RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 SLC2A11Q9BYW1 496 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 ULBP3Q9BZM4 244 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 IL25Q9H293 177 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 EVA1AQ9H8M9 152 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 AP5S1Q9NUS5 200 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 LAMP3Q9UQV4 416 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 SONP18583 2426 aaKnown RBP5.72□□□□□ -1.49
VCAN-203ENST00000343200 DOPEY1Q5JWR5 2465 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 LEUTXA8MZ59 168 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 ANHXE9PGG2 379 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 STBD1O95210 358 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 JUNBP17275 347 aaPredicted RBP5.72□□□□□ -1.49
VCAN-203ENST00000343200 EMP2P54851 167 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 SNRPGP62308 76 aaKnown RBP5.72□□□□□ -1.49
VCAN-203ENST00000343200 CATSPEREQ5SY80 951 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 MANEALQ5VSG8 457 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 CDC42EP5Q6NZY7 148 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 MOGAT1Q96PD6 335 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 SGPP1Q9BX95 441 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 PARP12Q9H0J9 701 aaKnown RBP5.72□□□□□ -1.49
VCAN-203ENST00000343200 SALL4Q9UJQ4 1053 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 USP21Q9UK80 565 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 TMEM2Q9UHN6 1383 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 A0A0B4J203 849 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 TISP43B9A030 160 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 PDE6DO43924 150 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 GLB1P16278 677 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 HRH2P25021 359 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 APEX1P27695 318 aaKnown RBP5.72□□□□□ -1.49
VCAN-203ENST00000343200 EMP3P54852 163 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 SNU13P55769 128 aaKnown RBP5.72□□□□□ -1.49
VCAN-203ENST00000343200 ZNF85Q03923 595 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 ILKQ13418 452 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 RAB32Q13637 225 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.72□□□□□ -1.49
VCAN-203ENST00000343200 C5orf46Q6UWT4 87 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 SLC35G3Q8N808 338 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 OR4S1Q8NGB4 309 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 OR52L2PQ8NGH6 319 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 RAB37Q96AX2 223 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 NPAS1Q99742 590 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 CLSTN3Q9BQT9 956 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 WDR61Q9GZS3 305 aaKnown RBP5.72□□□□□ -1.49
VCAN-203ENST00000343200 UQCR10Q9UDW1 63 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 ATF5Q9Y2D1 282 aaPredicted RBP5.72□□□□□ -1.49
VCAN-203ENST00000343200 IRAK2O43187 625 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 TGM5O43548 720 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 NFATC1O95644 943 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 PPP1R3DO95685 299 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 GGT5P36269 586 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 AGTR2P50052 363 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 PCBP4P57723 403 aaKnown RBP5.72□□□□□ -1.49
VCAN-203ENST00000343200 VEZF1Q14119 521 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 FAM109BQ6ICB4 259 aaPredicted RBP5.72□□□□□ -1.49
VCAN-203ENST00000343200 CDC20BQ86Y33 519 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 RGL4Q8IZJ4 473 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 CPA6Q8N4T0 437 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 OR5P2Q8WZ92 322 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 ZBTB45Q96K62 511 aaPredicted RBP5.72□□□□□ -1.49
VCAN-203ENST00000343200 OR5B2Q96R09 309 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 ZNF160Q9HCG1 818 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 MANBALQ9NQG1 85 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 RHBDD3Q9Y3P4 386 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 NEURL4Q96JN8 1562 aa5.72□□□□□ -1.49
VCAN-203ENST00000343200 ZNF816-ZNF321PA0A0X1KG74 233 aa5.71□□□□□ -1.49
VCAN-203ENST00000343200 DUXBA0A1W2PPF3 345 aa5.71□□□□□ -1.49
VCAN-203ENST00000343200 TMEM150BA6NC51 233 aa5.71□□□□□ -1.49
VCAN-203ENST00000343200 NDUFB2O95178 105 aa5.71□□□□□ -1.49
VCAN-203ENST00000343200 CNIH1O95406 144 aa5.71□□□□□ -1.49
VCAN-203ENST00000343200 GABRA3P34903 492 aa5.71□□□□□ -1.49
VCAN-203ENST00000343200 AHRP35869 848 aa5.71□□□□□ -1.49
VCAN-203ENST00000343200 TAS2R60P59551 318 aa5.71□□□□□ -1.49
VCAN-203ENST00000343200 KCNJ10P78508 379 aa5.71□□□□□ -1.49
VCAN-203ENST00000343200 DSC1Q08554 894 aa5.71□□□□□ -1.49
VCAN-203ENST00000343200 TMEM268Q5VZI3 342 aa5.71□□□□□ -1.49
VCAN-203ENST00000343200 TBPL2Q6SJ96 375 aa5.71□□□□□ -1.49
VCAN-203ENST00000343200 OR5AU1Q8NGC0 362 aa5.71□□□□□ -1.49
VCAN-203ENST00000343200 EMID1Q96A84 441 aaPredicted RBP5.71□□□□□ -1.49
VCAN-203ENST00000343200 ISCA1Q9BUE6 129 aa5.71□□□□□ -1.49
VCAN-203ENST00000343200 CD84Q9UIB8 345 aa5.71□□□□□ -1.49
VCAN-203ENST00000343200 SMAD6O43541 496 aaKnown RBP5.71□□□□□ -1.49
VCAN-203ENST00000343200 ABHD16AO95870 558 aa5.71□□□□□ -1.49
VCAN-203ENST00000343200 GCGP01275 180 aa5.71□□□□□ -1.49
VCAN-203ENST00000343200 UNGP13051 313 aaPredicted RBP5.71□□□□□ -1.49
VCAN-203ENST00000343200 CEBPDP49716 269 aaPredicted RBP5.71□□□□□ -1.49
VCAN-203ENST00000343200 NPY4RP50391 375 aa5.71□□□□□ -1.49
VCAN-203ENST00000343200 OR4D2P58180 307 aa5.71□□□□□ -1.49
VCAN-203ENST00000343200 GPM6BQ13491 265 aa5.71□□□□□ -1.49
VCAN-203ENST00000343200 MEPCEQ7L2J0 689 aaKnown RBP5.71□□□□□ -1.49
VCAN-203ENST00000343200 APH1AQ96BI3 265 aa5.71□□□□□ -1.49
VCAN-203ENST00000343200 OR8B4Q96RC9 309 aa5.71□□□□□ -1.49
VCAN-203ENST00000343200 ANKRD66B4E2M5 251 aa5.71□□□□□ -1.49
VCAN-203ENST00000343200 GLCEO94923 617 aa5.71□□□□□ -1.49
VCAN-203ENST00000343200 PMP2P02689 132 aa5.71□□□□□ -1.49
VCAN-203ENST00000343200 CPEP16870 476 aa5.71□□□□□ -1.49
VCAN-203ENST00000343200 SUB1P53999 127 aaKnown RBP eCLIP5.71□□□□□ -1.49
VCAN-203ENST00000343200 PCBD1P61457 104 aa5.71□□□□□ -1.49
VCAN-203ENST00000343200 TSEN54Q7Z6J9 526 aaKnown RBP5.71□□□□□ -1.49
VCAN-203ENST00000343200 LRRTM4Q86VH4 590 aa5.71□□□□□ -1.49
VCAN-203ENST00000343200 KMT5CQ86Y97 462 aa5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms