RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 PSMB1P20618 241 aaKnown RBP13.87□□□□□ -0.19
UPF3B-202ENST00000345865 VEGFCP49767 419 aa13.87□□□□□ -0.19
UPF3B-202ENST00000345865 SLC26A5P58743 744 aa13.87□□□□□ -0.19
UPF3B-202ENST00000345865 ROM1Q03395 351 aa13.87□□□□□ -0.19
UPF3B-202ENST00000345865 FMODQ06828 376 aa13.87□□□□□ -0.19
UPF3B-202ENST00000345865 PTCRAQ6ISU1 281 aaPredicted RBP13.87□□□□□ -0.19
UPF3B-202ENST00000345865 SLC18B1Q6NT16 456 aa13.87□□□□□ -0.19
UPF3B-202ENST00000345865 PIAS4Q8N2W9 510 aaPredicted RBP13.87□□□□□ -0.19
UPF3B-202ENST00000345865 OR51D1Q8NGF3 324 aa13.87□□□□□ -0.19
UPF3B-202ENST00000345865 GRPEL2Q8TAA5 225 aa13.87□□□□□ -0.19
UPF3B-202ENST00000345865 TSEN15Q8WW01 171 aaKnown RBP13.87□□□□□ -0.19
UPF3B-202ENST00000345865 SNAPC3Q92966 411 aa13.87□□□□□ -0.19
UPF3B-202ENST00000345865 OR6C1Q96RD1 312 aa13.87□□□□□ -0.19
UPF3B-202ENST00000345865 WDR77Q9BQA1 342 aaPredicted RBP13.87□□□□□ -0.19
UPF3B-202ENST00000345865 OR10A4Q9H209 315 aa13.87□□□□□ -0.19
UPF3B-202ENST00000345865 STEAP1Q9UHE8 339 aa13.87□□□□□ -0.19
UPF3B-202ENST00000345865 SLC23A1Q9UHI7 598 aa13.87□□□□□ -0.19
UPF3B-202ENST00000345865 MGAT4AQ9UM21 535 aa13.87□□□□□ -0.19
UPF3B-202ENST00000345865 GTF2A1LQ9UNN4 478 aa13.87□□□□□ -0.19
UPF3B-202ENST00000345865 VDAC3Q9Y277 283 aa13.87□□□□□ -0.19
UPF3B-202ENST00000345865 IGKV1D-43A0A0B4J1Z2 117 aa13.86□□□□□ -0.19
UPF3B-202ENST00000345865 LY6G6EA0A0G2JKS1 128 aa13.86□□□□□ -0.19
UPF3B-202ENST00000345865 A0A1W2PQM1 296 aa13.86□□□□□ -0.19
UPF3B-202ENST00000345865 HSPB2A8KAH6 182 aa13.86□□□□□ -0.19
UPF3B-202ENST00000345865 DOK2O60496 412 aa13.86□□□□□ -0.19
UPF3B-202ENST00000345865 PEX14O75381 377 aa13.86□□□□□ -0.19
UPF3B-202ENST00000345865 KHDRBS3O75525 346 aaKnown RBP13.86□□□□□ -0.19
UPF3B-202ENST00000345865 GLSO94925 669 aaPredicted RBP13.86□□□□□ -0.19
UPF3B-202ENST00000345865 ANXA3P12429 323 aa13.86□□□□□ -0.19
UPF3B-202ENST00000345865 HTR2BP41595 481 aa13.86□□□□□ -0.19
UPF3B-202ENST00000345865 HSPB2Q16082 182 aa13.86□□□□□ -0.19
UPF3B-202ENST00000345865 NKAIN1Q4KMZ8 207 aa13.86□□□□□ -0.19
UPF3B-202ENST00000345865 WDR45BQ5MNZ6 344 aa13.86□□□□□ -0.19
UPF3B-202ENST00000345865 LYPD8Q6UX82 237 aa13.86□□□□□ -0.19
UPF3B-202ENST00000345865 DNM1P46Q6ZS02 220 aa13.86□□□□□ -0.19
UPF3B-202ENST00000345865 Q6ZTK2 550 aa13.86□□□□□ -0.19
UPF3B-202ENST00000345865 CLDN23Q96B33 292 aa13.86□□□□□ -0.19
UPF3B-202ENST00000345865 NXPE2Q96DL1 559 aa13.86□□□□□ -0.19
UPF3B-202ENST00000345865 SHDQ96IW2 340 aa13.86□□□□□ -0.19
UPF3B-202ENST00000345865 FSCN3Q9NQT6 498 aa13.86□□□□□ -0.19
UPF3B-202ENST00000345865 ZNF275Q9NSD4 429 aaPredicted RBP13.86□□□□□ -0.19
UPF3B-202ENST00000345865 SRPK3Q9UPE1 567 aa13.86□□□□□ -0.19
UPF3B-202ENST00000345865 U3KQA8 63 aa13.86□□□□□ -0.19
UPF3B-202ENST00000345865 CPED1A4D0V7 1026 aa13.86□□□□□ -0.19
UPF3B-202ENST00000345865 OR2T1O43869 369 aa13.86□□□□□ -0.19
UPF3B-202ENST00000345865 ECDO95905 644 aaPredicted RBP13.86□□□□□ -0.19
UPF3B-202ENST00000345865 HEXBP07686 556 aa13.86□□□□□ -0.19
UPF3B-202ENST00000345865 MNDAP41218 407 aa13.86□□□□□ -0.19
UPF3B-202ENST00000345865 CXCL12P48061 93 aa13.86□□□□□ -0.19
UPF3B-202ENST00000345865 PUDPQ08623 228 aa13.86□□□□□ -0.19
UPF3B-202ENST00000345865 EIF2B1Q14232 305 aaKnown RBP13.86□□□□□ -0.19
UPF3B-202ENST00000345865 TSSK4Q6SA08 328 aa13.86□□□□□ -0.19
UPF3B-202ENST00000345865 ASB17Q8WXJ9 295 aa13.86□□□□□ -0.19
UPF3B-202ENST00000345865 HGDQ93099 445 aa13.86□□□□□ -0.19
UPF3B-202ENST00000345865 DACT3Q96B18 629 aaPredicted RBP13.86□□□□□ -0.19
UPF3B-202ENST00000345865 ACTR6Q9GZN1 396 aa13.86□□□□□ -0.19
UPF3B-202ENST00000345865 STMN3Q9NZ72 180 aa13.86□□□□□ -0.19
UPF3B-202ENST00000345865 AKAP7Q9P0M2 348 aaPredicted RBP13.86□□□□□ -0.19
UPF3B-202ENST00000345865 FBXL3Q9UKT7 428 aa13.86□□□□□ -0.19
UPF3B-202ENST00000345865 LRP12Q9Y561 859 aa13.86□□□□□ -0.19
UPF3B-202ENST00000345865 RALGAPA1Q6GYQ0 2036 aa13.85□□□□□ -0.19
UPF3B-202ENST00000345865 MEIKINA0A087WXM9 373 aa13.85□□□□□ -0.19
UPF3B-202ENST00000345865 ANKUB1A6NFN9 424 aa13.85□□□□□ -0.19
UPF3B-202ENST00000345865 EFNA2O43921 213 aa13.85□□□□□ -0.19
UPF3B-202ENST00000345865 OR7A5Q15622 319 aa13.85□□□□□ -0.19
UPF3B-202ENST00000345865 LINC00303Q3SY05 128 aa13.85□□□□□ -0.19
UPF3B-202ENST00000345865 LCN10Q6JVE6 187 aa13.85□□□□□ -0.19
UPF3B-202ENST00000345865 SEZ6L2Q6UXD5 910 aa13.85□□□□□ -0.19
UPF3B-202ENST00000345865 CREB3L2Q70SY1 520 aa13.85□□□□□ -0.19
UPF3B-202ENST00000345865 KRT77Q7Z794 578 aa13.85□□□□□ -0.19
UPF3B-202ENST00000345865 EID2Q8N6I1 236 aa13.85□□□□□ -0.19
UPF3B-202ENST00000345865 ING4Q9UNL4 249 aa13.85□□□□□ -0.19
UPF3B-202ENST00000345865 WDFY4Q6ZS81 3184 aa13.85□□□□□ -0.19
UPF3B-202ENST00000345865 ACOT7O00154 380 aa13.85□□□□□ -0.19
UPF3B-202ENST00000345865 ARPC1BO15143 372 aaKnown RBP13.85□□□□□ -0.19
UPF3B-202ENST00000345865 XRCC3O43542 346 aa13.85□□□□□ -0.19
UPF3B-202ENST00000345865 ALOX12BO75342 701 aa13.85□□□□□ -0.19
UPF3B-202ENST00000345865 KDM4BO94953 1096 aa13.85□□□□□ -0.19
UPF3B-202ENST00000345865 ALX3O95076 343 aa13.85□□□□□ -0.19
UPF3B-202ENST00000345865 ALDOBP05062 364 aa13.85□□□□□ -0.19
UPF3B-202ENST00000345865 IFNGR1P15260 489 aa13.85□□□□□ -0.19
UPF3B-202ENST00000345865 POU3F4P49335 361 aa13.85□□□□□ -0.19
UPF3B-202ENST00000345865 SELENOPP49908 381 aa13.85□□□□□ -0.19
UPF3B-202ENST00000345865 C17orf67Q0P5P2 114 aa13.85□□□□□ -0.19
UPF3B-202ENST00000345865 CAMK2DQ13557 499 aa13.85□□□□□ -0.19
UPF3B-202ENST00000345865 ELFN2Q5R3F8 820 aa13.85□□□□□ -0.19
UPF3B-202ENST00000345865 OLFML2AQ68BL7 652 aa13.85□□□□□ -0.19
UPF3B-202ENST00000345865 PAPD4Q6PIY7 484 aaKnown RBP13.85□□□□□ -0.19
UPF3B-202ENST00000345865 NDUFAF7Q7L592 441 aa13.85□□□□□ -0.19
UPF3B-202ENST00000345865 FGD2Q7Z6J4 655 aa13.85□□□□□ -0.19
UPF3B-202ENST00000345865 RABEPKQ7Z6M1 372 aa13.85□□□□□ -0.19
UPF3B-202ENST00000345865 ZNF227Q86WZ6 799 aa13.85□□□□□ -0.19
UPF3B-202ENST00000345865 CATSPERDQ86XM0 798 aa13.85□□□□□ -0.19
UPF3B-202ENST00000345865 MISPQ8IVT2 679 aa13.85□□□□□ -0.19
UPF3B-202ENST00000345865 PLPP7Q8NBV4 271 aa13.85□□□□□ -0.19
UPF3B-202ENST00000345865 ZNF431Q8TF32 576 aaPredicted RBP13.85□□□□□ -0.19
UPF3B-202ENST00000345865 ASB5Q8WWX0 329 aa13.85□□□□□ -0.19
UPF3B-202ENST00000345865 ASB10Q8WXI3 467 aa13.85□□□□□ -0.19
UPF3B-202ENST00000345865 TMEM234Q8WY98 164 aa13.85□□□□□ -0.19
UPF3B-202ENST00000345865 PRO3102Q9H379 93 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms