RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 LIPCP11150 499 aa21.36■■□□□ 1.01
TSKU-201ENST00000333090 SCGB2B2Q4G0G5 96 aa21.36■■□□□ 1.01
TSKU-201ENST00000333090 CLVS2Q5SYC1 327 aa21.36■■□□□ 1.01
TSKU-201ENST00000333090 GLT8D1Q68CQ7 371 aa21.36■■□□□ 1.01
TSKU-201ENST00000333090 TMEM205Q6UW68 189 aa21.36■■□□□ 1.01
TSKU-201ENST00000333090 KCNRGQ8N5I3 272 aa21.36■■□□□ 1.01
TSKU-201ENST00000333090 SEH1LQ96EE3 360 aa21.36■■□□□ 1.01
TSKU-201ENST00000333090 FOXN4Q96NZ1 517 aa21.36■■□□□ 1.01
TSKU-201ENST00000333090 VRK1Q99986 396 aaPredicted RBP21.36■■□□□ 1.01
TSKU-201ENST00000333090 KXD1Q9BQD3 176 aa21.36■■□□□ 1.01
TSKU-201ENST00000333090 MMP25Q9NPA2 562 aa21.36■■□□□ 1.01
TSKU-201ENST00000333090 FARSAQ9Y285 508 aaKnown RBP21.36■■□□□ 1.01
TSKU-201ENST00000333090 LAMA1P25391 3075 aa21.36■■□□□ 1.01
TSKU-201ENST00000333090 TGFBR3LH3BV60 316 aa21.36■■□□□ 1.01
TSKU-201ENST00000333090 ABCD4O14678 606 aa21.36■■□□□ 1.01
TSKU-201ENST00000333090 FLI1Q01543 452 aaPredicted RBP21.36■■□□□ 1.01
TSKU-201ENST00000333090 RPL18Q07020 188 aaKnown RBP21.36■■□□□ 1.01
TSKU-201ENST00000333090 FGL1Q08830 312 aa21.36■■□□□ 1.01
TSKU-201ENST00000333090 SLC35D2Q76EJ3 337 aa21.36■■□□□ 1.01
TSKU-201ENST00000333090 BCORP1Q8N888 145 aa21.36■■□□□ 1.01
TSKU-201ENST00000333090 OR5M8Q8NGP6 311 aa21.36■■□□□ 1.01
TSKU-201ENST00000333090 RSC1A1Q92681 617 aa21.36■■□□□ 1.01
TSKU-201ENST00000333090 TSPAN32Q96QS1 320 aa21.36■■□□□ 1.01
TSKU-201ENST00000333090 INTS14Q96SY0 518 aa21.36■■□□□ 1.01
TSKU-201ENST00000333090 YBX2Q9Y2T7 364 aaKnown RBP21.36■■□□□ 1.01
TSKU-201ENST00000333090 NOP16Q9Y3C1 178 aaKnown RBP21.36■■□□□ 1.01
TSKU-201ENST00000333090 ALOX12BO75342 701 aa21.35■■□□□ 1.01
TSKU-201ENST00000333090 CSN2P05814 226 aa21.35■■□□□ 1.01
TSKU-201ENST00000333090 IFI6P09912 130 aa21.35■■□□□ 1.01
TSKU-201ENST00000333090 ATXN8OSP0DMR3 200 aa21.35■■□□□ 1.01
TSKU-201ENST00000333090 CT45A8P0DMV1 189 aa21.35■■□□□ 1.01
TSKU-201ENST00000333090 CT45A9P0DMV2 189 aa21.35■■□□□ 1.01
TSKU-201ENST00000333090 EGR3Q06889 387 aa21.35■■□□□ 1.01
TSKU-201ENST00000333090 DHRS2Q13268 280 aa21.35■■□□□ 1.01
TSKU-201ENST00000333090 CT45A2Q5DJT8 189 aa21.35■■□□□ 1.01
TSKU-201ENST00000333090 PABPC1L2AQ5JQF8 200 aa21.35■■□□□ 1.01
TSKU-201ENST00000333090 ATPAF1Q5TC12 328 aaPredicted RBP21.35■■□□□ 1.01
TSKU-201ENST00000333090 PPP1R14AQ96A00 147 aa21.35■■□□□ 1.01
TSKU-201ENST00000333090 SFXN1Q9H9B4 322 aa21.35■■□□□ 1.01
TSKU-201ENST00000333090 COMMD9Q9P000 198 aa21.35■■□□□ 1.01
TSKU-201ENST00000333090 SLC22A13Q9Y226 551 aa21.35■■□□□ 1.01
TSKU-201ENST00000333090 APODP05090 189 aa21.35■■□□□ 1.01
TSKU-201ENST00000333090 APEHP13798 732 aaKnown RBP21.35■■□□□ 1.01
TSKU-201ENST00000333090 LIN54Q6MZP7 749 aa21.35■■□□□ 1.01
TSKU-201ENST00000333090 OR2W3Q7Z3T1 314 aa21.35■■□□□ 1.01
TSKU-201ENST00000333090 ELF4Q99607 663 aaPredicted RBP21.35■■□□□ 1.01
TSKU-201ENST00000333090 SLC25A21Q9BQT8 299 aaPredicted RBP21.35■■□□□ 1.01
TSKU-201ENST00000333090 ELOVL3Q9HB03 270 aa21.35■■□□□ 1.01
TSKU-201ENST00000333090 TNFSF18Q9UNG2 199 aa21.35■■□□□ 1.01
TSKU-201ENST00000333090 CD8AP01732 235 aa21.35■■□□□ 1.01
TSKU-201ENST00000333090 GP1BAP07359 652 aa21.35■■□□□ 1.01
TSKU-201ENST00000333090 CD34P28906 385 aa21.35■■□□□ 1.01
TSKU-201ENST00000333090 PBX2P40425 430 aa21.35■■□□□ 1.01
TSKU-201ENST00000333090 OR1J4Q8NGS1 313 aa21.35■■□□□ 1.01
TSKU-201ENST00000333090 SLC39A1Q9NY26 324 aa21.35■■□□□ 1.01
TSKU-201ENST00000333090 MYEF2Q9P2K5 600 aaKnown RBP21.35■■□□□ 1.01
TSKU-201ENST00000333090 PURGQ9UJV8 347 aaKnown RBP21.35■■□□□ 1.01
TSKU-201ENST00000333090 PCOLCE2Q9UKZ9 415 aa21.35■■□□□ 1.01
TSKU-201ENST00000333090 TMEM14AQ9Y6G1 99 aa21.35■■□□□ 1.01
TSKU-201ENST00000333090 HLA-DQA2P01906 255 aa21.34■■□□□ 1.01
TSKU-201ENST00000333090 FCARP24071 287 aa21.34■■□□□ 1.01
TSKU-201ENST00000333090 PPP1CAP62136 330 aa21.34■■□□□ 1.01
TSKU-201ENST00000333090 ERV3-1Q14264 604 aa21.34■■□□□ 1.01
TSKU-201ENST00000333090 SHEQ5VZ18 495 aa21.34■■□□□ 1.01
TSKU-201ENST00000333090 C11orf87Q6NUJ2 197 aa21.34■■□□□ 1.01
TSKU-201ENST00000333090 OR5T2Q8NGG2 359 aa21.34■■□□□ 1.01
TSKU-201ENST00000333090 ERVK-19Q9WJR5 959 aa21.34■■□□□ 1.01
TSKU-201ENST00000333090 OIP5O43482 229 aa21.34■■□□□ 1.01
TSKU-201ENST00000333090 BCL2L11O43521 198 aa21.34■■□□□ 1.01
TSKU-201ENST00000333090 HLA-AP01891 365 aaKnown RBP21.34■■□□□ 1.01
TSKU-201ENST00000333090 GUSBP08236 651 aa21.34■■□□□ 1.01
TSKU-201ENST00000333090 SSBP1Q04837 148 aaKnown RBP21.34■■□□□ 1.01
TSKU-201ENST00000333090 MEP1BQ16820 701 aa21.34■■□□□ 1.01
TSKU-201ENST00000333090 WBP2NLQ6ICG8 309 aa21.34■■□□□ 1.01
TSKU-201ENST00000333090 CBLN3Q6UW01 205 aa21.34■■□□□ 1.01
TSKU-201ENST00000333090 ATG4DQ86TL0 474 aaPredicted RBP21.34■■□□□ 1.01
TSKU-201ENST00000333090 PM20D2Q8IYS1 436 aa21.34■■□□□ 1.01
TSKU-201ENST00000333090 C16orf52Q8NHV5 167 aa21.34■■□□□ 1.01
TSKU-201ENST00000333090 HRASLS2Q9NWW9 162 aa21.34■■□□□ 1.01
TSKU-201ENST00000333090 C2orf16Q68DN1 1984 aa21.33■■□□□ 1.01
TSKU-201ENST00000333090 SIGLEC6O43699 453 aa21.33■■□□□ 1.01
TSKU-201ENST00000333090 OR2F2O95006 317 aa21.33■■□□□ 1.01
TSKU-201ENST00000333090 CYB5AP00167 134 aa21.33■■□□□ 1.01
TSKU-201ENST00000333090 RENP00797 406 aa21.33■■□□□ 1.01
TSKU-201ENST00000333090 MELTFP08582 738 aa21.33■■□□□ 1.01
TSKU-201ENST00000333090 ZNF28P17035 718 aa21.33■■□□□ 1.01
TSKU-201ENST00000333090 DLSTP36957 453 aa21.33■■□□□ 1.01
TSKU-201ENST00000333090 CENPAP49450 140 aa21.33■■□□□ 1.01
TSKU-201ENST00000333090 EGR4Q05215 589 aa21.33■■□□□ 1.01
TSKU-201ENST00000333090 OR2F1Q13607 317 aa21.33■■□□□ 1.01
TSKU-201ENST00000333090 CD226Q15762 336 aa21.33■■□□□ 1.01
TSKU-201ENST00000333090 STK11Q15831 433 aa21.33■■□□□ 1.01
TSKU-201ENST00000333090 ASPHD2Q6ICH7 369 aa21.33■■□□□ 1.01
TSKU-201ENST00000333090 NDUFAF7Q7L592 441 aa21.33■■□□□ 1.01
TSKU-201ENST00000333090 MNTQ99583 582 aa21.33■■□□□ 1.01
TSKU-201ENST00000333090 A6NCN8 305 aa21.33■■□□□ 1
TSKU-201ENST00000333090 C2orf74A8MZ97 194 aa21.33■■□□□ 1
TSKU-201ENST00000333090 ASAH2BP0C7U1 165 aa21.33■■□□□ 1
TSKU-201ENST00000333090 PNMTP11086 282 aa21.33■■□□□ 1
TSKU-201ENST00000333090 AKR1C2P52895 323 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms