2 126 aa7.49□□□□□ -1.21
CDC42SE1-201ENST00000357235 RGP1Q92546 391 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms