RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 NABP1Q96AH0 204 aa11.43□□□□□ -0.58
NUDCD3-201ENST00000338427 ZNF275Q9NSD4 429 aaPredicted RBP11.43□□□□□ -0.58
NUDCD3-201ENST00000338427 MAN2C1Q9NTJ4 1040 aa11.43□□□□□ -0.58
NUDCD3-201ENST00000338427 SLC7A8Q9UHI5 535 aa11.43□□□□□ -0.58
NUDCD3-201ENST00000338427 TMEFF2Q9UIK5 374 aaPredicted RBP11.43□□□□□ -0.58
NUDCD3-201ENST00000338427 CACNG2Q9Y698 323 aa11.43□□□□□ -0.58
NUDCD3-201ENST00000338427 CAPN7Q9Y6W3 813 aa11.43□□□□□ -0.58
NUDCD3-201ENST00000338427 TRAV27A0A087WT01 109 aa11.42□□□□□ -0.58
NUDCD3-201ENST00000338427 BBIP1A8MTZ0 92 aa11.42□□□□□ -0.58
NUDCD3-201ENST00000338427 H7C1C5 153 aa11.42□□□□□ -0.58
NUDCD3-201ENST00000338427 IFNA14P01570 189 aa11.42□□□□□ -0.58
NUDCD3-201ENST00000338427 COX4I1P13073 169 aa11.42□□□□□ -0.58
NUDCD3-201ENST00000338427 ZNF250P15622 560 aa11.42□□□□□ -0.58
NUDCD3-201ENST00000338427 NCK1P16333 377 aa11.42□□□□□ -0.58
NUDCD3-201ENST00000338427 LSP1P33241 339 aa11.42□□□□□ -0.58
NUDCD3-201ENST00000338427 MPV17P39210 176 aa11.42□□□□□ -0.58
NUDCD3-201ENST00000338427 WNT5AP41221 380 aa11.42□□□□□ -0.58
NUDCD3-201ENST00000338427 GPR6P46095 362 aaPredicted RBP11.42□□□□□ -0.58
NUDCD3-201ENST00000338427 ZNF133P52736 654 aaPredicted RBP11.42□□□□□ -0.58
NUDCD3-201ENST00000338427 CDH15P55291 814 aa11.42□□□□□ -0.58
NUDCD3-201ENST00000338427 LCN6P62502 163 aa11.42□□□□□ -0.58
NUDCD3-201ENST00000338427 ERVK-25P63136 954 aa11.42□□□□□ -0.58
NUDCD3-201ENST00000338427 PSG4Q00888 419 aa11.42□□□□□ -0.58
NUDCD3-201ENST00000338427 CD47Q08722 323 aa11.42□□□□□ -0.58
NUDCD3-201ENST00000338427 MAPRE2Q15555 327 aa11.42□□□□□ -0.58
NUDCD3-201ENST00000338427 TSTQ16762 297 aaKnown RBP11.42□□□□□ -0.58
NUDCD3-201ENST00000338427 NKPD1Q17RQ9 610 aa11.42□□□□□ -0.58
NUDCD3-201ENST00000338427 SLC36A2Q495M3 483 aa11.42□□□□□ -0.58
NUDCD3-201ENST00000338427 SPRNQ5BIV9 151 aa11.42□□□□□ -0.58
NUDCD3-201ENST00000338427 ALG10Q5BKT4 473 aa11.42□□□□□ -0.58
NUDCD3-201ENST00000338427 THEM4Q5T1C6 240 aa11.42□□□□□ -0.58
NUDCD3-201ENST00000338427 C10orf128Q5T292 105 aa11.42□□□□□ -0.58
NUDCD3-201ENST00000338427 AVPI1Q5T686 147 aa11.42□□□□□ -0.58
NUDCD3-201ENST00000338427 UGT2A3Q6UWM9 527 aa11.42□□□□□ -0.58
NUDCD3-201ENST00000338427 NRMQ8IXM6 262 aa11.42□□□□□ -0.58
NUDCD3-201ENST00000338427 OR1J1Q8NGS3 322 aa11.42□□□□□ -0.58
NUDCD3-201ENST00000338427 SYNPRQ8TBG9 265 aa11.42□□□□□ -0.58
NUDCD3-201ENST00000338427 BPIFA2Q96DR5 249 aa11.42□□□□□ -0.58
NUDCD3-201ENST00000338427 TXNIPQ9H3M7 391 aa11.42□□□□□ -0.58
NUDCD3-201ENST00000338427 SIAEQ9HAT2 523 aa11.42□□□□□ -0.58
NUDCD3-201ENST00000338427 FBXO9Q9UK97 447 aaPredicted RBP11.42□□□□□ -0.58
NUDCD3-201ENST00000338427 A0A087WUU8 490 aa11.41□□□□□ -0.58
NUDCD3-201ENST00000338427 IQCMA0A1B0GVH7 501 aa11.41□□□□□ -0.58
NUDCD3-201ENST00000338427 C17orf100A8MU93 164 aa11.41□□□□□ -0.58
NUDCD3-201ENST00000338427 CXCR6O00574 342 aa11.41□□□□□ -0.58
NUDCD3-201ENST00000338427 NME4O00746 187 aa11.41□□□□□ -0.58
NUDCD3-201ENST00000338427 IMPA2O14732 288 aa11.41□□□□□ -0.58
NUDCD3-201ENST00000338427 PPIHO43447 177 aaKnown RBP11.41□□□□□ -0.58
NUDCD3-201ENST00000338427 RP2O75695 350 aa11.41□□□□□ -0.58
NUDCD3-201ENST00000338427 ZNF682O95780 498 aa11.41□□□□□ -0.58
NUDCD3-201ENST00000338427 NGFP01138 241 aa11.41□□□□□ -0.58
NUDCD3-201ENST00000338427 THRBP10828 461 aa11.41□□□□□ -0.58
NUDCD3-201ENST00000338427 ZNF26P17031 533 aaPredicted RBP11.41□□□□□ -0.58
NUDCD3-201ENST00000338427 LAP3P28838 519 aa11.41□□□□□ -0.58
NUDCD3-201ENST00000338427 DAP3P51398 398 aaKnown RBP11.41□□□□□ -0.58
NUDCD3-201ENST00000338427 RPL27P61353 136 aaKnown RBP11.41□□□□□ -0.58
NUDCD3-201ENST00000338427 LMO4P61968 165 aa11.41□□□□□ -0.58
NUDCD3-201ENST00000338427 MRPS34P82930 218 aaKnown RBP11.41□□□□□ -0.58
NUDCD3-201ENST00000338427 MVKQ03426 396 aa11.41□□□□□ -0.58
NUDCD3-201ENST00000338427 HSF2Q03933 536 aa11.41□□□□□ -0.58
NUDCD3-201ENST00000338427 PLP2Q04941 152 aa11.41□□□□□ -0.58
NUDCD3-201ENST00000338427 ST3GAL3Q11203 375 aa11.41□□□□□ -0.58
NUDCD3-201ENST00000338427 TBC1D28Q2M2D7 210 aa11.41□□□□□ -0.58
NUDCD3-201ENST00000338427 ZNF101Q8IZC7 436 aa11.41□□□□□ -0.58
NUDCD3-201ENST00000338427 OR13C2Q8NGS9 318 aa11.41□□□□□ -0.58
NUDCD3-201ENST00000338427 ZNF519Q8TB69 540 aa11.41□□□□□ -0.58
NUDCD3-201ENST00000338427 C11orf40Q8WZ69 217 aa11.41□□□□□ -0.58
NUDCD3-201ENST00000338427 POM121L2Q96KW2 1035 aa11.41□□□□□ -0.58
NUDCD3-201ENST00000338427 FNDC11Q9BVV2 318 aa11.41□□□□□ -0.58
NUDCD3-201ENST00000338427 RACGAP1Q9H0H5 632 aa11.41□□□□□ -0.58
NUDCD3-201ENST00000338427 WNT5BQ9H1J7 359 aa11.41□□□□□ -0.58
NUDCD3-201ENST00000338427 HINT3Q9NQE9 182 aaKnown RBP11.41□□□□□ -0.58
NUDCD3-201ENST00000338427 FBXL3Q9UKT7 428 aa11.41□□□□□ -0.58
NUDCD3-201ENST00000338427 HIF3AQ9Y2N7 669 aa11.41□□□□□ -0.58
NUDCD3-201ENST00000338427 STAB1Q9NY15 2570 aa11.41□□□□□ -0.58
NUDCD3-201ENST00000338427 IGLV3-9A0A075B6K5 115 aa11.4□□□□□ -0.58
NUDCD3-201ENST00000338427 C5orf49A4QMS7 147 aa11.4□□□□□ -0.58
NUDCD3-201ENST00000338427 CDC42EP2O14613 210 aa11.4□□□□□ -0.58
NUDCD3-201ENST00000338427 SAGP10523 405 aaPredicted RBP11.4□□□□□ -0.58
NUDCD3-201ENST00000338427 STOMP27105 288 aa11.4□□□□□ -0.58
NUDCD3-201ENST00000338427 APLNRP35414 380 aa11.4□□□□□ -0.58
NUDCD3-201ENST00000338427 RAD52P43351 418 aa11.4□□□□□ -0.58
NUDCD3-201ENST00000338427 GPR4P46093 362 aa11.4□□□□□ -0.58
NUDCD3-201ENST00000338427 GSK3BP49841 420 aa11.4□□□□□ -0.58
NUDCD3-201ENST00000338427 SLC7A2P52569 658 aa11.4□□□□□ -0.58
NUDCD3-201ENST00000338427 KLF3P57682 345 aaPredicted RBP11.4□□□□□ -0.58
NUDCD3-201ENST00000338427 RPS23P62266 143 aaKnown RBP11.4□□□□□ -0.58
NUDCD3-201ENST00000338427 PRKCDQ05655 676 aa11.4□□□□□ -0.58
NUDCD3-201ENST00000338427 DBPQ10586 325 aaPredicted RBP11.4□□□□□ -0.58
NUDCD3-201ENST00000338427 ZNF774Q6NX45 483 aa11.4□□□□□ -0.58
NUDCD3-201ENST00000338427 RINLQ6ZS11 566 aa11.4□□□□□ -0.58
NUDCD3-201ENST00000338427 ZNF771Q7L3S4 317 aaPredicted RBP11.4□□□□□ -0.58
NUDCD3-201ENST00000338427 OR1J2Q8NGS2 313 aa11.4□□□□□ -0.58
NUDCD3-201ENST00000338427 RP9Q8TA86 221 aaKnown RBP11.4□□□□□ -0.58
NUDCD3-201ENST00000338427 HPS1Q92902 700 aa11.4□□□□□ -0.58
NUDCD3-201ENST00000338427 PRRC1Q96M27 445 aa11.4□□□□□ -0.58
NUDCD3-201ENST00000338427 RBP7Q96R05 134 aa11.4□□□□□ -0.58
NUDCD3-201ENST00000338427 C19orf24Q9BVV8 132 aa11.4□□□□□ -0.58
NUDCD3-201ENST00000338427 POLR2J2Q9GZM3 115 aaKnown RBP11.4□□□□□ -0.58
NUDCD3-201ENST00000338427 POLR2J3Q9H1A7 115 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms