RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 RGRP47804 291 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 BTG1P62324 171 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 CSNK1G2P78368 415 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 SEMA3BQ13214 749 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 SELENBP1Q13228 472 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 MARCH8Q5T0T0 291 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 FAM71E1Q6IPT2 247 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 CDC20BQ86Y33 519 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 PTRH1Q86Y79 214 aaKnown RBP5.94□□□□□ -1.46
UPF2-201ENST00000356352 TMEM255BQ8WV15 326 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 UTP4Q969X6 686 aaKnown RBP5.94□□□□□ -1.46
UPF2-201ENST00000356352 SHISA4Q96DD7 197 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 GNPNAT1Q96EK6 184 aaPredicted RBP5.94□□□□□ -1.46
UPF2-201ENST00000356352 TPPP3Q9BW30 176 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 ZDHHC5Q9C0B5 715 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 CXorf36Q9H7Y0 433 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 LIN7CQ9NUP9 197 aaKnown RBP5.94□□□□□ -1.46
UPF2-201ENST00000356352 CHRNA9Q9UGM1 479 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 FBXL4Q9UKA2 621 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 SH2D7A6NKC9 451 aaPredicted RBP5.94□□□□□ -1.46
UPF2-201ENST00000356352 TMEM127O75204 238 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 NID1P14543 1247 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 CTRB1P17538 263 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 NDUFB7P17568 137 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 HOXD12P35452 270 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 TGM4P49221 684 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 TPBGQ13641 420 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 DUSP6Q16828 381 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 THEM4Q5T1C6 240 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 PRAMEF5Q5TYX0 476 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 PRAMEF6Q5VXH4 476 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 NKAIN2Q5VXU1 208 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 CD276Q5ZPR3 534 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 C18orf63Q68DL7 685 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 CTRB2Q6GPI1 263 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 TSEN54Q7Z6J9 526 aaKnown RBP5.94□□□□□ -1.46
UPF2-201ENST00000356352 LINC00346Q8IVM7 164 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 PNPLA1Q8N8W4 532 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 FBXO27Q8NI29 283 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 SCARB1Q8WTV0 552 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 ISL2Q96A47 359 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 PLK3Q9H4B4 646 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 LAMP3Q9UQV4 416 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 B3GALT5Q9Y2C3 310 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 A0A087WZY1 265 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 BHLHE40O14503 412 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 HOXC11O43248 304 aaPredicted RBP5.94□□□□□ -1.46
UPF2-201ENST00000356352 SORBS2O94875 1100 aaKnown RBP5.94□□□□□ -1.46
UPF2-201ENST00000356352 PTGER1P34995 402 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 HTR4Q13639 388 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 CRMP1Q14194 572 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 CLINT1Q14677 625 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 ADIRFQ15847 76 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 TAF9Q16594 264 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 FXNQ16595 210 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 TIGITQ495A1 244 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 GLYATL3Q5SZD4 288 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 BTNL8Q6UX41 500 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 B3GNT9Q6UX72 402 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 ZNF620Q6ZNG0 422 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 RPS19BP1Q86WX3 136 aaKnown RBP5.94□□□□□ -1.46
UPF2-201ENST00000356352 ZNF573Q86YE8 665 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 ENTHD1Q8IYW4 607 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 ARFGAP1Q8N6T3 406 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 OR13C8Q8NGS7 320 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 OR10X1Q8NGY0 326 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 LILRB4Q8NHJ6 448 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 NRG4Q8WWG1 115 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 PIGTQ969N2 578 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 EGLN2Q96KS0 407 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 TECTBQ96PL2 329 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 TAAR6Q96RI8 345 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 SOX7Q9BT81 388 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 LAT2Q9GZY6 243 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 C12orf49Q9H741 205 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 FBXL2Q9UKC9 423 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 OSGIN2Q9Y236 505 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 A0A0U1RQS6 177 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 SLC5A10A0PJK1 596 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 H0YIG0 161 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 B4GAT1O43505 415 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 PLRG1O43660 514 aaKnown RBP5.93□□□□□ -1.46
UPF2-201ENST00000356352 IL2RAP01589 272 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 GRPP07492 148 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 SHC1P29353 583 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 TAGLN2P37802 199 aaKnown RBP5.93□□□□□ -1.46
UPF2-201ENST00000356352 CCR5P51681 352 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 DHODHQ02127 395 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 EDDM3AQ14507 147 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 SMAD2Q15796 467 aaKnown RBP5.93□□□□□ -1.46
UPF2-201ENST00000356352 LEXMQ3ZCV2 418 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 FAM122BQ7Z309 247 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 CAMKMTQ7Z624 323 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 SIAH3Q8IW03 269 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 IFI44Q8TCB0 444 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 ASB13Q8WXK3 278 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 CIB3Q96Q77 187 aaPredicted RBP5.93□□□□□ -1.46
UPF2-201ENST00000356352 P2RY12Q9H244 342 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 POFUT1Q9H488 388 aa5.93□□□□□ -1.46
UPF2-201ENST00000356352 ZNF576Q9H609 170 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms