RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 TFP02787 698 aa17.75■□□□□ 0.43
SIGMAR1-202ENST00000353468 ATP6V1B1P15313 513 aa17.75■□□□□ 0.43
SIGMAR1-202ENST00000353468 OR3A2P47893 321 aa17.75■□□□□ 0.43
SIGMAR1-202ENST00000353468 FOXF2Q12947 444 aa17.75■□□□□ 0.43
SIGMAR1-202ENST00000353468 LINGO2Q7L985 606 aa17.75■□□□□ 0.43
SIGMAR1-202ENST00000353468 SPARTQ8N0X7 666 aa17.75■□□□□ 0.43
SIGMAR1-202ENST00000353468 CNEP1R1Q8N9A8 125 aa17.75■□□□□ 0.43
SIGMAR1-202ENST00000353468 SLC26A10Q8NG04 563 aa17.75■□□□□ 0.43
SIGMAR1-202ENST00000353468 ZFP3Q96NJ6 502 aa17.75■□□□□ 0.43
SIGMAR1-202ENST00000353468 SEC61A2Q9H9S3 476 aa17.75■□□□□ 0.43
SIGMAR1-202ENST00000353468 MRPL22Q9NWU5 206 aaKnown RBP17.75■□□□□ 0.43
SIGMAR1-202ENST00000353468 UPB1Q9UBR1 384 aa17.75■□□□□ 0.43
SIGMAR1-202ENST00000353468 SCOCQ9UIL1 159 aa17.75■□□□□ 0.43
SIGMAR1-202ENST00000353468 SHANK1Q9Y566 2161 aa17.75■□□□□ 0.43
SIGMAR1-202ENST00000353468 PHF3Q92576 2039 aaKnown RBP17.75■□□□□ 0.43
SIGMAR1-202ENST00000353468 CRHP06850 196 aa17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 TMIGD3P0DMS9 266 aaPredicted RBP17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 GLI4P10075 376 aa17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 GAAP10253 952 aa17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 CEACAM8P31997 349 aaPredicted RBP17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 ZNF84P51523 738 aa17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 EIF2S3LQ2VIR3 472 aaKnown RBP17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 SLC16A9Q7RTY1 509 aa17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 OR6K3Q8NGY3 331 aa17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 SMAP2Q8WU79 429 aaPredicted RBP17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 ZNF837Q96EG3 531 aaPredicted RBP17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 INTS14Q96SY0 518 aa17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 MRPS26Q9BYN8 205 aaKnown RBP17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 WDR76Q9H967 626 aa17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 GPR35Q9HC97 309 aa17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 PRSS50Q9UI38 385 aa17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 SH3BGRL2Q9UJC5 107 aa17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 UGT2A1Q9Y4X1 527 aa17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 USP24Q9UPU5 2620 aa17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 FREM1Q5H8C1 2179 aa17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 TRIM64CA6NLI5 447 aa17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 C12orf71A8MTZ7 269 aa17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 IGHA1P01876 353 aa17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 HRGP04196 525 aa17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 CDAP32320 146 aa17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 GUCA1AP43080 201 aaPredicted RBP17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 TUBA4AP68366 448 aa17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 ROR2Q01974 943 aaKnown RBP17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 OTPQ5XKR4 325 aa17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 TMEM154Q6P9G4 183 aa17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 VWA1Q6PCB0 445 aa17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 SLC35F2Q8IXU6 374 aa17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 UBE2J2Q8N2K1 259 aa17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 ACBD7Q8N6N7 88 aa17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 OR10H4Q8NGA5 316 aa17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 OR6N2Q8NGY6 317 aa17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 C11orf40Q8WZ69 217 aa17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 CDCA4Q9BXL8 241 aa17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 EXOSC1Q9Y3B2 195 aaKnown RBP17.74■□□□□ 0.43
SIGMAR1-202ENST00000353468 ZNF593O00488 134 aaPredicted RBP17.73■□□□□ 0.43
SIGMAR1-202ENST00000353468 SCG5P05408 212 aa17.73■□□□□ 0.43
SIGMAR1-202ENST00000353468 OR2T7P0C7T2 308 aa17.73■□□□□ 0.43
SIGMAR1-202ENST00000353468 ZNF823P16415 610 aa17.73■□□□□ 0.43
SIGMAR1-202ENST00000353468 MYL12AP19105 171 aa17.73■□□□□ 0.43
SIGMAR1-202ENST00000353468 HCCSP53701 268 aa17.73■□□□□ 0.43
SIGMAR1-202ENST00000353468 CASP6P55212 293 aa17.73■□□□□ 0.43
SIGMAR1-202ENST00000353468 ADAM8P78325 824 aa17.73■□□□□ 0.43
SIGMAR1-202ENST00000353468 IRF3Q14653 427 aa17.73■□□□□ 0.43
SIGMAR1-202ENST00000353468 MEP1BQ16820 701 aa17.73■□□□□ 0.43
SIGMAR1-202ENST00000353468 CEACAM16Q2WEN9 425 aa17.73■□□□□ 0.43
SIGMAR1-202ENST00000353468 RNLSQ5VYX0 342 aa17.73■□□□□ 0.43
SIGMAR1-202ENST00000353468 FOXL2NBQ6ZUU3 175 aa17.73■□□□□ 0.43
SIGMAR1-202ENST00000353468 SVOPQ8N4V2 548 aa17.73■□□□□ 0.43
SIGMAR1-202ENST00000353468 NAXEQ8NCW5 288 aa17.73■□□□□ 0.43
SIGMAR1-202ENST00000353468 OR2T27Q8NH04 317 aa17.73■□□□□ 0.43
SIGMAR1-202ENST00000353468 TBX5Q99593 518 aa17.73■□□□□ 0.43
SIGMAR1-202ENST00000353468 JAM3Q9BX67 310 aa17.73■□□□□ 0.43
SIGMAR1-202ENST00000353468 CHCHD3Q9NX63 227 aaKnown RBP17.73■□□□□ 0.43
SIGMAR1-202ENST00000353468 TAS2R16Q9NYV7 291 aa17.73■□□□□ 0.43
SIGMAR1-202ENST00000353468 ITPR1Q14643 2758 aa17.72■□□□□ 0.43
SIGMAR1-202ENST00000353468 ZNF587BE7ETH6 402 aa17.72■□□□□ 0.43
SIGMAR1-202ENST00000353468 RPL36A-HNRNPH2H7BZ11 118 aa17.72■□□□□ 0.43
SIGMAR1-202ENST00000353468 TNFSF13O75888 250 aa17.72■□□□□ 0.43
SIGMAR1-202ENST00000353468 ENTPD1P49961 510 aa17.72■□□□□ 0.43
SIGMAR1-202ENST00000353468 ACTC1P68032 377 aa17.72■□□□□ 0.43
SIGMAR1-202ENST00000353468 ACTA1P68133 377 aa17.72■□□□□ 0.43
SIGMAR1-202ENST00000353468 PMPCAQ10713 525 aa17.72■□□□□ 0.43
SIGMAR1-202ENST00000353468 FAPQ12884 760 aa17.72■□□□□ 0.43
SIGMAR1-202ENST00000353468 STK11Q15831 433 aa17.72■□□□□ 0.43
SIGMAR1-202ENST00000353468 FBXW9Q5XUX1 488 aa17.72■□□□□ 0.43
SIGMAR1-202ENST00000353468 TFAP2EQ6VUC0 442 aa17.72■□□□□ 0.43
SIGMAR1-202ENST00000353468 BTLAQ7Z6A9 289 aa17.72■□□□□ 0.43
SIGMAR1-202ENST00000353468 LHFPL3Q86UP9 236 aa17.72■□□□□ 0.43
SIGMAR1-202ENST00000353468 YIPF3Q9GZM5 350 aa17.72■□□□□ 0.43
SIGMAR1-202ENST00000353468 POLE4Q9NR33 117 aa17.72■□□□□ 0.43
SIGMAR1-202ENST00000353468 PLSCR4Q9NRQ2 329 aa17.72■□□□□ 0.43
SIGMAR1-202ENST00000353468 INPP5EQ9NRR6 644 aa17.72■□□□□ 0.43
SIGMAR1-202ENST00000353468 CLEC2DQ9UHP7 191 aa17.72■□□□□ 0.43
SIGMAR1-202ENST00000353468 TRGV8A0A0C4DH27 118 aa17.71■□□□□ 0.43
SIGMAR1-202ENST00000353468 DAPL1A0PJW8 107 aa17.71■□□□□ 0.43
SIGMAR1-202ENST00000353468 CLPTM1O96005 669 aa17.71■□□□□ 0.43
SIGMAR1-202ENST00000353468 MAP2K4P45985 399 aa17.71■□□□□ 0.43
SIGMAR1-202ENST00000353468 ETV1P50549 477 aa17.71■□□□□ 0.43
SIGMAR1-202ENST00000353468 EMX1Q04741 257 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms