RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 RSPO1Q2MKA7 263 aaPredicted RBP3.53□□□□□ -1.84
LIG4-201ENST00000356922 RIPPLY2Q5TAB7 128 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 FBXW9Q5XUX1 488 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 SLC25A47Q6Q0C1 308 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 SKA3Q8IX90 412 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 LRRC18Q8N456 261 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 LINC00471Q8N535 108 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 DRAXINQ8NBI3 349 aaPredicted RBP3.53□□□□□ -1.84
LIG4-201ENST00000356922 LILRB4Q8NHJ6 448 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 FAM81AQ8TBF8 368 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 CA5BP1Q8WTZ4 195 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 TMEM45BQ96B21 275 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 APH1AQ96BI3 265 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 FBXO17Q96EF6 278 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 LRR1Q96L50 414 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 OR51V1Q9H2C8 321 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 SLCO5A1Q9H2Y9 848 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 SLC25A19Q9HC21 320 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 EMC7Q9NPA0 242 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 PAK1IP1Q9NWT1 392 aaPredicted RBP3.53□□□□□ -1.84
LIG4-201ENST00000356922 GALNT8Q9NY28 637 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 H2AFY2Q9P0M6 372 aaPredicted RBP3.53□□□□□ -1.84
LIG4-201ENST00000356922 MALT1Q9UDY8 824 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 EMC9Q9Y3B6 208 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 HEATR1Q9H583 2144 aaKnown RBP3.53□□□□□ -1.84
LIG4-201ENST00000356922 CIB4A0PJX0 185 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 A1L4Q6 167 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 CLEC18AA5D8T8 446 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 XPNPEP2O43895 674 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 RAD51DO75771 328 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 THBDP07204 575 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 CELA3BP08861 270 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 CCL2P13500 99 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 SPI1P17947 270 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 PTGER4P35408 488 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 PCYT1AP49585 367 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 CLEC18BQ6UXF7 455 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 Q6ZT83 130 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 NAA40Q86UY6 237 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 WDR31Q8NA23 367 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 CLEC18CQ8NCF0 446 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 LINC01560Q8TB33 94 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 TEX47Q8TBZ9 253 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 SLC7A6Q92536 515 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 ZMYND19Q96E35 227 aaPredicted RBP3.53□□□□□ -1.84
LIG4-201ENST00000356922 TEAD3Q99594 435 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 PITX2Q99697 317 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 VSX1Q9NZR4 365 aaPredicted RBP3.53□□□□□ -1.84
LIG4-201ENST00000356922 MYRFQ9Y2G1 1151 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 POLR1DQ9Y2S0 133 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 KLHDC2Q9Y2U9 406 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 A0A1W2PPR1 153 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 CCDC182A6NF36 153 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 PSMD9O00233 223 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 HLA-HP01893 362 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 MRPL3P09001 348 aaKnown RBP3.52□□□□□ -1.85
LIG4-201ENST00000356922 CD8BP10966 210 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 APEHP13798 732 aaKnown RBP3.52□□□□□ -1.85
LIG4-201ENST00000356922 LAP3P28838 519 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 FMO3P31513 532 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 RBMXP38159 391 aaKnown RBP3.52□□□□□ -1.85
LIG4-201ENST00000356922 CD79BP40259 229 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 VHLP40337 213 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 SMSP52788 366 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 GABRA6Q16445 453 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 ZNF691Q5VV52 312 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 KLHL24Q6TFL4 600 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 SSX6Q7RTT6 188 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 ZBTB46Q86UZ6 589 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 ZNF584Q8IVC4 421 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 ZNF433Q8N7K0 673 aaPredicted RBP3.52□□□□□ -1.85
LIG4-201ENST00000356922 CPEB3Q8NE35 698 aaKnown RBP3.52□□□□□ -1.85
LIG4-201ENST00000356922 NOXO1Q8NFA2 376 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 OR6K3Q8NGY3 331 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 S100PBPQ96BU1 408 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 ZNF75AQ96N20 296 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 WFIKKN1Q96NZ8 548 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 ZNF649Q9BS31 505 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 TTTY10Q9BZA0 68 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 VCX3BQ9H321 246 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 TAS2R16Q9NYV7 291 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 METRNQ9UJH8 293 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 SLC5A6Q9Y289 635 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 GMPPBQ9Y5P6 360 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 NAV2Q8IVL1 2488 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 HTR3EA5X5Y0 456 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 NPIPB13A6NJU9 1138 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 NPIPB4C9JG80 1138 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 GPR171O14626 319 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 DHHO43323 396 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 AKAP8O43823 692 aaKnown RBP3.52□□□□□ -1.85
LIG4-201ENST00000356922 SELENOFO60613 162 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 IGHG1P01857 330 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 HOXD4P09016 255 aaPredicted RBP3.52□□□□□ -1.85
LIG4-201ENST00000356922 GAAP10253 952 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 FCGR2AP12318 317 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 CSNK1A1P48729 337 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 ZNF133P52736 654 aaPredicted RBP3.52□□□□□ -1.85
LIG4-201ENST00000356922 CDK5R2Q13319 367 aa3.52□□□□□ -1.85
LIG4-201ENST00000356922 SNCBQ16143 134 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms