RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 BATF2Q8N1L9 274 aa13.74□□□□□ -0.21
UBE3B-202ENST00000342494 FAM3DQ96BQ1 224 aa13.74□□□□□ -0.21
UBE3B-202ENST00000342494 GPR173Q9NS66 373 aa13.74□□□□□ -0.21
UBE3B-202ENST00000342494 CLEC1BQ9P126 229 aa13.74□□□□□ -0.21
UBE3B-202ENST00000342494 GNG13Q9P2W3 67 aa13.74□□□□□ -0.21
UBE3B-202ENST00000342494 OSGIN1Q9UJX0 560 aa13.74□□□□□ -0.21
UBE3B-202ENST00000342494 SNX11Q9Y5W9 270 aa13.74□□□□□ -0.21
UBE3B-202ENST00000342494 RGPD5Q99666 1765 aa13.74□□□□□ -0.21
UBE3B-202ENST00000342494 LMO7DNF2Z398 122 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 CTDSP2O14595 271 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 ICOSLGO75144 302 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 MYF5P13349 255 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 IGFBP6P24592 240 aaPredicted RBP13.73□□□□□ -0.21
UBE3B-202ENST00000342494 CMPK2Q5EBM0 449 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 EGFL6Q8IUX8 553 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 NIPSNAP1Q9BPW8 284 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 LAT2Q9GZY6 243 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 BCO1Q9HAY6 547 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.73□□□□□ -0.21
UBE3B-202ENST00000342494 NECAP2Q9NVZ3 263 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 QPCTLQ9NXS2 382 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 ADAMTSL3P82987 1691 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 A0A096LPE4 126 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 A0A1W2PPZ6 126 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 SCAF4O95104 1147 aaKnown RBP13.73□□□□□ -0.21
UBE3B-202ENST00000342494 GDNFP39905 211 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 GPR3P46089 330 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 MTNR1BP49286 362 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 LYPD4Q6UWN0 246 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 FAM96BQ9Y3D0 163 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 E9PI62 339 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 APEHP13798 732 aaKnown RBP13.73□□□□□ -0.21
UBE3B-202ENST00000342494 AGBL4Q5VU57 503 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 OR51A2Q8NGJ7 313 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 NRG4Q8WWG1 115 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 HPSE2Q8WWQ2 592 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 GALNT9Q9HCQ5 603 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 CD300AQ9UGN4 299 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 PSORS1C1Q9UIG5 152 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 FBXO4Q9UKT5 387 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 EXO1Q9UQ84 846 aaKnown RBP13.73□□□□□ -0.21
UBE3B-202ENST00000342494 CRYM-AS1A6NIL9 109 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 SULT1C2O00338 296 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 HSD17B6O14756 317 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 IGLV3-27P01718 113 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 CRYABP02511 175 aaKnown RBP13.73□□□□□ -0.21
UBE3B-202ENST00000342494 MPLP40238 635 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 RAC1P63000 192 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 NKX6-1P78426 367 aaPredicted RBP13.73□□□□□ -0.21
UBE3B-202ENST00000342494 SORDQ00796 357 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 SSX2Q16385 188 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 NKAIN4Q8IVV8 208 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 FAM185AQ8N0U4 392 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 ASIC5Q9NY37 505 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 C5P01031 1676 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 IGHV3-64DA0A0J9YX35 117 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 C5orf49A4QMS7 147 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 ABCD4O14678 606 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 THBS1P07996 1170 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 RBP2P50120 134 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 PLA2G7Q13093 441 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 CISD2Q8N5K1 135 aaKnown RBP13.73□□□□□ -0.21
UBE3B-202ENST00000342494 PARP16Q8N5Y8 322 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 ST8SIA1Q92185 356 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 OR52A5Q9H2C5 316 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 ASH2LQ9UBL3 628 aa13.73□□□□□ -0.21
UBE3B-202ENST00000342494 SLC22A20A6NK97 555 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 PAPLNO95428 1278 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 CEACAM5P06731 702 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 GABRG2P18507 467 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 SERPINF1P36955 418 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 ZNF74Q16587 644 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 SAXO2Q658L1 398 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 GIMAP1Q8WWP7 306 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 PLEKHF2Q9H8W4 249 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 PDFQ9HBH1 243 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 SPACA1Q9HBV2 294 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 ANKRD12Q6UB98 2062 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 SPTY2D1-AS1A0A0U1RR47 76 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 LOC100289279A0A1B0GTE1 492 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 SLC16A6O15403 523 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 TMPRSS11DO60235 418 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 SCG5P05408 212 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 MMP11P24347 488 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 NPBWR1P48145 328 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 IHHQ14623 411 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 ANKRD16Q6P6B7 361 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 TMEM207Q6UWW9 146 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 BCDIN3DQ7Z5W3 292 aaKnown RBP13.72□□□□□ -0.21
UBE3B-202ENST00000342494 OR10J5Q8NHC4 309 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 C16orf52Q8NHV5 167 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 TCTEX1D2Q8WW35 142 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 OR2M2Q96R28 347 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 OR11A1Q9GZK7 315 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 HRH4Q9H3N8 390 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 KIAA1456Q9P272 454 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 GMPR2Q9P2T1 348 aaKnown RBP13.72□□□□□ -0.21
UBE3B-202ENST00000342494 PPT2Q9UMR5 302 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 ETV7Q9Y603 341 aa13.72□□□□□ -0.21
UBE3B-202ENST00000342494 LRP5LA4QPB2 252 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms