RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 PCDHGA9Q9Y5G4 932 aaKnown RBP18.25■□□□□ 0.51
TRIM4-202ENST00000354241 ZNF716A6NP11 495 aa18.24■□□□□ 0.51
TRIM4-202ENST00000354241 PHYHO14832 338 aa18.24■□□□□ 0.51
TRIM4-202ENST00000354241 QDPRP09417 244 aa18.24■□□□□ 0.51
TRIM4-202ENST00000354241 GAAP10253 952 aa18.24■□□□□ 0.51
TRIM4-202ENST00000354241 LSAMPQ13449 338 aa18.24■□□□□ 0.51
TRIM4-202ENST00000354241 BCL2A1Q16548 175 aa18.24■□□□□ 0.51
TRIM4-202ENST00000354241 GDPGP1Q6ZNW5 385 aa18.24■□□□□ 0.51
TRIM4-202ENST00000354241 PLEKHG7Q6ZR37 379 aa18.24■□□□□ 0.51
TRIM4-202ENST00000354241 USP43Q70EL4 1123 aa18.24■□□□□ 0.51
TRIM4-202ENST00000354241 FAM220AQ7Z4H9 259 aa18.24■□□□□ 0.51
TRIM4-202ENST00000354241 KBTBD8Q8NFY9 601 aa18.24■□□□□ 0.51
TRIM4-202ENST00000354241 IKZF2Q9UKS7 526 aa18.24■□□□□ 0.51
TRIM4-202ENST00000354241 FLVCR1Q9Y5Y0 555 aa18.24■□□□□ 0.51
TRIM4-202ENST00000354241 CYTIPO60759 359 aa18.23■□□□□ 0.51
TRIM4-202ENST00000354241 SYNGR4O95473 234 aa18.23■□□□□ 0.51
TRIM4-202ENST00000354241 OR8G3PP0DMU2 310 aa18.23■□□□□ 0.51
TRIM4-202ENST00000354241 PSMB10P40306 273 aa18.23■□□□□ 0.51
TRIM4-202ENST00000354241 SERPINB10P48595 397 aa18.23■□□□□ 0.51
TRIM4-202ENST00000354241 SELENOPP49908 381 aa18.23■□□□□ 0.51
TRIM4-202ENST00000354241 RASGEF1BQ0VAM2 473 aa18.23■□□□□ 0.51
TRIM4-202ENST00000354241 ZNF169Q14929 603 aaPredicted RBP18.23■□□□□ 0.51
TRIM4-202ENST00000354241 HIST3H3Q16695 136 aa18.23■□□□□ 0.51
TRIM4-202ENST00000354241 SLC25A47Q6Q0C1 308 aa18.23■□□□□ 0.51
TRIM4-202ENST00000354241 IGFL3Q6UXB1 125 aa18.23■□□□□ 0.51
TRIM4-202ENST00000354241 LRRC69Q6ZNQ3 347 aa18.23■□□□□ 0.51
TRIM4-202ENST00000354241 YIPF7Q8N8F6 280 aa18.23■□□□□ 0.51
TRIM4-202ENST00000354241 PNPLA2Q96AD5 504 aa18.23■□□□□ 0.51
TRIM4-202ENST00000354241 GLTPQ9NZD2 209 aa18.23■□□□□ 0.51
TRIM4-202ENST00000354241 KLHL9Q9P2J3 617 aa18.23■□□□□ 0.51
TRIM4-202ENST00000354241 SPRR3Q9UBC9 169 aa18.23■□□□□ 0.51
TRIM4-202ENST00000354241 RRP8O43159 456 aaKnown RBP18.23■□□□□ 0.51
TRIM4-202ENST00000354241 KRT8P05787 483 aa18.23■□□□□ 0.51
TRIM4-202ENST00000354241 NR2C1P13056 603 aa18.23■□□□□ 0.51
TRIM4-202ENST00000354241 LAP3P28838 519 aa18.23■□□□□ 0.51
TRIM4-202ENST00000354241 UGT2B10P36537 528 aa18.23■□□□□ 0.51
TRIM4-202ENST00000354241 SLC3A1Q07837 685 aa18.23■□□□□ 0.51
TRIM4-202ENST00000354241 GPR50Q13585 617 aa18.23■□□□□ 0.51
TRIM4-202ENST00000354241 EIF2B1Q14232 305 aaKnown RBP18.23■□□□□ 0.51
TRIM4-202ENST00000354241 ZNF684Q5T5D7 378 aa18.23■□□□□ 0.51
TRIM4-202ENST00000354241 SLC18B1Q6NT16 456 aa18.23■□□□□ 0.51
TRIM4-202ENST00000354241 TMEM123Q8N131 208 aa18.23■□□□□ 0.51
TRIM4-202ENST00000354241 DYNC2LI1Q8TCX1 351 aa18.23■□□□□ 0.51
TRIM4-202ENST00000354241 ABHD3Q8WU67 409 aa18.23■□□□□ 0.51
TRIM4-202ENST00000354241 TMEM54Q969K7 222 aa18.23■□□□□ 0.51
TRIM4-202ENST00000354241 AMELYQ99218 206 aa18.23■□□□□ 0.51
TRIM4-202ENST00000354241 SEC61A2Q9H9S3 476 aa18.23■□□□□ 0.51
TRIM4-202ENST00000354241 MRM2Q9UI43 246 aaKnown RBP18.23■□□□□ 0.51
TRIM4-202ENST00000354241 ST6GALNAC2Q9UJ37 374 aa18.23■□□□□ 0.51
TRIM4-202ENST00000354241 METTL15A6NJ78 407 aa18.22■□□□□ 0.51
TRIM4-202ENST00000354241 TACSTD2P09758 323 aa18.22■□□□□ 0.51
TRIM4-202ENST00000354241 SH3BGRP55822 239 aaPredicted RBP18.22■□□□□ 0.51
TRIM4-202ENST00000354241 FABP5Q01469 135 aa18.22■□□□□ 0.51
TRIM4-202ENST00000354241 EGR3Q06889 387 aa18.22■□□□□ 0.51
TRIM4-202ENST00000354241 LRFN4Q6PJG9 635 aa18.22■□□□□ 0.51
TRIM4-202ENST00000354241 PLXDC2Q6UX71 529 aa18.22■□□□□ 0.51
TRIM4-202ENST00000354241 OR10H5Q8NGA6 315 aa18.22■□□□□ 0.51
TRIM4-202ENST00000354241 C11orf40Q8WZ69 217 aa18.22■□□□□ 0.51
TRIM4-202ENST00000354241 TXNL4BQ9NX01 149 aaKnown RBP18.22■□□□□ 0.51
TRIM4-202ENST00000354241 PAQR5Q9NXK6 330 aaPredicted RBP18.22■□□□□ 0.51
TRIM4-202ENST00000354241 MCTS1Q9ULC4 181 aaKnown RBP18.22■□□□□ 0.51
TRIM4-202ENST00000354241 LOC400499M0QZD8 3231 aa18.22■□□□□ 0.51
TRIM4-202ENST00000354241 PLPP2O43688 288 aa18.21■□□□□ 0.51
TRIM4-202ENST00000354241 ZNF432O94892 652 aa18.21■□□□□ 0.51
TRIM4-202ENST00000354241 RPP14O95059 124 aaKnown RBP18.21■□□□□ 0.51
TRIM4-202ENST00000354241 PDGFAP04085 211 aa18.21■□□□□ 0.51
TRIM4-202ENST00000354241 EDNRAP25101 427 aa18.21■□□□□ 0.51
TRIM4-202ENST00000354241 SIRPAP78324 504 aa18.21■□□□□ 0.51
TRIM4-202ENST00000354241 PHYHD1Q5SRE7 291 aa18.21■□□□□ 0.51
TRIM4-202ENST00000354241 C22orf42Q6IC83 251 aa18.21■□□□□ 0.51
TRIM4-202ENST00000354241 CHMP1BQ7LBR1 199 aa18.21■□□□□ 0.51
TRIM4-202ENST00000354241 KCTD20Q7Z5Y7 419 aa18.21■□□□□ 0.51
TRIM4-202ENST00000354241 LINC00346Q8IVM7 164 aa18.21■□□□□ 0.51
TRIM4-202ENST00000354241 ASB17Q8WXJ9 295 aa18.21■□□□□ 0.51
TRIM4-202ENST00000354241 TTYH2Q9BSA4 534 aa18.21■□□□□ 0.51
TRIM4-202ENST00000354241 CDADC1Q9BWV3 514 aa18.21■□□□□ 0.51
TRIM4-202ENST00000354241 HDHD5Q9BXW7 423 aa18.21■□□□□ 0.51
TRIM4-202ENST00000354241 PRRG4Q9BZD6 226 aa18.21■□□□□ 0.51
TRIM4-202ENST00000354241 APC2O95996 2303 aa18.21■□□□□ 0.51
TRIM4-202ENST00000354241 HRGP04196 525 aa18.21■□□□□ 0.51
TRIM4-202ENST00000354241 CDAP32320 146 aa18.21■□□□□ 0.51
TRIM4-202ENST00000354241 PEX19P40855 299 aa18.21■□□□□ 0.51
TRIM4-202ENST00000354241 AAED1Q7RTV5 226 aa18.21■□□□□ 0.51
TRIM4-202ENST00000354241 ZNF454Q8N9F8 522 aa18.21■□□□□ 0.51
TRIM4-202ENST00000354241 SLCO1C1Q9NYB5 712 aa18.21■□□□□ 0.51
TRIM4-202ENST00000354241 DKK4Q9UBT3 224 aa18.21■□□□□ 0.51
TRIM4-202ENST00000354241 CAMK2AQ9UQM7 478 aa18.21■□□□□ 0.51
TRIM4-202ENST00000354241 RCE1Q9Y256 329 aa18.21■□□□□ 0.51
TRIM4-202ENST00000354241 MKRN2OSH3BPM6 223 aa18.2■□□□□ 0.5
TRIM4-202ENST00000354241 SULT1C4O75897 302 aa18.2■□□□□ 0.5
TRIM4-202ENST00000354241 HLA-DPB1P04440 258 aa18.2■□□□□ 0.5
TRIM4-202ENST00000354241 TUBA1BP68363 451 aa18.2■□□□□ 0.5
TRIM4-202ENST00000354241 CDK5R1Q15078 307 aa18.2■□□□□ 0.5
TRIM4-202ENST00000354241 DGUOKQ16854 277 aa18.2■□□□□ 0.5
TRIM4-202ENST00000354241 DMKNQ6E0U4 476 aaPredicted RBP18.2■□□□□ 0.5
TRIM4-202ENST00000354241 TUBA1AQ71U36 451 aa18.2■□□□□ 0.5
TRIM4-202ENST00000354241 SPATC1Q76KD6 591 aa18.2■□□□□ 0.5
TRIM4-202ENST00000354241 WDYHV1Q96HA8 205 aa18.2■□□□□ 0.5
TRIM4-202ENST00000354241 ABHD6Q9BV23 337 aa18.2■□□□□ 0.5
TRIM4-202ENST00000354241 PHF3Q92576 2039 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms