RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 ZNF626Q68DY1 528 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 TXNRD3NBQ6F5E7 133 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 OR5AP2Q8NGF4 316 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 SEC11CQ9BY50 192 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 WDR76Q9H967 626 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 RGS13O14921 159 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 TBX18O95935 607 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 PPOXP50336 477 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 TFAP2EQ6VUC0 442 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 CLECL1Q8IZS7 167 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 ZFPM2Q8WW38 1151 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 RPUSD4Q96CM3 377 aaKnown RBP5.72□□□□□ -1.49
CSMD1-201ENST00000335551 CLMPQ9H6B4 373 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 LRRC37A3O60309 1634 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 CRYM-AS1A6NIL9 109 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 DBX1A6NMT0 343 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 HSBP1O75506 76 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 AKR1C3P42330 323 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 SDR9C7Q8NEX9 313 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 CAPNS2Q96L46 248 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 SLC6A18Q96N87 628 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 ALOXE3Q9BYJ1 711 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 UBQLN4Q9NRR5 601 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 MED16Q9Y2X0 877 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 A0A1B0GV72 72 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 TMEM129A0AVI4 362 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 CSF2RAP15509 400 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 NKX2-1P43699 371 aaPredicted RBP5.72□□□□□ -1.49
CSMD1-201ENST00000335551 ERVFC1-1P60608 527 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 SRYQ05066 204 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 ZNF528Q3MIS6 628 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 OR51S1Q8NGJ8 323 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 AKR1E2Q96JD6 320 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 NKX2-4Q9H2Z4 354 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 RIMS4Q9H426 269 aaPredicted RBP5.72□□□□□ -1.49
CSMD1-201ENST00000335551 SIRT3Q9NTG7 399 aaPredicted RBP5.72□□□□□ -1.49
CSMD1-201ENST00000335551 PXDNQ92626 1479 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 OR5K3A6NET4 321 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 C5orf52A6NGY3 159 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 C4orf47A7E2U8 309 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 RRASP10301 218 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 APEX1P27695 318 aaKnown RBP5.72□□□□□ -1.49
CSMD1-201ENST00000335551 SDHAP31040 664 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 ERVPABLB-1P60509 514 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 RTL8BQ17RB0 113 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 STUMQ69YW2 141 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 WDR74Q6RFH5 385 aaPredicted RBP5.72□□□□□ -1.49
CSMD1-201ENST00000335551 NPSR1Q6W5P4 371 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 ISCA2Q86U28 154 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 IKZF4Q9H2S9 585 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 MRPS28Q9Y2Q9 187 aaKnown RBP5.72□□□□□ -1.49
CSMD1-201ENST00000335551 RGPD2P0DJD1 1756 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 M0QYG6 137 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 SIGLEC6O43699 453 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 LEFTY1O75610 366 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 GCSHP23434 173 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 FLT3LGP49771 235 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 EPHA5P54756 1037 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 PHLDA2Q53GA4 152 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 LETMD1Q6P1Q0 360 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 GABARAPL1Q9H0R8 117 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 B3GAT1Q9P2W7 334 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 SDK2Q58EX2 2172 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 FEZF1A0PJY2 475 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 CLDN20P56880 219 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 NHLH1Q02575 133 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 NHLH2Q02577 135 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 OR1Q1Q15612 314 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 SLC14A2Q15849 920 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 NHSL2Q5HYW2 709 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 GLYATL3Q5SZD4 288 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 CDHR3Q6ZTQ4 885 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 UMODL1-AS1Q8N2C9 162 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 EIF4E3Q8N5X7 224 aaKnown RBP5.72□□□□□ -1.49
CSMD1-201ENST00000335551 ZNF566Q969W8 418 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 GPR78Q96P69 363 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 SLC22A12Q96S37 553 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 NXF5Q9H1B4 397 aaKnown RBP5.72□□□□□ -1.49
CSMD1-201ENST00000335551 SUSD2Q9UGT4 822 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 A0A0B4J203 849 aa5.71□□□□□ -1.49
CSMD1-201ENST00000335551 ZNF354AO60765 605 aaPredicted RBP5.71□□□□□ -1.49
CSMD1-201ENST00000335551 T-ENOLP0DO92 83 aa5.71□□□□□ -1.49
CSMD1-201ENST00000335551 EMP3P54852 163 aa5.71□□□□□ -1.49
CSMD1-201ENST00000335551 RING1Q06587 406 aa5.71□□□□□ -1.49
CSMD1-201ENST00000335551 TSPAN31Q12999 210 aa5.71□□□□□ -1.49
CSMD1-201ENST00000335551 ENTPD8Q5MY95 495 aa5.71□□□□□ -1.49
CSMD1-201ENST00000335551 ZNF573Q86YE8 665 aa5.71□□□□□ -1.49
CSMD1-201ENST00000335551 PIGQQ9BRB3 760 aa5.71□□□□□ -1.49
CSMD1-201ENST00000335551 DHRS4Q9BTZ2 278 aa5.71□□□□□ -1.49
CSMD1-201ENST00000335551 OR1A1Q9P1Q5 309 aa5.71□□□□□ -1.49
CSMD1-201ENST00000335551 GPR45Q9Y5Y3 372 aa5.71□□□□□ -1.49
CSMD1-201ENST00000335551 SERTM2A0A1B0GWG4 89 aa5.71□□□□□ -1.49
CSMD1-201ENST00000335551 A0A1W2PPH5 198 aa5.71□□□□□ -1.49
CSMD1-201ENST00000335551 H3BML4 177 aa5.71□□□□□ -1.49
CSMD1-201ENST00000335551 PMCHP20382 165 aa5.71□□□□□ -1.49
CSMD1-201ENST00000335551 CNN1P51911 297 aaKnown RBP5.71□□□□□ -1.49
CSMD1-201ENST00000335551 RNASEKQ6P5S7 137 aaKnown RBP5.71□□□□□ -1.49
CSMD1-201ENST00000335551 GPR150Q8NGU9 434 aa5.71□□□□□ -1.49
CSMD1-201ENST00000335551 PINX1Q96BK5 328 aaKnown RBP5.71□□□□□ -1.49
CSMD1-201ENST00000335551 SH3BGRL2Q9UJC5 107 aa5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms