RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 GUSBP08236 651 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 SNRPBP14678 240 aaKnown RBP9.16□□□□□ -0.94
SYNE1-203ENST00000354674 RAB2AP61019 212 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 FOXK2Q01167 660 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 MLLT11Q13015 90 aaPredicted RBP9.16□□□□□ -0.94
SYNE1-203ENST00000354674 PEA15Q15121 130 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 DCAF12L2Q5VW00 463 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 ETFRF1Q6IPR1 90 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 MZT2AQ6P582 158 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 TIPARPQ7Z3E1 657 aaKnown RBP9.16□□□□□ -0.94
SYNE1-203ENST00000354674 SZRD1Q7Z422 152 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 TMEM17Q86X19 198 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 ZNF615Q8N8J6 731 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 OR52R1Q8NGF1 315 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 XAGE5Q8WWM1 108 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 TSLPQ969D9 159 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 ZPBPQ9BS86 351 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 YIPF4Q9BSR8 244 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 RSPO3Q9BXY4 272 aaPredicted RBP9.16□□□□□ -0.94
SYNE1-203ENST00000354674 A6NLC8 198 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 DBX1A6NMT0 343 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 HRKO00198 91 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 GOSR2O14653 212 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 SLC25A12O75746 678 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 MT-CO3P00414 261 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 CHRM4P08173 479 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 BDKRB2P30411 391 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 EXOSC7Q15024 291 aaKnown RBP9.16□□□□□ -0.94
SYNE1-203ENST00000354674 SLC25A35Q3KQZ1 300 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 ARHGAP11BQ3KRB8 267 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 KIAA1143Q96AT1 154 aaPredicted RBP9.16□□□□□ -0.94
SYNE1-203ENST00000354674 DNAJA3Q96EY1 480 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 DOHHQ9BU89 302 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 DDA1Q9BW61 102 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 SPRY4Q9C004 299 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 WDR13Q9H1Z4 485 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 WDR54Q9H977 334 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 ADAP2Q9NPF8 381 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 LOC100509620A0A075B734 347 aa9.15□□□□□ -0.94
SYNE1-203ENST00000354674 TMEM218A2RU14 115 aa9.15□□□□□ -0.94
SYNE1-203ENST00000354674 MED6O75586 246 aa9.15□□□□□ -0.94
SYNE1-203ENST00000354674 NKX2-2O95096 273 aa9.15□□□□□ -0.94
SYNE1-203ENST00000354674 IGKV3-11P04433 115 aa9.15□□□□□ -0.94
SYNE1-203ENST00000354674 C4BPBP20851 252 aa9.15□□□□□ -0.94
SYNE1-203ENST00000354674 ELAVL1Q15717 326 aaKnown RBP9.15□□□□□ -0.94
SYNE1-203ENST00000354674 DUSP5Q16690 384 aa9.15□□□□□ -0.94
SYNE1-203ENST00000354674 CCDC157Q569K6 752 aa9.15□□□□□ -0.94
SYNE1-203ENST00000354674 LRP11Q86VZ4 500 aa9.15□□□□□ -0.94
SYNE1-203ENST00000354674 APOBEC4Q8WW27 367 aaKnown RBP9.15□□□□□ -0.94
SYNE1-203ENST00000354674 ORAI1Q96D31 301 aa9.15□□□□□ -0.94
SYNE1-203ENST00000354674 VSTM2LQ96N03 204 aa9.15□□□□□ -0.94
SYNE1-203ENST00000354674 SOSTQ9BQB4 213 aa9.15□□□□□ -0.94
SYNE1-203ENST00000354674 WDFY3Q8IZQ1 3526 aa9.15□□□□□ -0.94
SYNE1-203ENST00000354674 A0A1W2PNU3 283 aaPredicted RBP9.15□□□□□ -0.95
SYNE1-203ENST00000354674 C5orf52A6NGY3 159 aa9.15□□□□□ -0.95
SYNE1-203ENST00000354674 FADS1O60427 444 aa9.15□□□□□ -0.95
SYNE1-203ENST00000354674 NME6O75414 186 aaPredicted RBP9.15□□□□□ -0.95
SYNE1-203ENST00000354674 DDAH2O95865 285 aa9.15□□□□□ -0.95
SYNE1-203ENST00000354674 ANXA8P13928 327 aa9.15□□□□□ -0.95
SYNE1-203ENST00000354674 PPP3CBP16298 524 aa9.15□□□□□ -0.95
SYNE1-203ENST00000354674 CD53P19397 219 aa9.15□□□□□ -0.95
SYNE1-203ENST00000354674 NOS3P29474 1203 aa9.15□□□□□ -0.95
SYNE1-203ENST00000354674 NR0B1P51843 470 aaKnown RBP9.15□□□□□ -0.95
SYNE1-203ENST00000354674 EIF3IQ13347 325 aaKnown RBP9.15□□□□□ -0.95
SYNE1-203ENST00000354674 OR7A5Q15622 319 aa9.15□□□□□ -0.95
SYNE1-203ENST00000354674 PLEKHN1Q494U1 663 aaPredicted RBP9.15□□□□□ -0.95
SYNE1-203ENST00000354674 RPS26P11Q5JNZ5 115 aaPredicted RBP9.15□□□□□ -0.95
SYNE1-203ENST00000354674 PYY3Q5JQD4 70 aa9.15□□□□□ -0.95
SYNE1-203ENST00000354674 OR7E24Q6IFN5 339 aa9.15□□□□□ -0.95
SYNE1-203ENST00000354674 GDPGP1Q6ZNW5 385 aa9.15□□□□□ -0.95
SYNE1-203ENST00000354674 LINGO2Q7L985 606 aa9.15□□□□□ -0.95
SYNE1-203ENST00000354674 ADAMTS15Q8TE58 950 aa9.15□□□□□ -0.95
SYNE1-203ENST00000354674 DOK4Q8TEW6 326 aa9.15□□□□□ -0.95
SYNE1-203ENST00000354674 TAAR9Q96RI9 348 aa9.15□□□□□ -0.95
SYNE1-203ENST00000354674 SLC38A1Q9H2H9 487 aa9.15□□□□□ -0.95
SYNE1-203ENST00000354674 POLE3Q9NRF9 147 aa9.15□□□□□ -0.95
SYNE1-203ENST00000354674 ZNF230Q9UIE0 474 aaPredicted RBP9.15□□□□□ -0.95
SYNE1-203ENST00000354674 GXYLT2A0PJZ3 443 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 A8MVJ9 347 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 C17orf105B2RV13 164 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 C5orf58C9J3I9 102 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 TM4SF5O14894 197 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 SLC28A2O43868 658 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 DPM1O60762 260 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 ZIC2O95409 532 aaPredicted RBP9.14□□□□□ -0.95
SYNE1-203ENST00000354674 NR2F1P10589 423 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 ABCD3P28288 659 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 H2BFSP57053 126 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 TAS2R60P59551 318 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 PSG6Q00889 435 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 MINDY4Q4G0A6 757 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 DCAF12Q5T6F0 453 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 FGD2Q7Z6J4 655 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 FAM219AQ8IW50 185 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 PROKR2Q8NFJ6 384 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 ZNF721Q8TF20 911 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 CDS1Q92903 461 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 OR10A5Q9H207 317 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 AKIRIN1Q9H9L7 192 aaPredicted RBP9.14□□□□□ -0.95
SYNE1-203ENST00000354674 CALML5Q9NZT1 146 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms