RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 BBS10Q8TAM1 723 aa13.19□□□□□ -0.3
COPE-202ENST00000349893 KLF14Q8TD94 323 aaPredicted RBP13.19□□□□□ -0.3
COPE-202ENST00000349893 UBE2FQ969M7 185 aa13.19□□□□□ -0.3
COPE-202ENST00000349893 VPS33AQ96AX1 596 aa13.19□□□□□ -0.3
COPE-202ENST00000349893 POM121L2Q96KW2 1035 aa13.19□□□□□ -0.3
COPE-202ENST00000349893 SIGLEC11Q96RL6 698 aa13.19□□□□□ -0.3
COPE-202ENST00000349893 SORT1Q99523 831 aa13.19□□□□□ -0.3
COPE-202ENST00000349893 LGALS13Q9UHV8 139 aa13.19□□□□□ -0.3
COPE-202ENST00000349893 IGHV3OR16-10A0A075B7F0 116 aa13.18□□□□□ -0.3
COPE-202ENST00000349893 TMEM247A6NEH6 219 aa13.18□□□□□ -0.3
COPE-202ENST00000349893 TYROBPO43914 113 aa13.18□□□□□ -0.3
COPE-202ENST00000349893 SERPINI2O75830 405 aa13.18□□□□□ -0.3
COPE-202ENST00000349893 CLPXO76031 633 aa13.18□□□□□ -0.3
COPE-202ENST00000349893 SERPINE1P05121 402 aa13.18□□□□□ -0.3
COPE-202ENST00000349893 ADORA3P0DMS8 318 aa13.18□□□□□ -0.3
COPE-202ENST00000349893 APLNRP35414 380 aa13.18□□□□□ -0.3
COPE-202ENST00000349893 ABCE1P61221 599 aaKnown RBP13.18□□□□□ -0.3
COPE-202ENST00000349893 CDK5R2Q13319 367 aa13.18□□□□□ -0.3
COPE-202ENST00000349893 HLXQ14774 488 aaPredicted RBP13.18□□□□□ -0.3
COPE-202ENST00000349893 ZMYND11Q15326 602 aa13.18□□□□□ -0.3
COPE-202ENST00000349893 TAF9Q16594 264 aa13.18□□□□□ -0.3
COPE-202ENST00000349893 DEFB112Q30KQ8 113 aa13.18□□□□□ -0.3
COPE-202ENST00000349893 ESCO2Q56NI9 601 aa13.18□□□□□ -0.3
COPE-202ENST00000349893 SPATA46Q5T0L3 261 aa13.18□□□□□ -0.3
COPE-202ENST00000349893 SWT1Q5T5J6 900 aaKnown RBP13.18□□□□□ -0.3
COPE-202ENST00000349893 ZNF774Q6NX45 483 aa13.18□□□□□ -0.3
COPE-202ENST00000349893 DHRS4L2Q6PKH6 230 aa13.18□□□□□ -0.3
COPE-202ENST00000349893 C1QL4Q86Z23 238 aa13.18□□□□□ -0.3
COPE-202ENST00000349893 KIRREL3Q8IZU9 778 aa13.18□□□□□ -0.3
COPE-202ENST00000349893 SLC25A40Q8TBP6 338 aa13.18□□□□□ -0.3
COPE-202ENST00000349893 SEPHS2Q99611 448 aa13.18□□□□□ -0.3
COPE-202ENST00000349893 NUF2Q9BZD4 464 aa13.18□□□□□ -0.3
COPE-202ENST00000349893 NOX4Q9NPH5 578 aa13.18□□□□□ -0.3
COPE-202ENST00000349893 TAS2R5Q9NYW4 299 aa13.18□□□□□ -0.3
COPE-202ENST00000349893 TRAV40A0A0B4J280 105 aa13.17□□□□□ -0.3
COPE-202ENST00000349893 IGHV2-70DA0A0C4DH43 119 aa13.17□□□□□ -0.3
COPE-202ENST00000349893 IL6P05231 212 aa13.17□□□□□ -0.3
COPE-202ENST00000349893 CRYBA1P05813 215 aa13.17□□□□□ -0.3
COPE-202ENST00000349893 QDPRP09417 244 aa13.17□□□□□ -0.3
COPE-202ENST00000349893 NUDT7P0C024 238 aa13.17□□□□□ -0.3
COPE-202ENST00000349893 STOMP27105 288 aa13.17□□□□□ -0.3
COPE-202ENST00000349893 ZNF133P52736 654 aaPredicted RBP13.17□□□□□ -0.3
COPE-202ENST00000349893 BPIFB3P59826 476 aa13.17□□□□□ -0.3
COPE-202ENST00000349893 PDCD1Q15116 288 aa13.17□□□□□ -0.3
COPE-202ENST00000349893 RGNQ15493 299 aa13.17□□□□□ -0.3
COPE-202ENST00000349893 GTDC1Q4AE62 458 aa13.17□□□□□ -0.3
COPE-202ENST00000349893 PABPC1L2AQ5JQF8 200 aa13.17□□□□□ -0.3
COPE-202ENST00000349893 FIP1L1Q6UN15 594 aaKnown RBP13.17□□□□□ -0.3
COPE-202ENST00000349893 UNQ6126/PRO20091Q6UXV3 157 aa13.17□□□□□ -0.3
COPE-202ENST00000349893 LINC00114Q6XXX2 140 aa13.17□□□□□ -0.3
COPE-202ENST00000349893 Q6YL49 198 aa13.17□□□□□ -0.3
COPE-202ENST00000349893 NUDCD3Q8IVD9 361 aa13.17□□□□□ -0.3
COPE-202ENST00000349893 POU5F2Q8N7G0 328 aa13.17□□□□□ -0.3
COPE-202ENST00000349893 MAL2Q969L2 176 aa13.17□□□□□ -0.3
COPE-202ENST00000349893 SAMD8Q96LT4 415 aa13.17□□□□□ -0.3
COPE-202ENST00000349893 DCLRE1CQ96SD1 692 aaKnown RBP13.17□□□□□ -0.3
COPE-202ENST00000349893 ARHGDIGQ99819 225 aa13.17□□□□□ -0.3
COPE-202ENST00000349893 CHIAQ9BZP6 476 aa13.17□□□□□ -0.3
COPE-202ENST00000349893 SLC19A3Q9BZV2 496 aa13.17□□□□□ -0.3
COPE-202ENST00000349893 OR2J1Q9GZK6 312 aa13.17□□□□□ -0.3
COPE-202ENST00000349893 LOC100509620A0A075B734 347 aa13.16□□□□□ -0.3
COPE-202ENST00000349893 C11orf98E9PRG8 122 aa13.16□□□□□ -0.3
COPE-202ENST00000349893 TPST2O60704 377 aa13.16□□□□□ -0.3
COPE-202ENST00000349893 TSPAN15O95858 294 aa13.16□□□□□ -0.3
COPE-202ENST00000349893 WNT2P09544 360 aa13.16□□□□□ -0.3
COPE-202ENST00000349893 MDH2P40926 338 aaKnown RBP13.16□□□□□ -0.3
COPE-202ENST00000349893 PROK1P58294 105 aa13.16□□□□□ -0.3
COPE-202ENST00000349893 TNFAIP6P98066 277 aaPredicted RBP13.16□□□□□ -0.3
COPE-202ENST00000349893 FADDQ13158 208 aa13.16□□□□□ -0.3
COPE-202ENST00000349893 OR1Q1Q15612 314 aa13.16□□□□□ -0.3
COPE-202ENST00000349893 KPRPQ5T749 579 aaPredicted RBP13.16□□□□□ -0.3
COPE-202ENST00000349893 BTNL3Q6UXE8 466 aa13.16□□□□□ -0.3
COPE-202ENST00000349893 MSANTD1Q6ZTZ1 278 aa13.16□□□□□ -0.3
COPE-202ENST00000349893 OR10S1Q8NGN2 331 aa13.16□□□□□ -0.3
COPE-202ENST00000349893 MCHR2Q969V1 340 aa13.16□□□□□ -0.3
COPE-202ENST00000349893 ZBTB18Q99592 522 aa13.16□□□□□ -0.3
COPE-202ENST00000349893 SSBP3Q9BWW4 388 aaPredicted RBP13.16□□□□□ -0.3
COPE-202ENST00000349893 MRPL13Q9BYD1 178 aaKnown RBP13.16□□□□□ -0.3
COPE-202ENST00000349893 MSL2Q9HCI7 577 aa13.16□□□□□ -0.3
COPE-202ENST00000349893 SELENONQ9NZV5 590 aa13.16□□□□□ -0.3
COPE-202ENST00000349893 RNF114Q9Y508 228 aa13.16□□□□□ -0.3
COPE-202ENST00000349893 POMT1Q9Y6A1 747 aa13.16□□□□□ -0.3
COPE-202ENST00000349893 TLDC2A0PJX2 215 aa13.15□□□□□ -0.3
COPE-202ENST00000349893 CEACAM18A8MTB9 384 aa13.15□□□□□ -0.3
COPE-202ENST00000349893 CENPBD1B2RD01 187 aa13.15□□□□□ -0.3
COPE-202ENST00000349893 SDHDO14521 159 aa13.15□□□□□ -0.3
COPE-202ENST00000349893 TPST1O60507 370 aa13.15□□□□□ -0.3
COPE-202ENST00000349893 TGDSO95455 350 aa13.15□□□□□ -0.3
COPE-202ENST00000349893 IGHG1P01857 330 aa13.15□□□□□ -0.3
COPE-202ENST00000349893 TNFRSF1AP19438 455 aa13.15□□□□□ -0.3
COPE-202ENST00000349893 RBMXP38159 391 aaKnown RBP13.15□□□□□ -0.3
COPE-202ENST00000349893 CDH12P55289 794 aa13.15□□□□□ -0.3
COPE-202ENST00000349893 HSF2Q03933 536 aa13.15□□□□□ -0.3
COPE-202ENST00000349893 BEAN1Q3B7T3 259 aa13.15□□□□□ -0.3
COPE-202ENST00000349893 MTX3Q5HYI7 312 aa13.15□□□□□ -0.3
COPE-202ENST00000349893 C10orf128Q5T292 105 aa13.15□□□□□ -0.3
COPE-202ENST00000349893 RFPL4BQ6ZWI9 263 aa13.15□□□□□ -0.3
COPE-202ENST00000349893 MUC20Q8N307 709 aaPredicted RBP13.15□□□□□ -0.3
COPE-202ENST00000349893 C10orf53Q8N6V4 93 aa13.15□□□□□ -0.3
COPE-202ENST00000349893 LINC01006Q8NI28 216 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms