RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 TAF11Q15544 211 aa12.42□□□□□ -0.42
HMGN3-202ENST00000344726 NRN1LQ496H8 165 aa12.42□□□□□ -0.42
HMGN3-202ENST00000344726 C6orf52Q5T4I8 152 aa12.42□□□□□ -0.42
HMGN3-202ENST00000344726 SLC16A14Q7RTX9 510 aa12.42□□□□□ -0.42
HMGN3-202ENST00000344726 LRP11Q86VZ4 500 aa12.42□□□□□ -0.42
HMGN3-202ENST00000344726 CYP4Z1Q86W10 505 aa12.42□□□□□ -0.42
HMGN3-202ENST00000344726 MRPL24Q96A35 216 aaKnown RBP12.42□□□□□ -0.42
HMGN3-202ENST00000344726 FAM46AQ96IP4 442 aaKnown RBP12.42□□□□□ -0.42
HMGN3-202ENST00000344726 DHRS1Q96LJ7 313 aa12.42□□□□□ -0.42
HMGN3-202ENST00000344726 CDRT15Q96T59 188 aa12.42□□□□□ -0.42
HMGN3-202ENST00000344726 FUZQ9BT04 418 aa12.42□□□□□ -0.42
HMGN3-202ENST00000344726 ALG12Q9BV10 488 aa12.42□□□□□ -0.42
HMGN3-202ENST00000344726 SMURF2Q9HAU4 748 aa12.42□□□□□ -0.42
HMGN3-202ENST00000344726 MYEF2Q9P2K5 600 aaKnown RBP12.42□□□□□ -0.42
HMGN3-202ENST00000344726 STX18Q9P2W9 335 aaKnown RBP12.42□□□□□ -0.42
HMGN3-202ENST00000344726 SAMD4AQ9UPU9 718 aaKnown RBP12.42□□□□□ -0.42
HMGN3-202ENST00000344726 ADAM18Q9Y3Q7 739 aa12.42□□□□□ -0.42
HMGN3-202ENST00000344726 CMAHPQ9Y471 501 aa12.42□□□□□ -0.42
HMGN3-202ENST00000344726 TLX2O43763 284 aaPredicted RBP12.41□□□□□ -0.42
HMGN3-202ENST00000344726 MGRN1O60291 552 aa12.41□□□□□ -0.42
HMGN3-202ENST00000344726 DCTN3O75935 186 aa12.41□□□□□ -0.42
HMGN3-202ENST00000344726 IGHV4-31P0DP07 118 aa12.41□□□□□ -0.42
HMGN3-202ENST00000344726 ZNF16P17020 682 aaPredicted RBP12.41□□□□□ -0.42
HMGN3-202ENST00000344726 GLRXP35754 106 aa12.41□□□□□ -0.42
HMGN3-202ENST00000344726 OMPP47874 163 aa12.41□□□□□ -0.42
HMGN3-202ENST00000344726 LIMS1P48059 325 aa12.41□□□□□ -0.42
HMGN3-202ENST00000344726 ERVK-25P63136 954 aa12.41□□□□□ -0.42
HMGN3-202ENST00000344726 ANKDD1AQ495B1 522 aa12.41□□□□□ -0.42
HMGN3-202ENST00000344726 SLC36A2Q495M3 483 aa12.41□□□□□ -0.42
HMGN3-202ENST00000344726 ZBED5Q49AG3 693 aa12.41□□□□□ -0.42
HMGN3-202ENST00000344726 SAMD4BQ5PRF9 694 aaKnown RBP12.41□□□□□ -0.42
HMGN3-202ENST00000344726 TMEM53Q6P2H8 277 aa12.41□□□□□ -0.42
HMGN3-202ENST00000344726 DEFB107AQ8IZN7 70 aa12.41□□□□□ -0.42
HMGN3-202ENST00000344726 FITM2Q8N6M3 262 aa12.41□□□□□ -0.42
HMGN3-202ENST00000344726 SLC30A7Q8NEW0 376 aa12.41□□□□□ -0.42
HMGN3-202ENST00000344726 CCT8L2Q96SF2 557 aa12.41□□□□□ -0.42
HMGN3-202ENST00000344726 RNF121Q9H920 327 aa12.41□□□□□ -0.42
HMGN3-202ENST00000344726 SIAEQ9HAT2 523 aa12.41□□□□□ -0.42
HMGN3-202ENST00000344726 MAGEL2Q9UJ55 1249 aa12.41□□□□□ -0.42
HMGN3-202ENST00000344726 FBXL3Q9UKT7 428 aa12.41□□□□□ -0.42
HMGN3-202ENST00000344726 FZR1Q9UM11 496 aa12.41□□□□□ -0.42
HMGN3-202ENST00000344726 FKBP7Q9Y680 259 aa12.41□□□□□ -0.42
HMGN3-202ENST00000344726 ATRQ13535 2644 aa12.41□□□□□ -0.42
HMGN3-202ENST00000344726 H7C1C5 153 aa12.4□□□□□ -0.42
HMGN3-202ENST00000344726 ARPC2O15144 300 aa12.4□□□□□ -0.42
HMGN3-202ENST00000344726 ENTPD5O75356 428 aa12.4□□□□□ -0.42
HMGN3-202ENST00000344726 PTP4A3O75365 173 aa12.4□□□□□ -0.42
HMGN3-202ENST00000344726 ADRA2AP08913 450 aa12.4□□□□□ -0.42
HMGN3-202ENST00000344726 CSF3P09919 207 aa12.4□□□□□ -0.42
HMGN3-202ENST00000344726 ZNF32P17041 273 aa12.4□□□□□ -0.42
HMGN3-202ENST00000344726 PDLIM4P50479 330 aa12.4□□□□□ -0.42
HMGN3-202ENST00000344726 FXYD6P3P58550 94 aa12.4□□□□□ -0.42
HMGN3-202ENST00000344726 LCN6P62502 163 aa12.4□□□□□ -0.42
HMGN3-202ENST00000344726 GALK2Q01415 458 aa12.4□□□□□ -0.42
HMGN3-202ENST00000344726 SGCAQ16586 387 aa12.4□□□□□ -0.42
HMGN3-202ENST00000344726 MESTQ5EB52 335 aa12.4□□□□□ -0.42
HMGN3-202ENST00000344726 FGD3Q5JSP0 725 aa12.4□□□□□ -0.42
HMGN3-202ENST00000344726 THEM4Q5T1C6 240 aa12.4□□□□□ -0.42
HMGN3-202ENST00000344726 GKAP1Q5VSY0 366 aaPredicted RBP12.4□□□□□ -0.42
HMGN3-202ENST00000344726 FOXL2NBQ6ZUU3 175 aa12.4□□□□□ -0.42
HMGN3-202ENST00000344726 FAM122BQ7Z309 247 aa12.4□□□□□ -0.42
HMGN3-202ENST00000344726 DPPA2Q7Z7J5 298 aa12.4□□□□□ -0.42
HMGN3-202ENST00000344726 ARIH2OSQ8N7S6 290 aa12.4□□□□□ -0.42
HMGN3-202ENST00000344726 CPEB3Q8NE35 698 aaKnown RBP12.4□□□□□ -0.42
HMGN3-202ENST00000344726 OR52J3Q8NH60 311 aa12.4□□□□□ -0.42
HMGN3-202ENST00000344726 PYURFQ96I23 114 aa12.4□□□□□ -0.42
HMGN3-202ENST00000344726 Q96M85 177 aa12.4□□□□□ -0.42
HMGN3-202ENST00000344726 FOXN4Q96NZ1 517 aa12.4□□□□□ -0.42
HMGN3-202ENST00000344726 GPA33Q99795 319 aa12.4□□□□□ -0.42
HMGN3-202ENST00000344726 SYT3Q9BQG1 590 aa12.4□□□□□ -0.42
HMGN3-202ENST00000344726 SLC7A8Q9UHI5 535 aa12.4□□□□□ -0.42
HMGN3-202ENST00000344726 SIGLEC7Q9Y286 467 aa12.4□□□□□ -0.42
HMGN3-202ENST00000344726 FAM32AQ9Y421 112 aaKnown RBP12.4□□□□□ -0.42
HMGN3-202ENST00000344726 SPEF1Q9Y4P9 236 aa12.4□□□□□ -0.42
HMGN3-202ENST00000344726 IGHV4-61A0A0C4DH41 118 aa12.39□□□□□ -0.43
HMGN3-202ENST00000344726 A6NIZ1 184 aa12.39□□□□□ -0.43
HMGN3-202ENST00000344726 A8MV72 311 aaPredicted RBP12.39□□□□□ -0.43
HMGN3-202ENST00000344726 VSTM5A8MXK1 200 aa12.39□□□□□ -0.43
HMGN3-202ENST00000344726 GMNNO75496 209 aa12.39□□□□□ -0.43
HMGN3-202ENST00000344726 SCG5P05408 212 aa12.39□□□□□ -0.43
HMGN3-202ENST00000344726 CD14P08571 375 aa12.39□□□□□ -0.43
HMGN3-202ENST00000344726 FAM157BP0CG42 384 aa12.39□□□□□ -0.43
HMGN3-202ENST00000344726 USF1P22415 310 aaPredicted RBP12.39□□□□□ -0.43
HMGN3-202ENST00000344726 APEX1P27695 318 aaKnown RBP12.39□□□□□ -0.43
HMGN3-202ENST00000344726 RPL4P36578 427 aaKnown RBP12.39□□□□□ -0.43
HMGN3-202ENST00000344726 ALDH3B1P43353 468 aa12.39□□□□□ -0.43
HMGN3-202ENST00000344726 NR4A2P43354 598 aa12.39□□□□□ -0.43
HMGN3-202ENST00000344726 EVX1P49640 407 aa12.39□□□□□ -0.43
HMGN3-202ENST00000344726 RAP1BP61224 184 aa12.39□□□□□ -0.43
HMGN3-202ENST00000344726 ERVS71-1P61550 626 aa12.39□□□□□ -0.43
HMGN3-202ENST00000344726 RAP1AP62834 184 aa12.39□□□□□ -0.43
HMGN3-202ENST00000344726 KRT72Q14CN4 511 aa12.39□□□□□ -0.43
HMGN3-202ENST00000344726 MAD2L1BPQ15013 274 aaPredicted RBP12.39□□□□□ -0.43
HMGN3-202ENST00000344726 PABPC1L2AQ5JQF8 200 aa12.39□□□□□ -0.43
HMGN3-202ENST00000344726 FAM27BQ5VT28 67 aa12.39□□□□□ -0.43
HMGN3-202ENST00000344726 FAM205BPQ63HN1 556 aa12.39□□□□□ -0.43
HMGN3-202ENST00000344726 RRM2BQ7LG56 351 aa12.39□□□□□ -0.43
HMGN3-202ENST00000344726 HIPK1Q86Z02 1210 aa12.39□□□□□ -0.43
HMGN3-202ENST00000344726 NSMCE2Q96MF7 247 aa12.39□□□□□ -0.43
HMGN3-202ENST00000344726 RBP7Q96R05 134 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms