RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 DHODHQ02127 395 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 ELAVL1Q15717 326 aaKnown RBP7.77□□□□□ -1.17
TRIM55-204ENST00000353317 TMEM69Q5SWH9 247 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 LINC00114Q6XXX2 140 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 C3P1Q6ZMU1 363 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 HDDC2Q7Z4H3 204 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 ANKRD37Q7Z713 158 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 OR6V1Q8N148 313 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 SPICQ8N5J4 248 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 APCDD1LQ8NCL9 501 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 NPEPL1Q8NDH3 523 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 NFAM1Q8NET5 270 aaPredicted RBP7.77□□□□□ -1.17
TRIM55-204ENST00000353317 OR6K6Q8NGW6 343 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 MOSPD2Q8NHP6 518 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 SYNPRQ8TBG9 265 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 OR5V1Q9UGF6 321 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 KIF25Q9UIL4 384 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 FOXJ3Q9UPW0 622 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 KCNMB2Q9Y691 235 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 MED13Q9UHV7 2174 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 AKAP13Q12802 2813 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 ANKRD61A6NGH8 418 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 TMEM200CA6NKL6 621 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 FAM171A2A8MVW0 826 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 OIP5O43482 229 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 GPRIN2O60269 458 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 ITGA10O75578 1167 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 AK1P00568 194 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 HOXD4P09016 255 aaPredicted RBP7.76□□□□□ -1.17
TRIM55-204ENST00000353317 SPI1P17947 270 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 POU3F2P20265 443 aaPredicted RBP7.76□□□□□ -1.17
TRIM55-204ENST00000353317 CDK2P24941 298 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 RBM34P42696 430 aaKnown RBP7.76□□□□□ -1.17
TRIM55-204ENST00000353317 IL11RAQ14626 422 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 SFRP5Q5T4F7 317 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 OR5M10Q6IEU7 315 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 KIRREL2Q6UWL6 708 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 DHRS13Q6UX07 377 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 NHLRC1Q6VVB1 395 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 TIPARPQ7Z3E1 657 aaKnown RBP7.76□□□□□ -1.17
TRIM55-204ENST00000353317 CPAMD8Q8IZJ3 1885 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 MEIOBQ8N635 442 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 RPS4Y2Q8TD47 263 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 THEM6Q8WUY1 208 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 PHYHIPQ92561 330 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 S100A16Q96FQ6 103 aaKnown RBP7.76□□□□□ -1.17
TRIM55-204ENST00000353317 LINC00052Q96N35 136 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 LRFN3Q9BTN0 628 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 REG4Q9BYZ8 158 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 TMEM9BQ9NQ34 198 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 TAS2R10Q9NYW0 307 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 FBXL3Q9UKT7 428 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 ZNF346Q9UL40 294 aaKnown RBP7.76□□□□□ -1.17
TRIM55-204ENST00000353317 ZNF281Q9Y2X9 895 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 V9GY05 133 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 hCG_1807616A0A1W2PRN6 198 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 MCRIP1C9JLW8 97 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 TRIM77I1YAP6 450 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 L7N2F9 121 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 CREBL2O60519 120 aaPredicted RBP7.76□□□□□ -1.17
TRIM55-204ENST00000353317 KLF7O75840 302 aaPredicted RBP7.76□□□□□ -1.17
TRIM55-204ENST00000353317 OR2A4O95047 310 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 GIPP09681 153 aaPredicted RBP7.76□□□□□ -1.17
TRIM55-204ENST00000353317 TMIGD3P0DMS9 266 aaPredicted RBP7.76□□□□□ -1.17
TRIM55-204ENST00000353317 NFYAP23511 347 aaPredicted RBP7.76□□□□□ -1.17
TRIM55-204ENST00000353317 PTGS2P35354 604 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 RPL4P36578 427 aaKnown RBP7.76□□□□□ -1.17
TRIM55-204ENST00000353317 PSMA6P60900 246 aaKnown RBP7.76□□□□□ -1.17
TRIM55-204ENST00000353317 TRA2AQ13595 282 aaKnown RBP eCLIP7.76□□□□□ -1.17
TRIM55-204ENST00000353317 EBPQ15125 230 aaKnown RBP7.76□□□□□ -1.17
TRIM55-204ENST00000353317 OLFML2AQ68BL7 652 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 ZNF626Q68DY1 528 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 FAM198BQ6UWH4 519 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 GRAMD2AQ8IUY3 354 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 SLC43A2Q8N370 569 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 OR52B4Q8NGK2 314 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 THAP3Q8WTV1 239 aaPredicted RBP7.76□□□□□ -1.17
TRIM55-204ENST00000353317 RASD2Q96D21 266 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 HAVCR1Q96D42 359 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 KLHL15Q96M94 604 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 LRFN5Q96NI6 719 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 OR2A7Q96R45 310 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 GAL3ST4Q96RP7 486 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 ULBP3Q9BZM4 244 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 TRIM2Q9C040 744 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 SDHAF2Q9NX18 166 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 SLC39A1Q9NY26 324 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 TAS2R5Q9NYW4 299 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 RABL2AQ9UBK7 228 aaPredicted RBP7.76□□□□□ -1.17
TRIM55-204ENST00000353317 RABL2BQ9UNT1 228 aa7.76□□□□□ -1.17
TRIM55-204ENST00000353317 OR2M5A3KFT3 312 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 TUBAL3A6NHL2 446 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 PDCD5O14737 125 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 UMODP07911 640 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 CELA2AP08217 269 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 ADRA2CP18825 462 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 CCKBRP32239 447 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 CD226Q15762 336 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 CSRP2Q16527 193 aa7.75□□□□□ -1.17
TRIM55-204ENST00000353317 ISXQ2M1V0 245 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 407 ms