RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 SLC10A3P09131 477 aa5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 PSMB1P20618 241 aaKnown RBP5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 ADRA1AP35348 466 aa5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 YPEL5P62699 121 aa5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 TBCEQ15813 527 aaPredicted RBP5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 MRPL10Q7Z7H8 261 aaKnown RBP5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 TMEM130Q8N3G9 435 aa5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 SLC25A21Q9BQT8 299 aaPredicted RBP5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 SLCO5A1Q9H2Y9 848 aa5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 GAREM1Q9H706 876 aa5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 RNF150Q9ULK6 438 aa5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 HTR1FP30939 366 aa5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 MAP2K6P52564 334 aa5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 WDTC1Q8N5D0 677 aa5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 FYTTD1Q96QD9 318 aaKnown RBP5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 ACTR3CQ9C0K3 210 aaPredicted RBP5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 ZNF586Q9NXT0 402 aa5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 A3GALT2U3KPV4 340 aa5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 PLRG1O43660 514 aaKnown RBP5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 RPS25P62851 125 aaKnown RBP5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 PDZD11Q5EBL8 140 aa5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 GLIPR1L1Q6UWM5 242 aa5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 TMEM182Q6ZP80 229 aaPredicted RBP5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 MED18Q9BUE0 208 aa5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 CLMPQ9H6B4 373 aa5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 COL9A3Q14050 684 aaPredicted RBP5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 HENMT1Q5T8I9 393 aaKnown RBP5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 UFSP2Q9NUQ7 469 aa5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 MMACHCQ9Y4U1 282 aa5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 GPR45Q9Y5Y3 372 aa5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 PMS2P2O95744 297 aa5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 OR10A3P58181 314 aa5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 ZNF425Q6IV72 752 aa5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 ABCA1O95477 2261 aa5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 GPR37O15354 613 aa5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 EIF2DP41214 584 aaKnown RBP5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 ZNF140P52738 457 aaPredicted RBP5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 HTRA4P83105 476 aaPredicted RBP5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 OR52I1Q8NGK6 324 aa5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 ZNF480Q8WV37 535 aa5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 CCDC74BQ96LY2 380 aa5.33□□□□□ -1.56
SRGAP1-201ENST00000355086 CTXN2P0C2S0 81 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 RPS16P62249 146 aaKnown RBP5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 SLC29A1Q99808 456 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 PDGFBP01127 241 aaPredicted RBP5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 CDK5Q00535 292 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 MS4A2Q01362 244 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 PLXDC2Q6UX71 529 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 MBOAT2Q6ZWT7 520 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 RASD2Q96D21 266 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 C1QTNF6Q9BXI9 259 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 SLC5A12Q1EHB4 618 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 ZNF789Q5FWF6 425 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 C19orf35Q6ZS72 473 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 DCXRQ7Z4W1 244 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 OR6K3Q8NGY3 331 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 AK3Q9UIJ7 227 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 S100A11P31949 105 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 NPY5RQ15761 445 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 OR10R2Q8NGX6 335 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 OR2AE1Q8NHA4 323 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 ADAM29Q9UKF5 820 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 ATG2BQ96BY7 2078 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 G3V3Q6 166 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 PIPP12273 146 aaPredicted RBP5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 SUMO1P63165 101 aaKnown RBP5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 HTR3DQ70Z44 454 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 H1FNTQ75WM6 255 aaPredicted RBP5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 KLHDC8BQ8IXV7 354 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 OR10P1Q8NGE3 313 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 GPR173Q9NS66 373 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 SLC23A1Q9UHI7 598 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 FAM166BA8MTA8 275 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 ATXN1LP0C7T5 689 aaKnown RBP5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 SHC1P29353 583 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 SLC6A11P48066 632 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 FAM3DQ96BQ1 224 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 TIMM9Q9Y5J7 89 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 GALR2O43603 387 aaPredicted RBP5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 SIRT6Q8N6T7 355 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 L3MBTL4Q8NA19 623 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 GPR26Q8NDV2 337 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 CHST11Q9NPF2 352 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 ZNF835Q9Y2P0 537 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 GPR55Q9Y2T6 319 aaPredicted RBP5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 PMS2P1A4D2B8 440 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 C5orf49A4QMS7 147 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 CTSCP53634 463 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 SPACA1Q9HBV2 294 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 POLDIP2Q9Y2S7 368 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 PRSS21Q9Y6M0 314 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 EN2P19622 333 aaPredicted RBP5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 SEMA3BQ13214 749 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 OR5M1Q8NGP8 315 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 HCRTR1O43613 425 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 BAMBIQ13145 260 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 TIGITQ495A1 244 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 KDM4DQ6B0I6 523 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 CBY3A6NI87 242 aa5.32□□□□□ -1.56
SRGAP1-201ENST00000355086 COX7A2P2O60397 106 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms