RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 RADILQ96JH8 1075 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 DCBLD2Q96PD2 775 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 PRR14Q9BWN1 585 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 SPAARA0A1B0GVQ0 90 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 OR2W5A6NFC9 320 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 J3QRK9 145 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 PRAF2O60831 178 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 RBMXL2O75526 392 aaKnown RBP6.22□□□□□ -1.41
SF3B1-201ENST00000335508 VAMP1P23763 118 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 CASP3P42574 277 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 CLDN15P56746 228 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 C12orf73Q69YU5 71 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 TMEM81Q6P7N7 255 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 TMEM205Q6UW68 189 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 PTPMT1Q8WUK0 201 aaPredicted RBP6.22□□□□□ -1.41
SF3B1-201ENST00000335508 DEDD2Q8WXF8 326 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 LMF1Q96S06 567 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 ZNF442Q9H7R0 627 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 PRMT8Q9NR22 394 aaPredicted RBP6.22□□□□□ -1.41
SF3B1-201ENST00000335508 ERVK13-1Q9NX77 482 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 CAMK2AQ9UQM7 478 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 BOLA2-SMG1P6H3BVE0 249 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 SULT1B1O43704 296 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 MYF5P13349 255 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 AKR1D1P51857 326 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 C6orf183Q5T699 404 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 SPERTQ8NA61 448 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 OR56B1Q8NGI3 324 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 GPR119Q8TDV5 335 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 SMOC1Q9H4F8 434 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 KCNIP1Q9NZI2 227 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 A0A0A6YYH2 397 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 TEX13DA0A0J9YY54 714 aaPredicted RBP6.22□□□□□ -1.41
SF3B1-201ENST00000335508 A0A1W2PQL4 384 aaPredicted RBP6.22□□□□□ -1.41
SF3B1-201ENST00000335508 FUOMA2VDF0 154 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 A6NJ64 397 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 FAM171A2A8MVW0 826 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 SMAD9O15198 467 aaKnown RBP6.22□□□□□ -1.41
SF3B1-201ENST00000335508 MPIG6BO95866 241 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 CT62P0C5K7 136 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 CD79AP11912 226 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 CD97P48960 835 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 RBM39Q14498 530 aaKnown RBP6.22□□□□□ -1.41
SF3B1-201ENST00000335508 SHBQ15464 509 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 ZNF181Q2M3W8 571 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 ABCA11PQ4W5N1 156 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 C1QTNF12Q5T7M4 302 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 ZNF565Q8N9K5 539 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 OR52N5Q8NH56 324 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 FCAMRQ8WWV6 532 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 C11orf40Q8WZ69 217 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 NECAB3Q96P71 396 aaPredicted RBP6.22□□□□□ -1.41
SF3B1-201ENST00000335508 OPA3Q9H6K4 179 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 TMEM74BQ9NUR3 256 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 OCIAD1Q9NX40 245 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 GLTPQ9NZD2 209 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 SEMA5BQ9P283 1151 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 MALT1Q9UDY8 824 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 B9D1Q9UPM9 204 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 CMAHPQ9Y471 501 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 TRAV18A0A075B6X5 111 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 ACTL6AO96019 429 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 MRPS34P82930 218 aaKnown RBP6.22□□□□□ -1.41
SF3B1-201ENST00000335508 RIN1Q13671 783 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 OLFML2AQ68BL7 652 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 PGAP1Q75T13 922 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 DOK3Q7L591 496 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 LANCL2Q9NS86 450 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 SLC22A11Q9NSA0 550 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 GHRLQ9UBU3 117 aa6.22□□□□□ -1.41
SF3B1-201ENST00000335508 LRRC37A2A6NM11 1700 aa6.21□□□□□ -1.41
SF3B1-201ENST00000335508 ZNF638Q14966 1978 aaKnown RBP6.21□□□□□ -1.41
SF3B1-201ENST00000335508 NPIPB13A6NJU9 1138 aa6.21□□□□□ -1.41
SF3B1-201ENST00000335508 NPIPB4C9JG80 1138 aa6.21□□□□□ -1.41
SF3B1-201ENST00000335508 IGKV3-11P04433 115 aa6.21□□□□□ -1.41
SF3B1-201ENST00000335508 CSF2RBP32927 897 aa6.21□□□□□ -1.41
SF3B1-201ENST00000335508 NR4A2P43354 598 aa6.21□□□□□ -1.41
SF3B1-201ENST00000335508 ZNF136P52737 540 aa6.21□□□□□ -1.41
SF3B1-201ENST00000335508 ZFP69Q49AA0 526 aa6.21□□□□□ -1.41
SF3B1-201ENST00000335508 UTS2BQ765I0 119 aa6.21□□□□□ -1.41
SF3B1-201ENST00000335508 SLC22A24Q8N4F4 322 aa6.21□□□□□ -1.41
SF3B1-201ENST00000335508 NANOGP1Q8N7R0 232 aa6.21□□□□□ -1.41
SF3B1-201ENST00000335508 OR10G3Q8NGC4 313 aa6.21□□□□□ -1.41
SF3B1-201ENST00000335508 LIPHQ8WWY8 451 aa6.21□□□□□ -1.41
SF3B1-201ENST00000335508 GUCD1Q96NT3 240 aa6.21□□□□□ -1.41
SF3B1-201ENST00000335508 ATF6BQ99941 703 aa6.21□□□□□ -1.41
SF3B1-201ENST00000335508 OR51E2Q9H255 320 aa6.21□□□□□ -1.41
SF3B1-201ENST00000335508 APMAPQ9HDC9 416 aa6.21□□□□□ -1.41
SF3B1-201ENST00000335508 C19orf67A6NJJ6 358 aa6.21□□□□□ -1.42
SF3B1-201ENST00000335508 ATG12O94817 140 aa6.21□□□□□ -1.42
SF3B1-201ENST00000335508 HIST1H1CP16403 213 aaKnown RBP6.21□□□□□ -1.42
SF3B1-201ENST00000335508 EGR3Q06889 387 aa6.21□□□□□ -1.42
SF3B1-201ENST00000335508 ALKBH1Q13686 389 aaKnown RBP6.21□□□□□ -1.42
SF3B1-201ENST00000335508 GALEQ14376 348 aa6.21□□□□□ -1.42
SF3B1-201ENST00000335508 CDK5R1Q15078 307 aa6.21□□□□□ -1.42
SF3B1-201ENST00000335508 FCRLBQ6BAA4 426 aa6.21□□□□□ -1.42
SF3B1-201ENST00000335508 SLC22A25Q6T423 547 aa6.21□□□□□ -1.42
SF3B1-201ENST00000335508 DRAM2Q6UX65 266 aa6.21□□□□□ -1.42
SF3B1-201ENST00000335508 AKAP14Q86UN6 197 aa6.21□□□□□ -1.42
SF3B1-201ENST00000335508 SFTPA2Q8IWL1 248 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms