RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 ALG10Q5BKT4 473 aa9.74□□□□□ -0.85
RTN3-201ENST00000338850 FCRLBQ6BAA4 426 aa9.74□□□□□ -0.85
RTN3-201ENST00000338850 LRRTM1Q86UE6 522 aa9.74□□□□□ -0.85
RTN3-201ENST00000338850 ZNF227Q86WZ6 799 aa9.74□□□□□ -0.85
RTN3-201ENST00000338850 DTX1Q86Y01 620 aa9.74□□□□□ -0.85
RTN3-201ENST00000338850 DND1Q8IYX4 353 aaKnown RBP9.74□□□□□ -0.85
RTN3-201ENST00000338850 OR4N2Q8NGD1 307 aa9.74□□□□□ -0.85
RTN3-201ENST00000338850 OR5AK2Q8NH90 309 aa9.74□□□□□ -0.85
RTN3-201ENST00000338850 MOSPD2Q8NHP6 518 aa9.74□□□□□ -0.85
RTN3-201ENST00000338850 OR2A7Q96R45 310 aa9.74□□□□□ -0.85
RTN3-201ENST00000338850 B3GNT4Q9C0J1 378 aa9.74□□□□□ -0.85
RTN3-201ENST00000338850 COMMD4Q9H0A8 199 aa9.74□□□□□ -0.85
RTN3-201ENST00000338850 CLEC4MQ9H2X3 399 aaPredicted RBP9.74□□□□□ -0.85
RTN3-201ENST00000338850 TCF7L1Q9HCS4 588 aa9.74□□□□□ -0.85
RTN3-201ENST00000338850 FAM60AQ9NP50 221 aa9.74□□□□□ -0.85
RTN3-201ENST00000338850 MRM2Q9UI43 246 aaKnown RBP9.74□□□□□ -0.85
RTN3-201ENST00000338850 ZNF222Q9UK12 451 aa9.74□□□□□ -0.85
RTN3-201ENST00000338850 NUP50Q9UKX7 468 aa9.74□□□□□ -0.85
RTN3-201ENST00000338850 ERVK-19Q9WJR5 959 aa9.74□□□□□ -0.85
RTN3-201ENST00000338850 ADAM18Q9Y3Q7 739 aa9.74□□□□□ -0.85
RTN3-201ENST00000338850 OR10H1Q9Y4A9 318 aa9.74□□□□□ -0.85
RTN3-201ENST00000338850 FKBP7Q9Y680 259 aa9.74□□□□□ -0.85
RTN3-201ENST00000338850 TENM4Q6N022 2769 aa9.74□□□□□ -0.85
RTN3-201ENST00000338850 IGHV1OR21-1A0A087WYE8 117 aa9.73□□□□□ -0.85
RTN3-201ENST00000338850 IGKV3D-11A0A0A0MRZ8 115 aa9.73□□□□□ -0.85
RTN3-201ENST00000338850 RPS10-NUDT3A0A1W2PQS6 291 aa9.73□□□□□ -0.85
RTN3-201ENST00000338850 TLCD2A6NGC4 264 aa9.73□□□□□ -0.85
RTN3-201ENST00000338850 NPIPB13A6NJU9 1138 aa9.73□□□□□ -0.85
RTN3-201ENST00000338850 NPIPB4C9JG80 1138 aa9.73□□□□□ -0.85
RTN3-201ENST00000338850 G3V3Q6 166 aa9.73□□□□□ -0.85
RTN3-201ENST00000338850 H7C417 338 aa9.73□□□□□ -0.85
RTN3-201ENST00000338850 XRCC3O43542 346 aa9.73□□□□□ -0.85
RTN3-201ENST00000338850 ICMTO60725 284 aa9.73□□□□□ -0.85
RTN3-201ENST00000338850 CSF1P09603 554 aa9.73□□□□□ -0.85
RTN3-201ENST00000338850 FSTP19883 344 aa9.73□□□□□ -0.85
RTN3-201ENST00000338850 ALOX5APP20292 161 aa9.73□□□□□ -0.85
RTN3-201ENST00000338850 PTNP21246 168 aa9.73□□□□□ -0.85
RTN3-201ENST00000338850 CD82P27701 267 aa9.73□□□□□ -0.85
RTN3-201ENST00000338850 CSF2RBP32927 897 aa9.73□□□□□ -0.85
RTN3-201ENST00000338850 P2RX1P51575 399 aa9.73□□□□□ -0.85
RTN3-201ENST00000338850 DLX5P56178 289 aa9.73□□□□□ -0.85
RTN3-201ENST00000338850 NANOS3P60323 173 aaKnown RBP9.73□□□□□ -0.85
RTN3-201ENST00000338850 TRA2AQ13595 282 aaKnown RBP eCLIP9.73□□□□□ -0.85
RTN3-201ENST00000338850 ZNF267Q14586 743 aaPredicted RBP9.73□□□□□ -0.85
RTN3-201ENST00000338850 TMEM69Q5SWH9 247 aa9.73□□□□□ -0.85
RTN3-201ENST00000338850 NKAIN2Q5VXU1 208 aa9.73□□□□□ -0.85
RTN3-201ENST00000338850 ZNF626Q68DY1 528 aa9.73□□□□□ -0.85
RTN3-201ENST00000338850 LEG1Q6P5S2 330 aa9.73□□□□□ -0.85
RTN3-201ENST00000338850 VASH2Q86V25 355 aa9.73□□□□□ -0.85
RTN3-201ENST00000338850 DNAAF1Q8NEP3 725 aa9.73□□□□□ -0.85
RTN3-201ENST00000338850 MCHR2Q969V1 340 aa9.73□□□□□ -0.85
RTN3-201ENST00000338850 CCDC74BQ96LY2 380 aa9.73□□□□□ -0.85
RTN3-201ENST00000338850 ZFP3Q96NJ6 502 aa9.73□□□□□ -0.85
RTN3-201ENST00000338850 PDCD1LG2Q9BQ51 273 aa9.73□□□□□ -0.85
RTN3-201ENST00000338850 ALX4Q9H161 411 aaPredicted RBP9.73□□□□□ -0.85
RTN3-201ENST00000338850 AUNIPQ9H7T9 357 aa9.73□□□□□ -0.85
RTN3-201ENST00000338850 LIN7BQ9HAP6 207 aa9.73□□□□□ -0.85
RTN3-201ENST00000338850 MYOZ1Q9NP98 299 aaPredicted RBP9.73□□□□□ -0.85
RTN3-201ENST00000338850 MTFP1Q9UDX5 166 aa9.73□□□□□ -0.85
RTN3-201ENST00000338850 OR5V1Q9UGF6 321 aa9.73□□□□□ -0.85
RTN3-201ENST00000338850 KIF25Q9UIL4 384 aa9.73□□□□□ -0.85
RTN3-201ENST00000338850 DTX4Q9Y2E6 619 aa9.73□□□□□ -0.85
RTN3-201ENST00000338850 EXPH5Q8NEV8 1989 aa9.73□□□□□ -0.85
RTN3-201ENST00000338850 SPTA1P02549 2419 aa9.73□□□□□ -0.85
RTN3-201ENST00000338850 TLN1Q9Y490 2541 aaKnown RBP9.73□□□□□ -0.85
RTN3-201ENST00000338850 ASH1LQ9NR48 2969 aaKnown RBP9.72□□□□□ -0.85
RTN3-201ENST00000338850 A0A0A6YYC8 382 aaPredicted RBP9.72□□□□□ -0.85
RTN3-201ENST00000338850 OR2M5A3KFT3 312 aa9.72□□□□□ -0.85
RTN3-201ENST00000338850 HMSDA8MTL9 139 aa9.72□□□□□ -0.85
RTN3-201ENST00000338850 I3L1I5 382 aaPredicted RBP9.72□□□□□ -0.85
RTN3-201ENST00000338850 SCDO00767 359 aa9.72□□□□□ -0.85
RTN3-201ENST00000338850 CREBL2O60519 120 aaPredicted RBP9.72□□□□□ -0.85
RTN3-201ENST00000338850 CRYZL1O95825 349 aa9.72□□□□□ -0.85
RTN3-201ENST00000338850 IGKV3-11P04433 115 aa9.72□□□□□ -0.85
RTN3-201ENST00000338850 ANKRD34CP0C6C1 535 aa9.72□□□□□ -0.85
RTN3-201ENST00000338850 ATXN8OSP0DMR3 200 aa9.72□□□□□ -0.85
RTN3-201ENST00000338850 WT1P19544 449 aaPredicted RBP9.72□□□□□ -0.85
RTN3-201ENST00000338850 CXCL3P19876 107 aa9.72□□□□□ -0.85
RTN3-201ENST00000338850 RORAP35398 523 aa9.72□□□□□ -0.85
RTN3-201ENST00000338850 CDKN2AP42771 156 aaKnown RBP9.72□□□□□ -0.85
RTN3-201ENST00000338850 TAS2R20P59543 309 aa9.72□□□□□ -0.85
RTN3-201ENST00000338850 CTXN1P60606 82 aa9.72□□□□□ -0.85
RTN3-201ENST00000338850 ZP1P60852 638 aa9.72□□□□□ -0.85
RTN3-201ENST00000338850 ERVK-25P63136 954 aa9.72□□□□□ -0.85
RTN3-201ENST00000338850 ROM1Q03395 351 aa9.72□□□□□ -0.85
RTN3-201ENST00000338850 EGR4Q05215 589 aa9.72□□□□□ -0.85
RTN3-201ENST00000338850 SNTA1Q13424 505 aa9.72□□□□□ -0.85
RTN3-201ENST00000338850 MADCAM1Q13477 382 aa9.72□□□□□ -0.85
RTN3-201ENST00000338850 GRM7Q14831 915 aa9.72□□□□□ -0.85
RTN3-201ENST00000338850 RBMS2Q15434 407 aaKnown RBP9.72□□□□□ -0.85
RTN3-201ENST00000338850 GRK1Q15835 563 aa9.72□□□□□ -0.85
RTN3-201ENST00000338850 LINC00303Q3SY05 128 aa9.72□□□□□ -0.85
RTN3-201ENST00000338850 LGALSLQ3ZCW2 172 aaPredicted RBP9.72□□□□□ -0.85
RTN3-201ENST00000338850 TMEM164Q5U3C3 297 aa9.72□□□□□ -0.85
RTN3-201ENST00000338850 YOD1Q5VVQ6 348 aaPredicted RBP9.72□□□□□ -0.85
RTN3-201ENST00000338850 LIPNQ5VXI9 398 aa9.72□□□□□ -0.85
RTN3-201ENST00000338850 B3GNTL1Q67FW5 361 aaPredicted RBP9.72□□□□□ -0.85
RTN3-201ENST00000338850 SIGIRRQ6IA17 410 aa9.72□□□□□ -0.85
RTN3-201ENST00000338850 ANKRD16Q6P6B7 361 aa9.72□□□□□ -0.85
RTN3-201ENST00000338850 ELMOD2Q8IZ81 293 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms